.. |
abella
|
academic/abella: Fix README.
|
2020-10-17 09:36:38 +07:00 |
abntex
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aenig4
|
academic/aenig4: Fix README.
|
2020-10-17 09:36:38 +07:00 |
aline
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aliview
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amd
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academic/amd: BUILD bump for SuiteSparse 5.8.1.
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2021-01-17 08:45:04 +07:00 |
amplicon
|
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amplifx
|
academic/amplifx: Change URLs.
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2020-09-15 08:28:29 +07:00 |
antiprism
|
academic/antiprism: Added -fpermissive to the CXXFLAGS.
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2021-04-17 23:08:20 -05:00 |
archaeopteryx
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aris
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academic/aris: Updated for version 2. New maintainer.
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2021-02-14 06:27:53 +07:00 |
arka
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armadillo
|
academic/armadillo: Fix README.
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2020-10-17 09:36:39 +07:00 |
arpack
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arpack-ng
|
academic/arpack-ng: Updated for version 3.8.0.
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2021-01-17 08:45:03 +07:00 |
artha
|
academic/artha: Updated for version 1.0.5.
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2021-04-17 23:09:19 -05:00 |
avl
|
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avogadro
|
academic/avogadro: Fix README.
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2020-10-17 09:36:40 +07:00 |
bcftools
|
academic/bcftools: Updated for version 1.12.
|
2021-03-27 10:23:16 +07:00 |
bedGraphToBigWig
|
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bedtools
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academic/bedtools: Updated for version 2.29.2.
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2020-09-15 08:30:05 +07:00 |
biblesync
|
academic/biblesync: Update README.
|
2020-06-28 08:16:52 +07:00 |
bibletime
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academic/bibletime: Fixed dep info
|
2021-04-18 14:45:44 -05:00 |
bibus
|
academic/bibus: Fix README.
|
2020-10-17 09:36:40 +07:00 |
biopython
|
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boinc
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academic/boinc: Updated for version 7.16.16
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2021-04-10 17:04:57 +07:00 |
bowtie
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bowtie2
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academic/bowtie2: Updated for version 2.4.2.
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2020-10-10 10:18:46 +07:00 |
bowtie2-legacy
|
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bpp-core
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bpp-phyl
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bpp-phyl-omics
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bpp-popgen
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bpp-seq
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bpp-seq-omics
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bpp1.9-numcalc
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academic/bpp1.9-numcalc: Added (Bio++ 1.9 NumCalc Library)
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2020-10-10 10:18:47 +07:00 |
bpp1.9-phyl
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academic/bpp1.9-phyl: Fix slack-desc.
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2020-10-17 09:37:28 +07:00 |
bpp1.9-seq
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academic/bpp1.9-seq: Added (Bio++ 1.9 Seq Library)
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2020-10-10 10:18:47 +07:00 |
bpp1.9-utils
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academic/bpp1.9-utils: Added (Bio++ 1.9 Utils Library)
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2020-10-10 10:18:47 +07:00 |
bppsuite
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btf
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academic/btf: BUILD bump for SuiteSparse 5.8.1.
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2021-01-17 08:45:05 +07:00 |
bwa
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cadabra2
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academic/cadabra2: Fixed dep info
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2021-04-18 14:45:44 -05:00 |
CAFS_divergence
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academic/CAFS_divergence: Fix README.
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2020-10-17 09:36:33 +07:00 |
calc
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sbo/scripts: Email changes
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2020-01-18 12:25:16 +07:00 |
calcoo
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academic/calcoo: Fix README.
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2020-10-17 09:36:41 +07:00 |
camd
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academic/camd: BUILD bump for SuiteSparse 5.8.1.
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2021-01-17 08:45:04 +07:00 |
cap3
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academic/cap3: Fix README.
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2020-10-17 09:36:41 +07:00 |
CAPS_coevolution
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cblas
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academic/cblas: Updated for version 3.9.1.
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2021-04-17 11:47:42 +07:00 |
ccolamd
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academic/ccolamd: BUILD bump for SuiteSparse 5.8.1.
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2021-01-17 08:45:04 +07:00 |
cdo
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academic/cdo: Updated for version 1.9.10.
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2021-02-14 06:28:01 +07:00 |
celestia
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chartgeany
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academic/chartgeany: Added (market analysis tool)
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2020-05-10 08:37:02 +07:00 |
chemtool
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cholmod
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academic/cholmod: Updated for version 3.0.14.
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2021-01-17 08:45:06 +07:00 |
cistrome-CEAS
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academic/cistrome-CEAS: updated download link and misc cleanups
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2020-01-12 08:47:59 +07:00 |
cistrome-conductGO
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cistrome-extra
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cistrome-MACS
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academic/cistrome-MACS: updated homepage and misc cleanups
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2020-01-12 08:48:00 +07:00 |
cistrome-mdseqpos
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clark-ugene
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cld2
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academic/cld2: Fix README.
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2020-10-17 09:36:42 +07:00 |
clustalo
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clustalw
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clustalx
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colamd
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academic/colamd: BUILD bump for SuiteSparse 5.8.1.
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2021-01-17 08:45:04 +07:00 |
colin
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academic/colin: Fixed dep info
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2021-04-18 14:45:44 -05:00 |
convertall
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academic/convertall: Updated for version 0.8.0.
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2021-02-21 00:05:02 +07:00 |
copasi
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academic/copasi: Updated for version 4.28.226.
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2020-06-20 07:59:28 +07:00 |
coq
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academic/coq: Updated for version 8.9.0.
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2020-01-18 07:49:05 +07:00 |
cryptominisat
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academic/cryptominisat: Updated for version 5.7.1.
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2020-05-10 08:36:56 +07:00 |
csparse
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academic/csparse: BUILD bump for SuiteSparse 5.8.1.
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2021-01-17 08:45:05 +07:00 |
cufflinks
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cutadapt
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cvc4
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academic/cvc4: Updated for version 1.8.
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2020-09-05 08:26:44 +07:00 |
cxsparse
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academic/cxsparse: BUILD bump for SuiteSparse 5.8.1.
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2021-01-17 08:45:05 +07:00 |
dakota
|
academic/dakota: Fix README.
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2020-10-17 09:36:43 +07:00 |
Data2FCS
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datamash
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academic/datamash: Added (Basic numeric, textual & statistical ops)
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2020-12-12 07:09:22 +07:00 |
DendroPy
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diamond
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academic/diamond: Updated for version 0.9.36.
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2020-09-15 08:30:45 +07:00 |
drawtiming
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ds9
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academic/ds9: Updated for version 8.2.1.
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2021-04-02 10:31:08 +07:00 |
easy_spice
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ed-v6
|
academic/ed-v6: Fix README.
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2020-10-17 09:36:43 +07:00 |
edsim51di
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EMBASSY
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EMBOSS
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engauge
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academic/engauge: Fix README.
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2020-10-17 09:36:44 +07:00 |
ent
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eprover
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academic/eprover: Updated for version 2.5.
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2020-09-05 08:26:44 +07:00 |
equalx
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academic/equalx: Add .desktop and patch
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2020-01-12 08:47:47 +07:00 |
ess
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academic/ess: Fix README.
|
2020-10-17 09:36:44 +07:00 |
evopedia_qt
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academic/evopedia_qt: Use proper github URL.
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2020-02-24 06:10:05 +07:00 |
exonerate
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extrema
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fann
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academic/fann: Fix README.
|
2020-10-17 09:36:44 +07:00 |
fastqc
|
academic/fastqc: Updated for version 0.11.9.
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2020-02-08 02:17:03 +07:00 |
FCSalyzer
|
academic/FCSalyzer: Updated for version 0.9.18_alpha.
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2020-01-12 08:48:01 +07:00 |
fet
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academic/fet: Updated for version 5.49.1.
|
2021-03-20 11:00:42 +07:00 |
fiji
|
academic/fiji: Updated for version 20200902_2101.
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2020-09-15 08:31:23 +07:00 |
finchtv
|
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fityk
|
academic/fityk: Fix README.
|
2020-10-17 09:36:44 +07:00 |
flann
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academic/flann: Fix README.
|
2020-10-17 09:36:45 +07:00 |
flashqard
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flexbar
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free42
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academic/free42: Fix README.
|
2020-10-17 09:36:45 +07:00 |
FreeFem
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academic/FreeFem: Fix README.
|
2020-10-17 09:36:33 +07:00 |
g3data
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galculator
|
academic/galculator: Fix build on current.
|
2021-01-24 00:00:48 +07:00 |
gaw3
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Gblocks
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gchemutils
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gcompris
|
academic/gcompris: Fix README.
|
2020-10-17 09:36:45 +07:00 |
gcompris-qt
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academic/gcompris-qt: Updated for version 1.1.
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2021-03-27 09:15:33 +07:00 |
geda-gaf
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academic/geda-gaf: Added the new dependency guile1.8.
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2021-04-17 23:24:31 -05:00 |
gelemental
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academic/gelemental: Patch for the newer gcc.
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2021-04-17 23:24:32 -05:00 |
geneconv
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genius
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academic/genius: Added the new dependency vte2.
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2021-04-17 23:24:32 -05:00 |
genometools
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academic/genometools: Disabled some warnings-as-errors.
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2021-04-17 23:24:32 -05:00 |
genpak
|
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GeoGebra
|
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geomview
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academic/geomview: New maintainer.
|
2020-02-15 09:51:07 +07:00 |
gerbv
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academic/gerbv: Fix README.
|
2020-10-17 09:36:46 +07:00 |
getdp
|
academic/getdp: Fix README, slack-desc.
|
2020-10-17 09:36:49 +07:00 |
ggobi
|
academic/ggobi: Fix README.
|
2020-10-17 09:37:32 +07:00 |
ghemical
|
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glpk
|
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gmsh
|
academic/gmsh: Fix README, slack-desc.
|
2020-10-17 09:36:49 +07:00 |
gnucap
|
academic/gnucap: Fix README.
|
2020-10-17 09:37:32 +07:00 |
gp2fasta
|
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gpredict
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grace
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academic/grace: Fix README.
|
2020-10-17 09:37:32 +07:00 |
gresistor
|
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gretl
|
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gri
|
academic/gri: Update HOMEPAGE.
|
2020-04-10 00:21:09 +07:00 |
Gridcoin-Research
|
academic/Gridcoin-Research: Patched for boost >= 1.73.0.
|
2021-04-17 22:53:30 -05:00 |
grpn
|
academic/grpn: Fix README.
|
2020-10-17 09:37:33 +07:00 |
gspiceui
|
|
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gtkwave
|
academic/gtkwave: Fix README.
|
2020-10-17 09:37:33 +07:00 |
gtypist
|
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gwyddion
|
academic/gwyddion: Updated for version 2.58.
|
2021-02-14 06:28:01 +07:00 |
h5utils
|
academic/h5utils: Fixed the md5sum.
|
2020-04-04 09:50:02 +07:00 |
harminv
|
|
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HMMER
|
academic/HMMER: Updated for version 3.3.1.
|
2020-09-15 08:26:08 +07:00 |
hyphy
|
|
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IGV
|
academic/IGV: Added (Integrative Genomics Viewer)
|
2020-11-22 01:14:24 +07:00 |
io_lib
|
academic/io_lib: Updated for version 1.14.13.
|
2020-09-15 08:34:19 +07:00 |
irsim
|
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isoelectric-point
|
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iTest
|
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itex2mml
|
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ITK
|
academic/ITK: Downgrade and add GCC 10 support.
|
2021-04-18 02:00:20 -05:00 |
jalview
|
academic/jalview: Updated for version 2.11.1.0.
|
2020-09-15 08:35:34 +07:00 |
jellyfish_k-mer
|
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jpicedt
|
academic/jpicedt: Fix README.
|
2020-10-17 09:37:33 +07:00 |
jugglinglab
|
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karma
|
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kiwisolver
|
academic/kiwisolver: Fix README.
|
2020-10-17 09:37:33 +07:00 |
klavaro
|
|
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klu
|
academic/klu: BUILD bump for SuiteSparse 5.8.1.
|
2021-01-17 08:45:06 +07:00 |
knime
|
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kraken
|
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Kst
|
academic/Kst: Fix README.
|
2020-10-17 09:36:34 +07:00 |
ktikz
|
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kurso
|
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labplot2
|
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ladr
|
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lalnview
|
academic/lalnview: Update script.
|
2020-09-19 01:01:15 +07:00 |
lapack95
|
academic/lapack95: Convert script to utf-8.
|
2020-10-17 09:36:35 +07:00 |
lapacke
|
academic/lapacke: Updated for version 3.9.1.
|
2021-04-17 11:47:43 +07:00 |
latex2html
|
academic/latex2html: Updated for version 2020.
|
2020-05-16 08:44:12 +07:00 |
ldl
|
academic/ldl: BUILD bump for SuiteSparse 5.8.1.
|
2021-01-17 08:45:05 +07:00 |
libghemical
|
|
|
link-grammar
|
academic/link-grammar: Fix README.
|
2020-10-17 09:37:35 +07:00 |
locarna
|
|
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loggerpro
|
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lpsolve
|
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mafft
|
academic/mafft: Updated for version 7.471.
|
2020-09-15 08:37:09 +07:00 |
magic
|
|
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mathics
|
|
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mathomatic
|
academic/mathomatic: Fix README.
|
2020-10-17 09:37:35 +07:00 |
matio
|
|
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maxima
|
academic/maxima: Updated for version 5.44.0.
|
2021-03-20 11:00:46 +07:00 |
meep
|
academic/meep: Updated for version 1.17.1.
|
2021-01-30 09:19:18 +07:00 |
megax
|
academic/megax: Updated for version 10.1.8_1.
|
2020-09-15 08:37:49 +07:00 |
meme-db-gomo
|
academic/meme-db-gomo: Added (MEME Suite GOMo databases)
|
2020-01-12 08:48:00 +07:00 |
meme-db-motif
|
academic/meme-db-motif: Added (MEME Suite motif databases)
|
2020-01-12 08:48:00 +07:00 |
meme-db-tgene
|
academic/meme-db-tgene: Added (MEME Suite T-gene databases)
|
2020-01-12 08:48:00 +07:00 |
meme-suite
|
academic/meme-suite: Updated for version 5.1.1.
|
2020-09-15 08:39:20 +07:00 |
mendeleydesktop
|
|
|
MetaPhlAn2
|
academic/MetaPhlAn2: Fix README.
|
2020-10-17 09:36:34 +07:00 |
metis
|
|
|
mkDSSP
|
|
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Mnemosyne
|
academic/Mnemosyne: Fix README.
|
2020-10-17 09:36:35 +07:00 |
mpb
|
academic/mpb: Updated for version 1.11.1.
|
2021-01-30 09:23:19 +07:00 |
mrbayes
|
|
|
muscle
|
academic/muscle: Update script and added manual page.
|
2020-05-22 23:39:23 +07:00 |
ncbi-blast
|
|
|
ncbi-blast+
|
academic/ncbi-blast+: Updated for version 2.10.1.
|
2020-09-15 08:39:58 +07:00 |
ncbi-rmblastn
|
|
|
nco
|
academic/nco: Updated for version 4.9.7.
|
2021-02-14 06:28:00 +07:00 |
ncview
|
|
|
ngspice
|
academic/ngspice: KiCAD build fixes.
|
2021-03-13 09:02:37 +07:00 |
novocraft
|
|
|
octave
|
academic/octave: Updated for version 6.2.0.
|
2021-04-17 11:47:43 +07:00 |
OpenFOAM
|
academic/OpenFOAM: Fix README.
|
2020-10-17 09:36:34 +07:00 |
pal2nal
|
|
|
paml
|
academic/paml: Updated for version 4.9j.
|
2020-09-15 08:40:44 +07:00 |
pamlX
|
academic/pamlX: Update substitution.
|
2020-09-15 08:41:31 +07:00 |
papi
|
|
|
pari
|
academic/pari: Updated for version 2.13.1.
|
2021-04-17 11:47:40 +07:00 |
parmetis
|
academic/parmetis: Fix README.
|
2020-10-17 09:37:36 +07:00 |
patsy
|
|
|
pcalc
|
academic/pcalc: Remove empty doinst.sh.
|
2020-01-12 08:47:44 +07:00 |
pcb
|
|
|
perlprimer
|
|
|
PhyML
|
academic/PhyMLR: Updated for version 3.3.20200621.
|
2020-09-15 08:26:50 +07:00 |
pianobooster
|
academic/pianobooster: Fix README.
|
2020-10-17 09:37:36 +07:00 |
plasmidomics
|
|
|
prank-msa
|
|
|
primer3
|
academic/primer3: Respect our CFLAGS, added -fpermissive.
|
2021-04-17 23:54:36 -05:00 |
pspp
|
|
|
pulseview
|
academic/pulseview: Updated for version 20210103_d023660.
|
2021-04-17 23:54:36 -05:00 |
PyAMG
|
academic/PyAMG: Fix README.
|
2020-10-17 09:36:37 +07:00 |
pyCRAC
|
academic/pyCRAC: Updated for version 1.5.0.
|
2021-02-27 08:24:29 +07:00 |
pyfits
|
|
|
pysam
|
academic/pysam: Updated for version 0.16.0.1.
|
2020-10-10 10:18:46 +07:00 |
qalculate-gtk
|
academic/qalculate-gtk: Fixed dep information
|
2021-04-18 14:31:54 -05:00 |
qcl
|
|
|
qhull
|
|
|
qrupdate
|
academic/qrupdate: Workaround to build with gcc >= 10.x.
|
2021-04-17 23:56:17 -05:00 |
QtiPlot
|
|
|
qucs
|
|
|
R
|
academic/R: Updated for version 4.0.0.
|
2020-06-03 15:09:15 +07:00 |
RAxML
|
|
|
rbio
|
academic/rbio: BUILD bump for SuiteSparse 5.8.1.
|
2021-01-17 08:45:05 +07:00 |
reduce-algebra
|
academic/reduce-algebra: Updated for version 20201007svn5424.
|
2020-10-10 10:18:44 +07:00 |
RepeatMasker
|
academic/RepeatMasker: Updated for version 4.1.1.
|
2020-09-15 08:27:40 +07:00 |
root
|
academic/root: Updated for version 6.10.02.
|
2021-04-17 23:57:12 -05:00 |
rpy2
|
academic/rpy2: Updated for version 3.4.3.
|
2021-04-02 09:17:41 +07:00 |
sage
|
academic/sage: Updated for version 9.2.
|
2021-04-17 23:57:58 -05:00 |
sage-bin
|
|
|
samtools
|
academic/samtools: Updated for version 1.12.
|
2021-03-27 10:23:15 +07:00 |
samtools-legacy
|
|
|
scidavis
|
|
|
scilab
|
academic/scilab: Fix md5sum.
|
2020-06-28 08:16:48 +07:00 |
scipy
|
academic/scipy: Fix README.
|
2020-10-17 09:37:36 +07:00 |
scipy3
|
academic/scipy3: Updated for version 1.5.4.
|
2021-04-17 23:58:00 -05:00 |
seaview
|
academic/seaview: Updated for version 5.0.4.
|
2020-09-15 08:42:25 +07:00 |
seqkit
|
academic/seqkit: Updated for version 0.13.2.
|
2020-09-15 08:43:09 +07:00 |
SeqMonk
|
academic/SeqMonk: Added (A Mapped Sequence Analysis tool)
|
2020-10-31 11:15:27 +07:00 |
sequence-analysis
|
|
|
Shark
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academic/Shark: Updated for version 4.0.1.
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2021-04-18 02:00:20 -05:00 |
sigrok-cli
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siril
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academic/siril: Fix README.
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2020-10-17 09:37:36 +07:00 |
slatec
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smath-studio
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snpEff
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solfege
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spades
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academic/spades: Updated for version 3.14.1.
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2020-09-15 08:43:44 +07:00 |
speedcrunch
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spiceopus
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spidey
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spqr
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academic/spqr: Updated for SuiteSparse 5.8.1.
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2021-01-17 08:45:06 +07:00 |
squizz
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staden
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STAR
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academic/STAR: Updated for version 2.7.8a.
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2021-03-06 11:11:55 +07:00 |
stellarium
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academic/stellarium: Updated for version 0.20.4.
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2021-01-15 19:33:43 +00:00 |
stringtie
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academic/stringtie: Remove template comment from script.
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2020-01-12 08:47:38 +07:00 |
SU2
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academic/SU2: Fix slack-desc.
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2020-01-12 08:47:29 +07:00 |
suitesparse
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academic/suitesparse: Update README
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2021-01-17 08:45:02 +07:00 |
suitesparseconfig
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academic/suitesparseconfig: Updated for version 5.8.1.
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2021-01-17 08:45:04 +07:00 |
sundials
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academic/sundials: Fixed dep info
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2021-04-18 14:45:45 -05:00 |
sword
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academic/sword: Update README.
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2020-06-28 08:16:51 +07:00 |
sword-data-kjv
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academic/sword-data-kjv: Updated for version 1.8.1_1.
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2021-04-10 17:04:36 +07:00 |
t_coffee
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academic/t_coffee: Updated for version 13.41.0_git28bdc39.
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2020-01-12 08:48:00 +07:00 |
tabix-legacy
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tiemu
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academic/tiemu: Fix README.
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2020-10-17 09:37:37 +07:00 |
tilem
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tilem2
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tkgate
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topdraw
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tophat
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academic/tophat: Patched for gcc >= 6.x.
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2021-04-18 00:02:32 -05:00 |
treebest-ensembl
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TreeGraph
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academic/TreeGraph: Updated for version 2.15.0_887_beta.
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2020-01-12 08:48:01 +07:00 |
treerecs
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academic/treerecs: Fix README, install doinst.
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2020-10-17 09:36:51 +07:00 |
treeviewx
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trfind
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academic/trfind: Updated for version 4.09.1.
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2020-09-16 07:33:44 +07:00 |
trimmomatic
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academic/trimmomatic: Updated for version 0.39.
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2020-09-16 07:34:27 +07:00 |
tuxmath
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academic/tuxmath: Fix README.
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2020-10-17 09:37:38 +07:00 |
tuxtype2
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ucsc-blat
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ugene
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academic/ugene: Patch to avoid hardcoding headers location.
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2021-04-18 00:03:07 -05:00 |
umfpack
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academic/umfpack: Updated for SuiteSparse 5.8.1.
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2021-01-17 08:45:06 +07:00 |
units
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academic/units: Updated for version 2.20.
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2020-10-03 08:39:32 +07:00 |
vCAPS_coevolution
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academic/vCAPS_coevolution: Added (Coevolution Analysis)
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2020-10-10 10:18:48 +07:00 |
vcftools
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verilator
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academic/verilator: Added (Verilog HDL Simulator).
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2020-03-20 19:30:05 +07:00 |
verilog
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academic/verilog: Fix README.
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2020-10-17 09:37:38 +07:00 |
veusz
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academic/veusz: Use sip as provided by current.
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2021-04-18 00:04:04 -05:00 |
ViennaRNA
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academic/ViennaRNA: Update DOWNLOAD.
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2020-12-18 12:41:29 +07:00 |
wehi-cellsymphony
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wehi-deid
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wehi-hackit
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wehi-weasel
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academic/wehi-weasel: Updated for version 3.7.1.18.
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2020-09-15 08:24:56 +07:00 |
WEVOTE
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wmcalc
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academic/wmcalc: Fix README.
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2020-10-17 09:37:38 +07:00 |
WordNet
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academic/WordNet: Fix README.
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2020-10-17 09:36:37 +07:00 |
wxmacmolplt
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wxMaxima
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academic/wxMaxima: Fixed dep info
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2021-04-18 14:45:45 -05:00 |
xcircuit
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academic/xcircuit: Assume maintainership
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2020-01-18 12:25:03 +07:00 |
xephem
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academic/xephem: Fix README.
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2020-10-17 09:37:38 +07:00 |
xflr5
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academic/xflr5: Updated for version 6.47.
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2020-01-26 07:11:20 +07:00 |
xfoil
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academic/xfoil: Fix README.
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2020-10-17 09:37:39 +07:00 |
xiphos
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academic/xiphos: Fixed dep info
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2021-04-18 14:45:45 -05:00 |
xoscope
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Xyce
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academic/Xyce: Fix README.
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2020-10-17 09:36:37 +07:00 |
z3
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academic/z3: Updated for version 4.8.7.
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2020-01-12 12:36:18 +07:00 |
ZeGrapher
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zotero
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academic/zotero: Updated for version 5.0.85.
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2020-04-01 18:56:51 +07:00 |