academic/bedtools: Updated for version 2.27.1.

Signed-off-by: David Spencer <idlemoor@slackbuilds.org>

academic/bedtools/README

@@ -3,7 +3,7 @@ for a wide-range of genomics analysis tasks. The most widely-used
 tools enable genome arithmetic: that is, set theory on the genome. For
 example, bedtools allows one to intersect, merge, count, complement,
 and shuffle genomic intervals from multiple files in widely-used
-genomic file formats such as BAM, BED, GFF/GTF, VCF. 
+genomic file formats such as BAM, BED, GFF/GTF, VCF.
 
 While each individual tool is designed to do a relatively simple task
 (e.g., intersect two interval files), quite sophisticated analyses can

academic/bedtools/bedtools.SlackBuild

@@ -2,7 +2,7 @@
 
 # Slackware build script for bedtools
 
-# Copyright 2014-2016 Petar Petrov slackalaxy@gmail.com
+# Copyright 2014-2018 Petar Petrov slackalaxy@gmail.com
 # All rights reserved.
 #
 # Redistribution and use of this script, with or without modification, is
@@ -24,7 +24,7 @@
 
 PRGNAM=bedtools
 DIRNAM=bedtools2
-VERSION=${VERSION:-2.26.0}
+VERSION=${VERSION:-2.27.1}
 BUILD=${BUILD:-1}
 TAG=${TAG:-_SBo}
 
@@ -73,7 +73,7 @@ find -L . \
 # Use our CFLAGS
 sed -i "/CXXFLAGS/s/=/+=/" Makefile
 
-CXXFLAGS="$SLKCFLAGS" \
+CXXFLAGS="$SLKCFLAGS -std=c++11" \
 make
 
 # Install the binary and scripts

academic/bedtools/bedtools.info

@@ -1,8 +1,8 @@
 PRGNAM="bedtools"
-VERSION="2.26.0"
+VERSION="2.27.1"
 HOMEPAGE="http://bedtools.readthedocs.org/"
-DOWNLOAD="https://github.com/arq5x/bedtools2/releases/download/v2.26.0/bedtools-2.26.0.tar.gz"
-MD5SUM="036b7b9b54aac498f14017ea5c1a5857"
+DOWNLOAD="https://github.com/arq5x/bedtools2/releases/download/v2.27.1/bedtools-2.27.1.tar.gz"
+MD5SUM="ec87cf43735e15c69f13183c6aae00a6"
 DOWNLOAD_x86_64=""
 MD5SUM_x86_64=""
 REQUIRES=""