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24 lines
1.5 KiB
Diff
24 lines
1.5 KiB
Diff
diff -up ugene-1.22.0/src/libs_3rdparty/samtools/samtools.pri.dont_hardcode_includes ugene-1.22.0/src/libs_3rdparty/samtools/samtools.pri
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--- ugene-1.22.0/src/libs_3rdparty/samtools/samtools.pri.dont_hardcode_includes 2016-03-31 07:21:56.000000000 -0500
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+++ ugene-1.22.0/src/libs_3rdparty/samtools/samtools.pri 2016-06-02 17:49:02.383069490 -0500
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@@ -3,7 +3,7 @@ UGENE_RELATIVE_DESTDIR = ''
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TEMPLATE = lib
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CONFIG +=thread debug_and_release staticlib warn_off
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-INCLUDEPATH += src src/samtools ../../include /usr/include
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+INCLUDEPATH += src src/samtools ../../include
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win32 : INCLUDEPATH += src/samtools/win32
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DEFINES+="_FILE_OFFSET_BITS=64" _LARGEFILE64_SOURCE _USE_KNETFILE
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win32 : DEFINES += _USE_MATH_DEFINES "inline=__inline" "__func__=__FUNCTION__" "R_OK=4" "atoll=_atoi64" "alloca=_alloca"
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diff -up ugene-1.22.0/src/plugins_3rdparty/variants/variants.pri.dont_hardcode_includes ugene-1.22.0/src/plugins_3rdparty/variants/variants.pri
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--- ugene-1.22.0/src/plugins_3rdparty/variants/variants.pri.dont_hardcode_includes 2016-03-31 07:22:09.000000000 -0500
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+++ ugene-1.22.0/src/plugins_3rdparty/variants/variants.pri 2016-06-02 20:26:35.265356432 -0500
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@@ -20,7 +20,7 @@ use_bundled_zlib() {
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win32 : LIBS += -lwsock32
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-INCLUDEPATH += src ../../include /usr/include
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+INCLUDEPATH += src ../../include
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INCLUDEPATH += ../../libs_3rdparty/samtools/src/samtools
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INCLUDEPATH += ../../libs_3rdparty/samtools/src
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INCLUDEPATH += ../../libs_3rdparty/samtools/src/samtools/bcftools
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