Benjamin Trigona-Harany e90cf1f246 academic/cld2: Updated for version 20141106. ... Signed-off-by: Benjamin Trigona-Harany <bosth@alumni.sfu.ca>		2014-11-08 06:39:15 +07:00
..
abntex
aline
amd	academic/amd: Renamed and moved from libraries	2014-01-31 00:53:23 -06:00
amplicon
amplifx	academic/amplifx: Added (Manage, test and design your primers).	2014-01-29 23:21:17 -06:00
antiprism
archeopteryx	academic/archeopteryx: Added (phylogenetic trees analyzer).	2014-10-03 10:16:50 +07:00
aris
arka
arpack
arpack-ng	academic/arpack-ng: Added (library for solving eigenvalue problems)	2014-01-31 00:54:24 -06:00
artha
avogadro	academic/avogadro: Remove %README%.	2014-05-29 06:31:15 +07:00
bedtools	academic/bedtools: Added (genome arithmetic).	2014-10-03 10:16:51 +07:00
bibletime
bibus	academic/bibus: Updated for version 1.5.2 + new maintainer.	2014-05-04 10:52:53 +07:00
bowtie	academic/bowtie: Fix DOWNLOAD link.	2014-10-03 10:16:48 +07:00
bowtie2	academic/bowtie2: Added (A tool for aligning sequencing reads).	2013-12-14 10:53:05 -06:00
btf	academic/btf: Renamed and moved from libraries.	2014-01-31 00:53:58 -06:00
bwa	academic/bwa: Updated for version 0.7.10.	2014-07-20 18:34:04 +07:00
calc	academic/calc: Updated for version 2.12.4.14.	2014-10-12 08:33:44 +07:00
calcoo
camd	academic/camd: Renamed and moved from libraries.	2014-01-31 00:53:28 -06:00
cap3
cblas
ccolamd	academic/ccolamd: Renamed and moved from libraries.	2014-01-31 00:53:38 -06:00
celestia
chemtool
cholmod	academic/cholmod: Remove %README%.	2014-05-29 06:31:15 +07:00
cistrome-CEAS	academic/cistrome-CEAS: Added (Cis-regulatory Element Annotation).	2013-12-14 10:53:07 -06:00
cistrome-MACS	academic/cistrome-MACS: Added (Model-based Analysis of ChIP-Seq).	2013-12-14 10:53:07 -06:00
cld2	academic/cld2: Updated for version 20141106.	2014-11-08 06:39:15 +07:00
clustalo	academic/clustalo: Updated for version 1.2.1.	2014-03-03 01:31:21 +07:00
clustalw
clustalx
colamd	academic/colamd: Renamed and moved from libraries.	2014-01-31 00:53:33 -06:00
convertall
copasi	academic/copasi: Updated for version 4.14.89.	2014-10-16 09:07:24 +07:00
coq
csparse	academic/csparse: Renamed and moved from libraries.	2014-01-31 00:53:47 -06:00
cufflinks	academic/cufflinks: Updated for version 2.2.1.	2014-05-26 08:23:45 +07:00
cxsparse	academic/cxsparse: Renamed and moved from libraries.	2014-01-31 00:53:43 -06:00
drawtiming	academic/drawtiming: Added (tool for drawing timing diagrams).	2014-06-22 11:18:20 +07:00
EMBASSY	academic/EMBASSY: Use self-hosted.	2014-07-20 19:02:33 +07:00
EMBOSS	academic/EMBOSS: Use self-hosted.	2014-07-20 19:03:16 +07:00
engauge	academic/engauge: Added (Graphs to Numbers Digitizer).	2014-06-12 06:51:38 +07:00
ent
ess
evopedia_qt	academic/evopedia_qt: Added (Offline Wikipedia viewer).	2014-04-07 14:43:45 +07:00
extrema	academic/extrema: New maintainer.	2014-06-21 01:22:49 +07:00
fann
fet	academic/fet: Updated for version 5.23.3.	2014-10-04 23:20:09 +07:00
flann
flashqard
free42	academic/free42: Fix MD5SUM.	2014-08-17 18:23:48 +07:00
freechartgeany	academic/freechartgeany: Updated for version 1.1.5.	2014-01-29 23:21:06 -06:00
g3data
galculator	academic/galculator: Updated for version 2.1.3 + new maintainer.	2014-07-05 08:10:50 +07:00
gaw3	academic/gaw3: Added (A Free Gtk Analog Wave viewer).	2014-05-28 23:45:50 +07:00
Gblocks
gcalctool
gchemutils	academic/gchemutils: Updated for version 0.14.9.	2014-10-03 10:16:51 +07:00
gcompris	academic/gcompris: Updated for version 14.07.	2014-08-09 07:44:58 +07:00
geda-gaf
gelemental
geneconv	academic/geneconv: Use cp instead of cp -a.	2014-07-20 18:36:51 +07:00
genius
genometools	academic/genometools: Updated for version 1.5.3.	2014-07-20 18:38:44 +07:00
genpak
GeoGebra	academic/GeoGebra: Updated for version 4.4.45.0.	2014-09-26 18:14:54 +07:00
geomview
gerbv
ggobi
ghemical
glpk	academic/glpk: Updated for version 4.54 + new maintainer.	2014-04-07 14:43:49 +07:00
gnucap	academic/gnucap: Added (A modern analog and mixed signal circuit simulator)	2014-06-11 08:17:59 -05:00
gp2fasta
gpredict
grace
gresistor
gretl	academic/gretl: Updated for version 1.9.92.	2014-10-04 23:51:21 +07:00
grpn
gspiceui	academic/gspiceui: Added (A GUI for Ng-Spice and GNUcap).	2014-06-12 06:51:48 +07:00
gtkwave
gtypist	academic/gtypist: Update desktop file.	2014-11-02 08:27:44 +07:00
gwyddion	academic/gwyddion: Fix crash on save.	2014-10-03 10:16:54 +07:00
ij-plugins-LOCI	academic/ij-plugins-LOCI: Updated for version 5.0.5.	2014-10-03 10:16:51 +07:00
ij-plugins-UCSD
ImageJ	academic/ImageJ: Updated for version 1.48.	2014-05-26 08:20:39 +07:00
io_lib	academic/io_lib: Updated for version 1.13.7, moved to academic.	2014-07-20 18:51:10 +07:00
isoelectric-point
iTest	academic/iTest: Added (computer-based tests software).	2014-05-04 22:27:22 +07:00
itex2mml	academic/itex2mml: Fix MD5SUM.	2014-08-17 18:24:42 +07:00
jalview	academic/jalview: Updated for version 2.8.1.	2014-07-20 18:54:47 +07:00
jpicedt
jugglinglab	academic/jugglinglab: Updated for version 0.6.2.	2014-08-19 16:39:24 +07:00
kile
klu	academic/klu: Remove %README%.	2014-05-29 06:31:15 +07:00
knime	academic/knime: Fix checksum.	2014-06-18 16:19:00 -05:00
ktikz	academic/ktikz: Update HOMEPAGE and DOWNLOAD.	2014-08-19 16:39:19 +07:00
ladr
lalnview
lapack95
ldl	academic/ldl: Remove %README%.	2014-05-29 06:31:16 +07:00
libghemical
link-grammar
lpsolve	academic/lpsolve: Added (linear pogramming solver).	2014-10-11 00:14:13 +07:00
mafft	academic/mafft: Updated for version 7.182.	2014-10-03 10:16:49 +07:00
mathomatic
maxima	academic/maxima: Updated for version 5.34.1.	2014-10-12 08:39:29 +07:00
mendeleydesktop	academic/mendeleydesktop: Updated for version 1.12.1.	2014-09-21 08:34:46 +07:00
metis	academic/metis: Build static library.	2014-10-23 14:44:35 +07:00
mkDSSP	academic/mkDSSP: Updated for version 2.2.1.	2013-12-14 10:53:05 -06:00
Mnemosyne	academic/Mnemosyne: Added (A free flash-card tool).	2014-06-18 16:18:59 -05:00
mrbayes	academic/mrbayes: Updated for version 3.2.2.	2013-12-14 10:53:05 -06:00
muscle
ncbi-blast
ncbi-blast-plus	academic/ncbi-blast-plus: Updated for version 2.2.29.	2014-01-29 23:21:16 -06:00
ngspice	academic/ngspice: Updated for version 26 + new maintainer.	2014-07-28 11:10:32 +07:00
octave	academic/octave: Updated for version 3.8.1.	2014-04-12 13:59:47 -05:00
omlibraries	academic/omlibraries: Updated for version svn20141024.	2014-10-30 20:27:26 +07:00
opengrads
openmodelica	academic/openmodelica: Added (Modeling and Simulation Environment).	2014-10-24 01:06:02 +07:00
paml	academic/paml: Updated for version 4.8a.	2014-10-03 10:16:50 +07:00
pamlX	academic/pamlX: Updated documentation path.	2014-10-03 10:16:52 +07:00
pcb
perlprimer	academic/perlprimer: Fixed syntax error.	2014-02-18 14:59:56 -06:00
PhyML	academic/PhyML: Updated for version 20131112.	2013-12-14 10:53:05 -06:00
pianobooster	academic/pianobooster: Update .info.	2014-10-30 21:06:44 +07:00
plasmidomics
primer3	academic/primer3: Updated for version 2.3.6.	2013-12-14 10:53:06 -06:00
pspp	academic/pspp: Fixed deps.	2014-06-18 16:19:02 -05:00
pyfits
qhull	academic/qhull: New Maintainer.	2014-04-07 14:43:50 +07:00
qrupdate
QtiPlot	academic/QtiPlot: Update HOMEPAGE and DOWNLOAD url.	2014-04-23 07:52:07 +07:00
qtoctave
qucs
R	academic/R: Updated for version 3.1.2.	2014-11-02 12:12:27 +07:00
rbio	academic/rbio: Renamed and moved from libraries.	2014-01-31 00:53:52 -06:00
root	academic/root: Remove %README%.	2014-05-29 06:31:16 +07:00
sage	academic/sage: Updated for version 6.3.	2014-08-12 00:47:48 +07:00
samtools	academic/samtools: Added (Sequence Alignment/Map Tools).	2013-12-14 10:53:05 -06:00
scilab	academic/scilab: Updated for version 5.5.0.	2014-04-15 07:26:51 +07:00
scipy	academic/scipy: Updated for version 0.14.0.	2014-10-30 20:27:29 +07:00
seaview	academic/seaview: Updated for version 4.5.2.	2014-07-20 18:56:45 +07:00
sequence-analysis
slatec
smath-studio	academic/smath-studio: Updated for version 0.97.5154.	2014-03-06 09:00:31 +07:00
solfege
spatialite-tools	academic/spatialite-tools: Update DOWNLOAD url.	2014-09-20 08:07:45 +07:00
speedcrunch	academic/speedcrunch: Updated for version 0.11.	2014-07-07 00:00:37 -05:00
spiceopus	academic/spiceopus: Added (circuit simulator).	2014-06-25 00:09:05 +07:00
spidey
spqr	academic/spqr: Renamed and moved from libraries.	2014-01-31 00:54:22 -06:00
squizz	academic/squizz: Fix MD5SUM.	2014-08-17 18:25:43 +07:00
staden	academic/staden: Updated for version 2.0.0b10.	2014-01-29 23:21:16 -06:00
stellarium
suitesparse	academic/suiteparse: Updated README.	2014-02-08 11:10:07 -06:00
suitesparseconfig	academic/suitesparseconfig: Renamed and moved from libraries.	2014-01-31 00:53:18 -06:00
sundials	academic/sundials: Update DOWNLOAD url.	2014-10-22 08:45:37 +07:00
sword
sympy	academic/sympy: Updated for version 0.7.5.	2014-10-30 20:27:28 +07:00
t_coffee	academic/t_coffee: Updated for version 11.00.8cbe486.	2014-10-03 10:16:52 +07:00
tabix	academic/tabix: Added (Generic indexer).	2013-12-14 10:53:06 -06:00
TauDEM
tilem
tilem2
tkgate	academic/tkgate: Added (An event driven digital circuit simulator).	2014-06-21 19:28:03 +07:00
topdraw	academic/topdraw: Added (A sketchpad for protein topology diagrams).	2013-12-14 10:53:06 -06:00
tophat	academic/tophat: Updated for version 2.0.12.	2014-07-20 18:57:52 +07:00
treeview
tuxmath
tuxtype2
ucsc-blat
ugene	academic/ugene: Updated for version 1.14.1.	2014-10-03 10:16:55 +07:00
umfpack	academic/umfpack: Renamed and moved from libraries.	2014-01-31 00:54:12 -06:00
units
vcftools	academic/vcftools: Updated for version 0.1.12a.	2014-04-09 17:19:20 +07:00
verilog
WordNet
wxmacmolplt
wxMaxima
xcircuit
xephem
xoscope
zotero	academic/zotero: Updated for version 4.0.22.	2014-10-03 10:16:55 +07:00