slackbuilds_ponce/academic
R.S.Ananda Murthy 8cb3d2dbd2 academic/fet Updated for version 5.37.5.
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2019-01-26 01:02:09 +07:00
..
abntex
aenig4 academic/aenig4: Updated for version 1.04. 2018-11-03 07:46:38 +07:00
aline
aliview academic/aliview: Updated for version 1.25. 2018-12-24 08:56:07 +07:00
amd academic/amd: Updated for SuiteSparse 5.4.0. 2019-01-05 07:49:27 +07:00
amplicon
amplifx
antiprism
archaeopteryx academic/archaeopteryx: Updated for version 0.9928b. 2018-12-24 08:56:55 +07:00
aris
arka
armadillo academic/armadillo: Updated for version 8.100.0. 2017-10-07 00:34:52 +01:00
arpack
arpack-ng academic/arpack-ng: Updated for version 3.7.0. 2019-01-19 07:20:41 +07:00
artha academic/artha: Mirror download url. 2018-03-06 02:04:16 +07:00
avl
avogadro academic/avogadro: Mirror download url. 2018-03-10 07:11:14 +07:00
bcftools academic/bcftools: Added (BCF calling tools). 2019-01-05 07:49:16 +07:00
bedGraphToBigWig
bedtools academic/bedtools: Updated for version 2.27.1. 2018-01-13 07:13:04 +07:00
biblesync academic/biblesync: Updated for version 2.0.1. 2018-05-01 22:01:17 +01:00
bibletime academic/bibletime: Updated for version 2.11.2. 2018-06-28 22:22:10 +01:00
bibus
boinc academic/boinc: Updated for version 7.14.2. 2018-12-22 08:44:24 +07:00
bowtie
bowtie2 academic/bowtie2: Updated for version 2.3.4.3 + new maintainer. 2019-01-05 07:49:15 +07:00
bowtie2-legacy academic/bowtie2-legacy: Added (aligning sequencing reads). 2018-12-24 08:59:33 +07:00
bpp-core academic/bpp-core: Updated for version 2.4.1. 2018-12-24 09:00:24 +07:00
bpp-phyl academic/bpp-phyl: Updated for version 2.4.1. 2018-12-24 09:01:05 +07:00
bpp-phyl-omics academic/bpp-phyl-omics: Updated for version 2.4.1. 2018-12-24 09:01:40 +07:00
bpp-popgen academic/bpp-popgen: Updated for version 2.4.1. 2018-12-24 09:02:22 +07:00
bpp-seq academic/bpp-seq: Updated for version 2.4.1. 2018-12-24 09:02:59 +07:00
bpp-seq-omics academic/bpp-seq-omics: Updated for version 2.4.1. 2018-12-24 09:03:37 +07:00
bppsuite academic/bppsuite: Updated for version 2.4.1. 2018-12-24 09:04:15 +07:00
btf academic/btf: Updated for SuiteSparse 5.4.0. 2019-01-05 07:49:29 +07:00
bwa academic/bwa: Updated for version 0.7.17. 2018-01-13 07:13:04 +07:00
cadabra2 academic/cadabra2: Fix DOWNLOAD url. 2018-04-27 00:41:02 +07:00
CAFS_divergence
calc academic/calc: Update to 2.12.7.2 2018-12-01 07:27:58 +07:00
calcoo academic/calcoo: Fix ownership. 2017-07-15 07:27:22 +07:00
camd academic/camd: Updated for SuiteSparse 5.4.0. 2019-01-05 07:49:27 +07:00
cap3
CAPS_coevolution
cblas academic/cblas: Updated for version 3.8.0. 2017-12-21 08:19:39 +07:00
ccolamd academic/ccolamd: Updated for SuiteSparse 5.4.0. 2019-01-05 07:49:28 +07:00
celestia
chemtool
cholmod academic/cholmod: Updated for version 3.0.13. 2019-01-05 07:49:29 +07:00
cistrome-CEAS
cistrome-conductGO academic/cistrome-conductGO: Fix ownership. 2017-07-15 07:28:59 +07:00
cistrome-extra academic/cistrome-extra: Updated for version git_20170829_6334683. 2017-10-11 06:19:48 +07:00
cistrome-MACS
cistrome-mdseqpos academic/cistrome-mdseqpos: Updated for v. git_20170829_6334683. 2017-10-11 06:19:48 +07:00
clark-ugene academic/clark-ugene: Added (supervised sequence classification). 2018-12-24 09:09:59 +07:00
cld2 academic/cld2: Fix build on current. 2018-03-17 08:51:42 +07:00
clustalo
clustalw
clustalx
colamd academic/colamd: Updated for SuiteSparse 5.4.0. 2019-01-05 07:49:28 +07:00
convertall
copasi academic/copasi: Fix DOWNLOAD_x86_64. 2018-08-05 02:04:56 +07:00
coq
cryptominisat academic/cryptominisat: Fix MD5SUM. 2018-12-26 02:35:20 +07:00
csparse academic/csparse: Updated for SuiteSparse 5.4.0. 2019-01-05 07:49:28 +07:00
cufflinks academic/cufflinks: Update DEPS. 2019-01-09 07:33:01 +07:00
cutadapt academic/cutadapt: Updated for version 1.14. 2017-10-11 06:19:48 +07:00
cxsparse academic/cxsparse: Updated for SuiteSparse 5.4.0. 2019-01-05 07:49:28 +07:00
dakota academic/dakota: Updated for version 6.8. 2018-06-07 14:33:56 +01:00
Data2FCS
diamond academic/diamond: Added (A sequence aligner). 2018-12-24 09:11:11 +07:00
drawtiming
ds9 academic/ds9: Updated for version 7.6. 2018-05-12 06:58:27 +07:00
easy_spice academic/easy_spice: Use tgz. 2017-08-26 07:20:03 +07:00
edsim51di
EMBASSY
EMBOSS
engauge academic/engauge: Updated for version 10.10. 2018-10-21 06:45:27 +07:00
ent
equalx
ess academic/ess: Updated for version 17.11. 2018-07-27 21:33:34 +07:00
evopedia_qt
exonerate academic/exonerate: Switch to https. 2017-10-26 09:25:14 +07:00
extrema
fann
fastqc academic/fastqc: Updated for version 0.11.8 + new maintainer. 2018-12-22 00:03:06 -09:00
FCSalyzer academic/FCSalyzer: Updated for version 0.9.16_alpha. 2018-12-24 08:54:20 +07:00
fet academic/fet Updated for version 5.37.5. 2019-01-26 01:02:09 +07:00
fiji academic/fiji: Added (ImageJ Distribution). 2018-12-24 22:16:55 +07:00
finchtv academic/finchtv: Updated for version 1.3.1. 2017-10-11 06:19:49 +07:00
fityk
flann
flashqard
flexbar academic/flexbar: Updated for version 3.4.0. 2018-07-07 06:54:16 +07:00
free42 academic/free42: Updated for version 2.0.4. 2017-07-29 17:50:21 +07:00
freechartgeany
g3data
galculator academic/galculator: Fix download url. 2018-03-06 01:27:35 +07:00
gaw3 academic/gaw3: Updated for version 20170716. 2017-12-02 06:30:53 +07:00
Gblocks academic/Gblocks: Fix download url. 2018-03-03 08:42:14 +07:00
gcalctool
gchemutils academic/gchemutils: Updated for version 0.14.17. 2018-07-08 19:28:35 +01:00
gcompris academic/gcompris: Updated for version 17.05. 2017-12-27 18:10:01 -06:00
geda-gaf
gelemental
geneconv academic/geneconv: Switch to https. 2017-12-13 16:05:14 +07:00
genius academic/genius: Updated for version 1.0.23. 2018-02-17 07:42:45 +07:00
genometools academic/genometools: Updated for version 1.5.10. 2018-07-08 19:32:20 +01:00
genpak
GeoGebra academic/GeoGebra: Update homepage. 2018-06-02 07:32:36 +07:00
geomview
gerbv
ggobi
ghemical
glpk
gnucap
gp2fasta academic/gp2fasta: Update HOMEPAGE and DOWNLOAD urls. 2017-08-12 06:58:19 +07:00
gpredict academic/gpredict: Updated for version 2.3. 2019-01-18 23:39:51 +07:00
grace
gresistor
gretl academic/gretl: Updated for version 2017c. 2017-07-29 17:50:22 +07:00
Gridcoin-Research academic/Gridcoin-Research: Updated for version 4.0.1.0. 2018-12-15 09:17:10 +07:00
grpn
gspiceui academic/gspiceui: Updated for version 1.1.00. 2017-09-02 10:19:45 +01:00
gtkwave
gtypist
gwyddion academic/gwyddion: Updated for version 2.52. 2018-11-24 12:35:13 +07:00
HMMER academic/HMMER: Updated for version 3.2.1. 2018-06-17 22:34:10 +01:00
hyphy academic/hyphy: Updated for version 2.3.14. 2018-12-24 22:16:52 +07:00
io_lib
irsim
isoelectric-point academic/isoelectric-point: Update homepage and download. 2018-12-01 07:27:43 +07:00
iTest
itex2mml academic/itex2mml: Remove obsolete patch. 2017-11-04 07:17:46 +07:00
ITK academic/ITK: Updated for version 4.13.1. 2018-09-08 08:37:51 +07:00
jalview
jellyfish_k-mer academic/jellyfish_k-mer: Added (k-mers counting tools). 2018-12-25 05:33:47 +07:00
jpicedt
jugglinglab
karma
kile
kiwisolver academic/kiwisolver: Added (Cassowary algorithm). 2018-11-03 07:45:00 +07:00
klavaro
klu academic/klu: Updated for SuiteSparse 5.4.0. 2019-01-05 07:49:29 +07:00
knime academic/knime: Fix ownership. 2017-07-15 07:27:43 +07:00
kraken academic/kraken: Added (Assigning Taxonomic Labels). 2018-12-25 05:38:56 +07:00
Kst
ktikz
kurso
labplot2
ladr academic/ladr: Switch homepage and download to https. 2018-10-06 07:25:21 +07:00
lalnview
lapack95
lapacke academic/lapacke: Updated for version 3.8.0. 2017-12-21 08:19:39 +07:00
ldl academic/ldl: Updated for SuiteSparse 5.4.0. 2019-01-05 07:49:28 +07:00
libghemical
libqalculate academic/libqalculate: Updated for version 2.8.2 2018-12-09 13:17:30 +07:00
link-grammar
loggerpro academic/loggerpro: Update homepage. 2018-07-17 07:15:39 +07:00
lpsolve
mafft academic/mafft: Updated for version 7.407. 2018-12-24 09:15:34 +07:00
magic
mathics
mathomatic
matio
maxima
megax academic/megax: Updated for version 10.0.5_1. 2018-12-24 09:21:25 +07:00
meme-suite academic/meme-suite: Added (Motif based sequence analysis tools). 2017-10-11 06:19:52 +07:00
mendeleydesktop
metis
mkDSSP
Mnemosyne academic/Mnemosyne: Fix whitespaces. 2017-10-07 07:01:53 +07:00
mpmath
mrbayes academic/mrbayes: Fixed download url. 2018-06-23 08:44:06 +07:00
muscle
ncbi-blast academic/ncbi-blast: Update script. 2018-12-24 09:24:23 +07:00
ncbi-blast+ academic/ncbi-blast+: Updated for version 2.8.1. 2019-01-24 07:48:59 +07:00
ncbi-rmblastn academic/ncbi-rmblastn: Update DEP. 2018-12-24 22:16:58 +07:00
ncview academic/ncview: Added (a netCDF visual browser). 2018-04-07 08:13:13 +07:00
ngspice academic/ngspice: Fix build. 2019-01-13 22:12:23 +07:00
novocraft academic/novocraft: Updated for version 3.09.01. 2018-12-01 07:27:49 +07:00
octave academic/octave: Updated for version 4.4.1. 2019-01-05 07:49:30 +07:00
OpenFOAM academic/OpenFOAM: Updated for version 6. 2018-07-17 07:15:42 +07:00
pal2nal academic/pal2nal: Updated for version 14.1. 2018-01-13 07:13:04 +07:00
paml academic/paml: Updated for version 4.9h. 2018-06-17 23:34:22 +01:00
pamlX academic/pamlX: Updated to build with paml-4.9h. 2018-06-17 23:41:03 +01:00
papi academic/papi: Fixed ownership. 2018-03-10 07:11:02 +07:00
pari academic/pari: Updated for version 2.11.1. 2019-01-05 07:49:21 +07:00
parmetis academic/parmetis: Update info. 2018-05-29 08:25:33 +07:00
patsy
pcb academic/pcb: Updated for version 4.0.2. 2018-01-10 23:55:51 +07:00
perlprimer academic/perlprimer: Updated for version 1.2.3_f7d3bd0. 2018-07-08 19:40:22 +01:00
PhyML academic/PhyML: Updated for version 3.3.20180621. 2018-07-08 19:25:48 +01:00
pianobooster
plasmidomics
prank-msa academic/prank-msa: Updated for version 170427. 2017-10-11 06:19:49 +07:00
primer3 academic/primer3: Updated for version 2.4.0. 2018-07-08 19:42:08 +01:00
pspp academic/pspp: Updated for version 1.2.0. 2018-11-27 08:22:03 +07:00
pulseview academic/pulseview: Updated for version 0.4.1. 2018-12-16 16:24:58 +07:00
PyAMG
pyCRAC academic/pyCRAC: Updated for version 1.3.3. 2018-12-01 07:27:48 +07:00
pyfits academic/pyfits: Update homepage. 2018-12-01 07:27:41 +07:00
pysam academic/pysam: Updated for version 0.15.2. 2019-01-18 23:39:54 +07:00
qalculate-gtk academic/qalculate-gtk: Updated for version 2.8.2 2018-12-09 13:17:30 +07:00
qcl academic/qcl: Added (A Programming Language for Quantum Computers). 2018-02-17 07:42:46 +07:00
qhull academic/qhull: Updated for version 2015.2. 2017-06-30 13:05:01 +07:00
qrupdate academic/qrupdate: Update URLs and patches. 2019-01-05 07:49:30 +07:00
QtiPlot academic/QtiPlot: Updated homepage. 2018-05-02 22:58:31 +01:00
qtoctave academic/qtoctave: Mirror download url. 2018-03-06 02:04:16 +07:00
qucs academic/qucs: Noted orphan status (no SBo maintainer). 2018-06-23 08:44:12 +07:00
R academic/R: Updated for version 3.5.1. 2018-07-21 06:53:34 +07:00
rbio academic/rbio: Updated for SuiteSparse 5.4.0. 2019-01-05 07:49:29 +07:00
reduce-algebra academic/reduce-algebra: Updated for version 20180920svn4765. 2018-09-21 21:40:29 +01:00
RepeatMasker academic/RepeatMasker: Updated for version 4.0.8. 2018-12-24 08:55:30 +07:00
root
sage academic/sage: Unmaintained. 2018-08-11 07:23:09 +07:00
sage-bin academic/sage-bin: Added (python based mathematics software). 2018-09-15 17:50:08 +01:00
samtools academic/samtools: Updated for version 1.9 + new maintainer. 2019-01-05 07:49:17 +07:00
samtools-legacy academic/samtools-legacy: Fix path. 2019-01-09 07:31:53 +07:00
scidavis academic/scidavis: Patched to fix crashes. 2018-08-02 19:40:39 +07:00
scilab academic/scilab: Updated for version 6.0.1. 2018-08-11 07:23:09 +07:00
scipy academic/scipy: Switch homepage to https. 2018-06-02 11:24:14 +01:00
scipy3
seaview academic/seaview: Updated for version 4.7. 2018-06-17 23:42:33 +01:00
sequence-analysis
Shark academic/Shark: Added (machine learning library). 2018-04-28 06:40:13 +07:00
sigrok-cli academic/sigrok-cli: Updated for version 0.7.1. 2018-12-16 16:24:13 +07:00
siril academic/siril: Fix doc ownership, use our cflags. 2017-07-12 16:39:17 +01:00
slatec
smath-studio academic/smath-studio: Changed maintainer. 2018-06-23 08:44:12 +07:00
snpEff academic/snpEff: Updated for version 4.3t. 2018-01-13 07:13:05 +07:00
solfege
spades academic/spades: Updated for version 3.13.0. 2018-12-24 10:55:58 +07:00
speedcrunch academic/speedcrunch: Fixed tarball handling. 2018-01-21 11:35:28 +00:00
spiceopus
spidey
spqr academic/spqr: Updated for version 2.0.9. 2019-01-05 07:49:30 +07:00
squizz
staden
STAR academic/STAR: Updated for version 2.6.1d. 2018-11-24 12:35:25 +07:00
stellarium academic/stellarium: Updated for version 0.18.1. 2018-08-11 07:23:05 +07:00
stringtie academic/stringtie: Added (Assembler of RNA-Seq alignments). 2018-12-24 22:16:51 +07:00
suitesparse academic/suitesparse: Updated for version 5.3.0 2018-07-07 06:54:25 +07:00
suitesparseconfig academic/suitesparseconfig: Updated for version 5.4.0. 2019-01-05 07:49:27 +07:00
sundials academic/sundials: Updated for version 3.1.1. 2018-08-02 19:22:21 +07:00
sword academic/sword: Fix for newer icu4c. 2018-04-27 01:22:08 +07:00
sword-data-kjv academic/sword-data-kjv: Updated for version 1.8.1. 2018-01-17 19:46:31 +07:00
sympy
t_coffee
tabix
tabix-legacy academic/tabix-legacy: Added (Generic indexer). 2018-12-24 22:16:45 +07:00
tilem
tilem2 academic/tilem2: Fix ownership. 2017-07-15 07:28:25 +07:00
tkgate academic/tkgate: Mirror download url. 2018-03-10 07:11:14 +07:00
topdraw
tophat academic/tophat: Force a single make job. 2017-07-29 17:50:23 +07:00
TreeGraph academic/TreeGraph: Added (A feature rich phylogenetic tree editor). 2018-06-23 08:44:00 +07:00
treeviewx academic/treeviewx: Added (Program to display phylogenetic trees). 2018-07-10 10:07:47 +01:00
trfind academic/trfind: Fix executable for use with RepeatMasker. 2018-01-17 19:46:30 +07:00
trimmomatic academic/trimmomatic: Added (Trimming Tool). 2018-12-24 22:16:59 +07:00
tuxmath academic/tuxmath: Update homepage. 2018-07-17 07:15:40 +07:00
tuxtype2 academic/tuxtype2: Update homepage. 2018-07-17 07:15:40 +07:00
ucsc-blat
ugene academic/ugene: Updated for version 1.31.1. 2018-12-24 22:17:00 +07:00
umfpack academic/umfpack: Updated for version 5.7.8. 2019-01-05 07:49:29 +07:00
units academic/units: Updated for version 2.18. 2018-11-10 07:46:57 +07:00
vcftools academic/vcftools: Updated for version 0.1.16. 2018-12-24 22:16:53 +07:00
verilog
veusz academic/veusz: Fix build against new Qt5. 2018-09-23 06:11:51 +07:00
wehi-cellsymphony
wehi-deid
wehi-hackit
wehi-weasel academic/wehi-weasel: Updated for version 3.5.0.17. 2018-12-24 22:16:53 +07:00
WEVOTE academic/WEVOTE: Added (WEighted VOting Taxonomic idEntification). 2018-12-24 08:52:55 +07:00
wmcalc academic/wmcalc: Updated for version 0.7. 2018-09-15 19:23:41 +01:00
WordNet academic/WordNet: Switch homepage to https. 2018-03-17 13:58:49 +00:00
wxmacmolplt
wxMaxima academic/wxMaxima: Switch homepage to https. 2018-10-06 07:25:18 +07:00
xcircuit
xephem
xflr5 academic/xflr5: Updated for version 6.42. 2018-06-23 02:22:22 +07:00
xfoil
xiphos academic/xiphos: Updated for version 4.1.0. 2018-04-28 06:40:13 +07:00
xoscope
Xyce academic/Xyce: Update info. 2018-05-29 08:28:21 +07:00
ZeGrapher academic/ZeGrapher: Added (math graphing). 2018-01-19 11:45:00 +00:00
zotero academic/zotero: Updated for version 5.0.60. 2019-01-24 20:02:25 +07:00