Duncan Roe 2c92859540 academic/sage-bin: Added (python based mathematics software). ... Signed-off-by: David Spencer <idlemoor@slackbuilds.org>		2018-09-15 17:50:08 +01:00
..
abntex
aenig4
aline
aliview	academic/aliview: Updated for version 1.23.	2018-06-17 22:44:42 +01:00
amd	academic/amd: BUILD bump for SuiteSparse 5.2.0.	2018-03-24 06:50:38 +07:00
amplicon
amplifx
antiprism
archaeopteryx
aris
arka
armadillo
arpack
arpack-ng
artha	academic/artha: Mirror download url.	2018-03-06 02:04:16 +07:00
avl
avogadro	academic/avogadro: Mirror download url.	2018-03-10 07:11:14 +07:00
bedGraphToBigWig
bedtools	academic/bedtools: Updated for version 2.27.1.	2018-01-13 07:13:04 +07:00
biblesync	academic/biblesync: Updated for version 2.0.1.	2018-05-01 22:01:17 +01:00
bibletime	academic/bibletime: Updated for version 2.11.2.	2018-06-28 22:22:10 +01:00
bibus
boinc	academic/boinc: Added (Open-source software for grid computing).	2018-08-18 08:39:47 +07:00
bowtie
bowtie2
bpp-core	academic/bpp-core: Updated for version 2.4.0.	2018-06-17 22:52:37 +01:00
bpp-phyl	academic/bpp-phyl: Updated for version 2.4.0.	2018-06-17 23:04:19 +01:00
bpp-phyl-omics	academic/bpp-phyl-omics: Updated for version 2.4.0.	2018-06-17 23:09:55 +01:00
bpp-popgen	academic/bpp-popgen: Updated for version 2.4.0.	2018-06-17 23:16:12 +01:00
bpp-seq	academic/bpp-seq: Updated for version 2.4.0.	2018-06-17 22:56:32 +01:00
bpp-seq-omics	academic/bpp-seq-omics: Updated for version 2.4.0.	2018-06-17 23:06:16 +01:00
bppsuite	academic/bppsuite: Updated for version 2.4.0.	2018-06-17 23:17:59 +01:00
btf	academic/btf: BUILD bump for SuiteSparse 5.2.0.	2018-03-24 06:50:39 +07:00
bwa	academic/bwa: Updated for version 0.7.17.	2018-01-13 07:13:04 +07:00
cadabra2	academic/cadabra2: Fix DOWNLOAD url.	2018-04-27 00:41:02 +07:00
CAFS_divergence
calc	academic/calc: Updated for version 2.12.6.5.	2018-05-19 00:45:04 +01:00
calcoo
camd	academic/camd: BUILD bump for SuiteSparse 5.2.0.	2018-03-24 06:50:39 +07:00
cap3
CAPS_coevolution
cblas	academic/cblas: Updated for version 3.8.0.	2017-12-21 08:19:39 +07:00
ccolamd	academic/ccolamd: BUILD bump for SuiteSparse 5.2.0.	2018-03-24 06:50:39 +07:00
celestia
chemtool
cholmod	academic/cholmod: Updated for version 3.0.12.	2018-03-24 06:50:39 +07:00
cistrome-CEAS
cistrome-conductGO
cistrome-extra
cistrome-MACS
cistrome-mdseqpos
cld2	academic/cld2: Fix build on current.	2018-03-17 08:51:42 +07:00
clustalo
clustalw
clustalx
colamd	academic/colamd: BUILD bump for SuiteSparse 5.2.0.	2018-03-24 06:50:39 +07:00
convertall
copasi	academic/copasi: Fix DOWNLOAD_x86_64.	2018-08-05 02:04:56 +07:00
coq
cryptominisat	academic/cryptominisat: Added (SAT solver).	2018-09-14 09:26:36 +01:00
csparse	academic/csparse: BUILD bump for SuiteSparse 5.2.0.	2018-03-24 06:50:39 +07:00
cufflinks
cutadapt
cxsparse	academic/cxsparse: BUILD bump for SuiteSparse 5.2.0.	2018-03-24 06:50:39 +07:00
dakota	academic/dakota: Updated for version 6.8.	2018-06-07 14:33:56 +01:00
Data2FCS
drawtiming
ds9	academic/ds9: Updated for version 7.6.	2018-05-12 06:58:27 +07:00
easy_spice
edsim51di
EMBASSY
EMBOSS
engauge	academic/engauge: Fixed build with openjpeg-2.3.0.	2018-02-18 10:35:26 +00:00
ent
equalx
ess	academic/ess: Updated for version 17.11.	2018-07-27 21:33:34 +07:00
evopedia_qt
exonerate
extrema
fann
fastqc	academic/fastqc: Updated for version 0.11.7.	2018-06-17 23:28:44 +01:00
FCSalyzer	academic/FCSalyzer: Updated for version 0.9.15_alpha.	2018-06-17 22:32:35 +01:00
fet	academic/fet: Updated for version 5.36.1.	2018-06-28 20:39:23 +01:00
finchtv
fityk
flann
flashqard
flexbar	academic/flexbar: Updated for version 3.4.0.	2018-07-07 06:54:16 +07:00
free42
freechartgeany
g3data
galculator	academic/galculator: Fix download url.	2018-03-06 01:27:35 +07:00
gaw3
Gblocks	academic/Gblocks: Fix download url.	2018-03-03 08:42:14 +07:00
gcalctool
gchemutils	academic/gchemutils: Updated for version 0.14.17.	2018-07-08 19:28:35 +01:00
gcompris	academic/gcompris: Updated for version 17.05.	2017-12-27 18:10:01 -06:00
geda-gaf
gelemental
geneconv
genius	academic/genius: Updated for version 1.0.23.	2018-02-17 07:42:45 +07:00
genometools	academic/genometools: Updated for version 1.5.10.	2018-07-08 19:32:20 +01:00
genpak
GeoGebra	academic/GeoGebra: Update homepage.	2018-06-02 07:32:36 +07:00
geomview
gerbv
ggobi
ghemical
glpk
gnucap
gp2fasta
gpredict
grace
gresistor
gretl
Gridcoin-Research	academic/Gridcoin-Research: Updated for version 3.7.16.0.	2018-09-08 08:37:40 +07:00
grpn
gspiceui
gtkwave
gtypist
gwyddion	academic/gwyddion: Updated for version 2.51.	2018-06-28 20:28:21 +01:00
HMMER	academic/HMMER: Updated for version 3.2.1.	2018-06-17 22:34:10 +01:00
hyphy	academic/hyphy: Updated for version 2.3.13.	2018-07-08 19:33:53 +01:00
ij-plugins-LOCI	academic/ij-plugins-LOCI: Updated for version 5.8.2.	2018-06-17 23:31:07 +01:00
ij-plugins-UCSD
ImageJ	academic/ImageJ: Updated for version 1.52.	2018-06-17 22:35:46 +01:00
io_lib
irsim
isoelectric-point
iTest
itex2mml
ITK	academic/ITK: Updated for version 4.13.1.	2018-09-08 08:37:51 +07:00
jalview
jpicedt
jugglinglab
karma
kile
klavaro
klu	academic/klu: Updated for version 1.3.9.	2018-03-24 06:50:39 +07:00
knime
Kst
ktikz
kurso
labplot2
ladr
lalnview
lapack95
lapacke	academic/lapacke: Updated for version 3.8.0.	2017-12-21 08:19:39 +07:00
ldl	academic/ldl: BUILD bump for SuiteSparse 5.2.0.	2018-03-24 06:50:39 +07:00
libghemical
libqalculate	academic/libqalculate: Updated for version 2.2.0	2018-01-17 19:46:27 +07:00
link-grammar
loggerpro	academic/loggerpro: Update homepage.	2018-07-17 07:15:39 +07:00
lpsolve
mafft	academic/mafft: Updated for version 7.402.	2018-06-17 23:32:05 +01:00
magic
mathics
mathomatic
matio
maxima
megax	academic/megax: Added (Molecular Evolutionary Genetics Analysis).	2018-07-13 23:14:52 +01:00
meme-suite
mendeleydesktop
metis
mkDSSP
Mnemosyne
mpmath
mrbayes	academic/mrbayes: Fixed download url.	2018-06-23 08:44:06 +07:00
muscle
ncbi-blast	academic/ncbi-blast: Updated downloar urls.	2018-03-02 08:15:00 +07:00
ncbi-blast-plus	academic/ncbi-blast-plus: Updated for version 2.7.1.	2018-01-13 07:13:04 +07:00
ncbi-rmblastn	academic/ncbi-rmblastn: Added (NCBI RMBlast).	2018-01-13 07:13:04 +07:00
ncview	academic/ncview: Added (a netCDF visual browser).	2018-04-07 08:13:13 +07:00
ngspice	academic/ngspice: Updated for version 28.	2018-06-08 23:08:21 +01:00
novocraft	academic/novocraft: Updated for version 3.08.02.	2018-01-27 07:43:47 +07:00
octave	academic/octave: Updated for version 4.2.2.	2018-03-24 06:50:40 +07:00
OpenFOAM	academic/OpenFOAM: Updated for version 6.	2018-07-17 07:15:42 +07:00
pal2nal	academic/pal2nal: Updated for version 14.1.	2018-01-13 07:13:04 +07:00
paml	academic/paml: Updated for version 4.9h.	2018-06-17 23:34:22 +01:00
pamlX	academic/pamlX: Updated to build with paml-4.9h.	2018-06-17 23:41:03 +01:00
papi	academic/papi: Fixed ownership.	2018-03-10 07:11:02 +07:00
pari	academic/pari: Updated for version 2.11.0.	2018-08-24 00:51:31 +01:00
parmetis	academic/parmetis: Update info.	2018-05-29 08:25:33 +07:00
patsy
pcb	academic/pcb: Updated for version 4.0.2.	2018-01-10 23:55:51 +07:00
perlprimer	academic/perlprimer: Updated for version 1.2.3_f7d3bd0.	2018-07-08 19:40:22 +01:00
PhyML	academic/PhyML: Updated for version 3.3.20180621.	2018-07-08 19:25:48 +01:00
pianobooster
plasmidomics
prank-msa
primer3	academic/primer3: Updated for version 2.4.0.	2018-07-08 19:42:08 +01:00
pspp	academic/pspp: Updated for version 1.0.1.	2018-06-17 19:13:25 +01:00
pulseview
PyAMG
pyCRAC	academic/pyCRAC: Updated for version 1.3.2.	2018-07-07 06:54:17 +07:00
pyfits	academic/pyfits: Update download url.	2018-03-02 08:16:03 +07:00
pysam	academic/pysam: Change EMAIL.	2018-07-07 06:54:17 +07:00
qalculate-gtk	academic/qalculate-gtk: Updated for version 2.2.0	2018-01-17 19:46:27 +07:00
qcl	academic/qcl: Added (A Programming Language for Quantum Computers).	2018-02-17 07:42:46 +07:00
qhull
qrupdate
QtiPlot	academic/QtiPlot: Updated homepage.	2018-05-02 22:58:31 +01:00
qtoctave	academic/qtoctave: Mirror download url.	2018-03-06 02:04:16 +07:00
qucs	academic/qucs: Noted orphan status (no SBo maintainer).	2018-06-23 08:44:12 +07:00
R	academic/R: Updated for version 3.5.1.	2018-07-21 06:53:34 +07:00
rbio	academic/rbio: BUILD bump for SuiteSparse 5.2.0.	2018-03-24 06:50:39 +07:00
reduce-algebra	academic/reduce-algebra: Updated for version 20180808svn4717.	2018-08-11 07:23:10 +07:00
RepeatMasker	academic/RepeatMasker: Added (Screen DNA sequence).	2018-01-13 07:13:05 +07:00
root
sage	academic/sage: Unmaintained.	2018-08-11 07:23:09 +07:00
sage-bin	academic/sage-bin: Added (python based mathematics software).	2018-09-15 17:50:08 +01:00
samtools
scidavis	academic/scidavis: Patched to fix crashes.	2018-08-02 19:40:39 +07:00
scilab	academic/scilab: Updated for version 6.0.1.	2018-08-11 07:23:09 +07:00
scipy	academic/scipy: Switch homepage to https.	2018-06-02 11:24:14 +01:00
scipy3
seaview	academic/seaview: Updated for version 4.7.	2018-06-17 23:42:33 +01:00
sequence-analysis
Shark	academic/Shark: Added (machine learning library).	2018-04-28 06:40:13 +07:00
sigrok-cli
siril
slatec
smath-studio	academic/smath-studio: Changed maintainer.	2018-06-23 08:44:12 +07:00
snpEff	academic/snpEff: Updated for version 4.3t.	2018-01-13 07:13:05 +07:00
solfege
spades	academic/spades: Updated for version 3.12.0.	2018-06-17 23:45:19 +01:00
speedcrunch	academic/speedcrunch: Fixed tarball handling.	2018-01-21 11:35:28 +00:00
spiceopus
spidey
spqr	academic/spqr: BUILD bump for SuiteSparse 5.2.0.	2018-03-24 06:50:40 +07:00
squizz
staden
STAR	academic/STAR: Updated for version 2.6.1a.	2018-09-01 07:32:17 +07:00
stellarium	academic/stellarium: Updated for version 0.18.1.	2018-08-11 07:23:05 +07:00
suitesparse	academic/suitesparse: Updated for version 5.3.0	2018-07-07 06:54:25 +07:00
suitesparseconfig	academic/suitesparseconfig: Updated for version 5.2.0.	2018-03-24 06:50:38 +07:00
sundials	academic/sundials: Updated for version 3.1.1.	2018-08-02 19:22:21 +07:00
sword	academic/sword: Fix for newer icu4c.	2018-04-27 01:22:08 +07:00
sword-data-kjv	academic/sword-data-kjv: Updated for version 1.8.1.	2018-01-17 19:46:31 +07:00
sympy
t_coffee
tabix
tilem
tilem2
tkgate	academic/tkgate: Mirror download url.	2018-03-10 07:11:14 +07:00
topdraw
tophat
TreeGraph	academic/TreeGraph: Added (A feature rich phylogenetic tree editor).	2018-06-23 08:44:00 +07:00
treeviewx	academic/treeviewx: Added (Program to display phylogenetic trees).	2018-07-10 10:07:47 +01:00
trfind	academic/trfind: Fix executable for use with RepeatMasker.	2018-01-17 19:46:30 +07:00
tuxmath	academic/tuxmath: Update homepage.	2018-07-17 07:15:40 +07:00
tuxtype2	academic/tuxtype2: Update homepage.	2018-07-17 07:15:40 +07:00
ucsc-blat
ugene	academic/ugene: Updated for version 1.30.0.	2018-06-18 00:09:53 +01:00
umfpack	academic/umfpack: BUILD bump for SuiteSparse 5.2.0.	2018-03-24 06:50:40 +07:00
units	academic/units: Updated for version 2.17.	2018-07-06 22:47:13 +01:00
vcftools
verilog
veusz	academic/veusz: Updated for version 3.0.1.	2018-08-11 07:23:10 +07:00
wehi-cellsymphony
wehi-deid
wehi-hackit
wehi-weasel
wmcalc	academic/wmcalc: Update homepage and download.	2018-04-28 06:40:14 +07:00
WordNet	academic/WordNet: Switch homepage to https.	2018-03-17 13:58:49 +00:00
wxmacmolplt
wxMaxima
xcircuit
xephem
xflr5	academic/xflr5: Updated for version 6.42.	2018-06-23 02:22:22 +07:00
xfoil
xiphos	academic/xiphos: Updated for version 4.1.0.	2018-04-28 06:40:13 +07:00
xoscope
Xyce	academic/Xyce: Update info.	2018-05-29 08:28:21 +07:00
ZeGrapher	academic/ZeGrapher: Added (math graphing).	2018-01-19 11:45:00 +00:00
zotero	academic/zotero: Updated for version 5.0.52.	2018-07-08 19:44:33 +01:00