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academic/prank-msa: Updated for version 170427.

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Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
This commit is contained in:
Petar Petrov 2017-10-07 17:34:14 +01:00 committed by Willy Sudiarto Raharjo
parent 1c218cb8d4
commit f3357334f4
3 changed files with 7 additions and 7 deletions
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6
academic/prank-msa/README
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@ -3,15 +3,15 @@ PRANK: Probabilistic Alignment Kit
PRANK is a probabilistic multiple alignment program for DNA, codon and
amino-acid sequences. It is based on a novel algorithm that treats
insertions correctly and avoids over-estimation of the number of
deletion events.
deletion events.
In addition, PRANK borrows ideas from maximum likelihood (ML) methods
used in phylogenetics and correctly takes into account the evolutionary
distances between sequences.
distances between sequences.
Lastly, PRANK allows for defining a potential structure for sequences to
be aligned and then, simultaneously with the alignment, predicts the
locations of structural units in the sequences.
locations of structural units in the sequences.
NOTE!
The dependencies listed in the REQUIRED field are not needed for

2
academic/prank-msa/prank-msa.SlackBuild
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@ -24,7 +24,7 @@
PRGNAM=prank-msa
SRCNAM=prank.source
VERSION=${VERSION:-150803}
VERSION=${VERSION:-170427}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}

6
academic/prank-msa/prank-msa.info
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@ -1,10 +1,10 @@
PRGNAM="prank-msa"
VERSION="150803"
VERSION="170427"
HOMEPAGE="http://wasabiapp.org/software/prank/"
DOWNLOAD="UNSUPPORTED"
MD5SUM=""
DOWNLOAD_x86_64="http://wasabiapp.org/download/prank/prank.source.150803.tgz"
MD5SUM_x86_64="71ac2659e91c385c96473712c0a23e8a"
DOWNLOAD_x86_64="http://wasabiapp.org/download/prank/prank.source.170427.tgz"
MD5SUM_x86_64="a5cda14dc4e5efe1f14b84eb7a7caabd"
REQUIRES="bppsuite mafft exonerate"
MAINTAINER="Petar Petrov"
EMAIL="slackalaxy@gmail.com"