| .. |
|
abella
|
academic/abella: Reflow README.
|
2020-02-01 09:00:28 +07:00 |
|
abntex
|
|
|
|
aenig4
|
|
|
|
aline
|
|
|
|
aliview
|
academic/aliview: Updated for version 1.26.
|
2019-08-03 06:46:55 +07:00 |
|
amd
|
academic/amd: Updated for SuiteSparse 5.6.0.
|
2020-02-24 06:10:11 +07:00 |
|
amplicon
|
|
|
|
amplifx
|
academic/amplifx: Change URLs.
|
2020-09-15 08:28:29 +07:00 |
|
antiprism
|
academic/antiprism: Assume maintainership
|
2020-01-18 12:25:03 +07:00 |
|
archaeopteryx
|
|
|
|
aris
|
academic/aris: New maintainer.
|
2020-02-15 09:51:07 +07:00 |
|
arka
|
|
|
|
armadillo
|
|
|
|
arpack
|
|
|
|
arpack-ng
|
|
|
|
artha
|
|
|
|
avl
|
|
|
|
avogadro
|
|
|
|
bcftools
|
academic/bcftools: Remove template comment from script.
|
2020-01-12 08:47:29 +07:00 |
|
bedGraphToBigWig
|
|
|
|
bedtools
|
academic/bedtools: Updated for version 2.29.2.
|
2020-09-15 08:30:05 +07:00 |
|
biblesync
|
academic/biblesync: Update README.
|
2020-06-28 08:16:52 +07:00 |
|
bibletime
|
academic/bibletime: Updated for version 3.0.
|
2020-09-05 08:26:47 +07:00 |
|
bibus
|
|
|
|
biopython
|
academic/biopython: Added (Python tools for biological computation).
|
2019-08-03 06:41:13 +07:00 |
|
boinc
|
academic/boinc: fix default data location
|
2020-05-23 09:32:05 +07:00 |
|
bowtie
|
|
|
|
bowtie2
|
academic/bowtie2: Updated for version 2.4.1.
|
2020-03-07 07:58:59 +07:00 |
|
bowtie2-legacy
|
academic/bowtie2-legacy: Fixed PRGNAM in build script.
|
2020-01-03 02:06:16 -06:00 |
|
bpp-core
|
|
|
|
bpp-phyl
|
|
|
|
bpp-phyl-omics
|
|
|
|
bpp-popgen
|
|
|
|
bpp-seq
|
|
|
|
bpp-seq-omics
|
|
|
|
bppsuite
|
|
|
|
btf
|
academic/btf: Updated for SuiteSparse 5.6.0.
|
2020-02-24 06:10:12 +07:00 |
|
bwa
|
|
|
|
cadabra2
|
academic/cadabra2: Updated for version 2.3.0.
|
2020-06-14 17:45:42 +07:00 |
|
CAFS_divergence
|
|
|
|
calc
|
sbo/scripts: Email changes
|
2020-01-18 12:25:16 +07:00 |
|
calcoo
|
|
|
|
camd
|
academic/camd: Updated for SuiteSparse 5.6.0.
|
2020-02-24 06:10:11 +07:00 |
|
cap3
|
|
|
|
CAPS_coevolution
|
|
|
|
cblas
|
academic/cblas: Updated for version 3.9.0.
|
2020-01-12 08:48:04 +07:00 |
|
ccolamd
|
academic/ccolamd: Updated for SuiteSparse 5.6.0.
|
2020-02-24 06:10:11 +07:00 |
|
cdo
|
academic/cdo: Added (Climate Data Operators)
|
2020-06-14 17:45:46 +07:00 |
|
celestia
|
|
|
|
chartgeany
|
academic/chartgeany: Added (market analysis tool)
|
2020-05-10 08:37:02 +07:00 |
|
chemtool
|
|
|
|
cholmod
|
academic/cholmod: Updated for SuiteSparse 5.6.0.
|
2020-02-24 06:10:12 +07:00 |
|
cistrome-CEAS
|
academic/cistrome-CEAS: updated download link and misc cleanups
|
2020-01-12 08:47:59 +07:00 |
|
cistrome-conductGO
|
|
|
|
cistrome-extra
|
|
|
|
cistrome-MACS
|
academic/cistrome-MACS: updated homepage and misc cleanups
|
2020-01-12 08:48:00 +07:00 |
|
cistrome-mdseqpos
|
|
|
|
clark-ugene
|
academic/clark-ugene: Fixed PRGNAM in build script.
|
2020-01-03 02:06:16 -06:00 |
|
cld2
|
|
|
|
clustalo
|
|
|
|
clustalw
|
|
|
|
clustalx
|
|
|
|
colamd
|
academic/colamd: Updated for SuiteSparse 5.6.0.
|
2020-02-24 06:10:11 +07:00 |
|
colin
|
academic/colin: Updated for version 1.8.1.
|
2020-06-17 00:59:13 +07:00 |
|
convertall
|
|
|
|
copasi
|
academic/copasi: Updated for version 4.28.226.
|
2020-06-20 07:59:28 +07:00 |
|
coq
|
academic/coq: Updated for version 8.9.0.
|
2020-01-18 07:49:05 +07:00 |
|
cryptominisat
|
academic/cryptominisat: Updated for version 5.7.1.
|
2020-05-10 08:36:56 +07:00 |
|
csparse
|
academic/csparse: Updated for SuiteSparse 5.6.0.
|
2020-02-24 06:10:11 +07:00 |
|
cufflinks
|
|
|
|
cutadapt
|
|
|
|
cvc4
|
academic/cvc4: Updated for version 1.8.
|
2020-09-05 08:26:44 +07:00 |
|
cxsparse
|
academic/cxsparse: Updated for SuiteSparse 5.6.0.
|
2020-02-24 06:10:11 +07:00 |
|
dakota
|
academic/dakota: Updated for version 6.11.0.
|
2020-08-29 10:08:02 +07:00 |
|
Data2FCS
|
|
|
|
DendroPy
|
academic/DendroPy: Added (A Phylogenetic Computing Library).
|
2019-08-02 00:18:53 +07:00 |
|
diamond
|
academic/diamond: Updated for version 0.9.36.
|
2020-09-15 08:30:45 +07:00 |
|
drawtiming
|
|
|
|
ds9
|
academic/ds9: Updated for version 8.1.
|
2020-02-08 08:34:04 +07:00 |
|
easy_spice
|
|
|
|
ed-v6
|
sbo/scripts: Email changes
|
2020-01-18 12:25:16 +07:00 |
|
edsim51di
|
academic/edsim51di: Update DEP.
|
2019-05-30 09:57:35 +07:00 |
|
EMBASSY
|
|
|
|
EMBOSS
|
|
|
|
engauge
|
|
|
|
ent
|
|
|
|
eprover
|
academic/eprover: Updated for version 2.5.
|
2020-09-05 08:26:44 +07:00 |
|
equalx
|
academic/equalx: Add .desktop and patch
|
2020-01-12 08:47:47 +07:00 |
|
ess
|
|
|
|
evopedia_qt
|
academic/evopedia_qt: Use proper github URL.
|
2020-02-24 06:10:05 +07:00 |
|
exonerate
|
|
|
|
extrema
|
|
|
|
fann
|
|
|
|
fastqc
|
academic/fastqc: Updated for version 0.11.9.
|
2020-02-08 02:17:03 +07:00 |
|
FCSalyzer
|
academic/FCSalyzer: Updated for version 0.9.18_alpha.
|
2020-01-12 08:48:01 +07:00 |
|
fet
|
academic/fet: Updated for version 5.44.9.
|
2020-06-28 08:16:49 +07:00 |
|
fiji
|
academic/fiji: Updated for version 20200902_2101.
|
2020-09-15 08:31:23 +07:00 |
|
finchtv
|
|
|
|
fityk
|
|
|
|
flann
|
|
|
|
flashqard
|
|
|
|
flexbar
|
academic/flexbar: Updated for version 3.5.0.
|
2019-05-11 07:14:20 +07:00 |
|
free42
|
|
|
|
FreeFem
|
academic/FreeFem: Updated for version 4.5.
|
2020-02-19 17:59:36 +07:00 |
|
g3data
|
|
|
|
galculator
|
|
|
|
gaw3
|
|
|
|
Gblocks
|
|
|
|
gchemutils
|
|
|
|
gcompris
|
|
|
|
gcompris-qt
|
academic/gcompris-qt: Added (an educational software suite)
|
2020-05-10 02:24:08 +01:00 |
|
geda-gaf
|
|
|
|
gelemental
|
academic/gelemental: Updated for version 2.0.0.
|
2019-08-03 07:04:14 +07:00 |
|
geneconv
|
|
|
|
genius
|
|
|
|
genometools
|
academic/genometools: Updated for version 1.6.1.
|
2020-09-15 08:32:19 +07:00 |
|
genpak
|
|
|
|
GeoGebra
|
academic/GeoGebra: Update DEP.
|
2019-05-30 09:56:51 +07:00 |
|
geomview
|
academic/geomview: New maintainer.
|
2020-02-15 09:51:07 +07:00 |
|
gerbv
|
|
|
|
getdp
|
academic/getdp: Added (Finite Element Solver).
|
2020-02-16 05:50:51 +07:00 |
|
ggobi
|
|
|
|
ghemical
|
|
|
|
glpk
|
|
|
|
gmsh
|
academic/gmsh: Updated for version 4.5.4.
|
2020-03-14 07:19:45 +07:00 |
|
gnucap
|
academic/gnucap: Fix VERSION in script.
|
2020-01-03 04:44:15 -06:00 |
|
gp2fasta
|
|
|
|
gpredict
|
|
|
|
grace
|
academic/grace: Updated for version 5.1.25 (+ new maintainer)
|
2020-01-02 23:33:50 -06:00 |
|
gresistor
|
|
|
|
gretl
|
|
|
|
gri
|
academic/gri: Update HOMEPAGE.
|
2020-04-10 00:21:09 +07:00 |
|
Gridcoin-Research
|
academic/Gridcoin-Research: updated for version 4.0.6.0
|
2020-02-08 15:03:24 +07:00 |
|
grpn
|
|
|
|
gspiceui
|
academic/gspiceui: Updated for version 1.2.36.
|
2019-08-17 20:07:20 +07:00 |
|
gtkwave
|
|
|
|
gtypist
|
|
|
|
gwyddion
|
academic/gwyddion: Updated for version 2.56.
|
2020-09-11 23:38:08 +01:00 |
|
h5utils
|
academic/h5utils: Fixed the md5sum.
|
2020-04-04 09:50:02 +07:00 |
|
harminv
|
academic/harminv: Added (harmonic inversion from a time series).
|
2019-07-08 05:50:43 +07:00 |
|
HMMER
|
academic/HMMER: Updated for version 3.3.1.
|
2020-09-15 08:26:08 +07:00 |
|
hyphy
|
|
|
|
io_lib
|
academic/io_lib: Updated for version 1.14.13.
|
2020-09-15 08:34:19 +07:00 |
|
irsim
|
|
|
|
isoelectric-point
|
|
|
|
iTest
|
|
|
|
itex2mml
|
|
|
|
ITK
|
academic/ITK: Fix slack-desc.
|
2020-01-12 08:47:29 +07:00 |
|
jalview
|
academic/jalview: Updated for version 2.11.1.0.
|
2020-09-15 08:35:34 +07:00 |
|
jellyfish_k-mer
|
academic/jellyfish_k-mer: Fixed PRGNAM in build script.
|
2020-01-03 02:06:16 -06:00 |
|
jpicedt
|
|
|
|
jugglinglab
|
|
|
|
karma
|
|
|
|
kile
|
|
|
|
kiwisolver
|
|
|
|
klavaro
|
academic/klavaro: Updated for version 3.03.
|
2019-11-16 20:27:48 +07:00 |
|
klu
|
academic/klu: Updated for SuiteSparse 5.6.0.
|
2020-02-24 06:10:12 +07:00 |
|
knime
|
|
|
|
kraken
|
academic/kraken: Updated for version 1.1.1.
|
2019-08-03 07:04:42 +07:00 |
|
Kst
|
|
|
|
ktikz
|
|
|
|
kurso
|
|
|
|
labplot2
|
|
|
|
ladr
|
|
|
|
lalnview
|
academic/lalnview: Update script.
|
2020-09-19 01:01:15 +07:00 |
|
lapack95
|
|
|
|
lapacke
|
academic/lapacke: Updated for version 3.9.0.
|
2020-01-12 08:48:04 +07:00 |
|
latex2html
|
academic/latex2html: Updated for version 2020.
|
2020-05-16 08:44:12 +07:00 |
|
ldl
|
academic/ldl: Updated for SuiteSparse 5.6.0.
|
2020-02-24 06:10:11 +07:00 |
|
libghemical
|
|
|
|
libqalculate
|
academic/libqalculate: Updated to version 3.10.0
|
2020-05-16 08:44:19 +07:00 |
|
link-grammar
|
|
|
|
locarna
|
academic/locarna: Updated for version 1.9.2.3.
|
2019-09-08 07:30:07 +07:00 |
|
loggerpro
|
|
|
|
lpsolve
|
|
|
|
mafft
|
academic/mafft: Updated for version 7.471.
|
2020-09-15 08:37:09 +07:00 |
|
magic
|
|
|
|
mathics
|
|
|
|
mathomatic
|
|
|
|
matio
|
|
|
|
maxima
|
|
|
|
meep
|
academic/meep: Updated for version 1.14.
|
2020-05-16 08:44:09 +07:00 |
|
megax
|
academic/megax: Updated for version 10.1.8_1.
|
2020-09-15 08:37:49 +07:00 |
|
meme-db-gomo
|
academic/meme-db-gomo: Added (MEME Suite GOMo databases)
|
2020-01-12 08:48:00 +07:00 |
|
meme-db-motif
|
academic/meme-db-motif: Added (MEME Suite motif databases)
|
2020-01-12 08:48:00 +07:00 |
|
meme-db-tgene
|
academic/meme-db-tgene: Added (MEME Suite T-gene databases)
|
2020-01-12 08:48:00 +07:00 |
|
meme-suite
|
academic/meme-suite: Updated for version 5.1.1.
|
2020-09-15 08:39:20 +07:00 |
|
mendeleydesktop
|
|
|
|
MetaPhlAn2
|
academic/MetaPhlAn2: Updated for version 2.9.5.3.
|
2020-01-12 08:48:01 +07:00 |
|
metis
|
|
|
|
mkDSSP
|
|
|
|
Mnemosyne
|
|
|
|
mpb
|
academic/mpb: Updated for version 1.10.0.
|
2020-05-16 08:44:08 +07:00 |
|
mrbayes
|
academic/mrbayes: Updated for version 3.2.7a.
|
2019-08-03 07:05:50 +07:00 |
|
muscle
|
academic/muscle: Update script and added manual page.
|
2020-05-22 23:39:23 +07:00 |
|
ncbi-blast
|
|
|
|
ncbi-blast+
|
academic/ncbi-blast+: Updated for version 2.10.1.
|
2020-09-15 08:39:58 +07:00 |
|
ncbi-rmblastn
|
|
|
|
nco
|
academic/nco: Updated for version 4.9.4.
|
2020-09-19 08:43:03 +07:00 |
|
ncview
|
|
|
|
ngspice
|
academic/ngspice: Updated for version 32.
|
2020-06-01 08:46:35 +07:00 |
|
novocraft
|
academic/novocraft: Updated for version 3.09.03.
|
2019-08-03 06:20:02 +07:00 |
|
octave
|
academic/octave: Updated for version 5.2.0.
|
2020-02-24 06:10:12 +07:00 |
|
OpenFOAM
|
academic/OpenFOAM: Updated for version 8.
|
2020-08-29 10:08:03 +07:00 |
|
pal2nal
|
|
|
|
paml
|
academic/paml: Updated for version 4.9j.
|
2020-09-15 08:40:44 +07:00 |
|
pamlX
|
academic/pamlX: Update substitution.
|
2020-09-15 08:41:31 +07:00 |
|
papi
|
|
|
|
pari
|
academic/pari: Fix .info.
|
2020-01-03 04:44:14 -06:00 |
|
parmetis
|
|
|
|
patsy
|
|
|
|
pcalc
|
academic/pcalc: Remove empty doinst.sh.
|
2020-01-12 08:47:44 +07:00 |
|
pcb
|
|
|
|
perlprimer
|
academic/perlprimer: Updated for version 1.2.4.
|
2019-08-03 07:08:27 +07:00 |
|
PhyML
|
academic/PhyMLR: Updated for version 3.3.20200621.
|
2020-09-15 08:26:50 +07:00 |
|
pianobooster
|
|
|
|
plasmidomics
|
|
|
|
prank-msa
|
|
|
|
primer3
|
|
|
|
pspp
|
|
|
|
pulseview
|
|
|
|
PyAMG
|
|
|
|
pyCRAC
|
academic/pyCRAC: Updated for version 1.4.6.
|
2019-10-26 21:46:16 +07:00 |
|
pyfits
|
|
|
|
pysam
|
academic/pysam: Updated for version 0.16.0.1.
|
2020-09-04 00:46:23 +07:00 |
|
qalculate-gtk
|
academic/qalculate-gtk: Updated to version 3.10.0
|
2020-05-16 08:44:19 +07:00 |
|
qcl
|
|
|
|
qhull
|
|
|
|
qrupdate
|
|
|
|
QtiPlot
|
|
|
|
qucs
|
academic/qucs: Updated for version 0.0.19.
|
2020-01-12 11:17:50 +07:00 |
|
R
|
academic/R: Updated for version 4.0.0.
|
2020-06-03 15:09:15 +07:00 |
|
RAxML
|
academic/RAxML: Added (Randomized Axelerated Maximum Likelihood).
|
2019-08-02 00:45:41 +07:00 |
|
rbio
|
academic/rbio: Updated for SuiteSparse 5.6.0.
|
2020-02-24 06:10:12 +07:00 |
|
reduce-algebra
|
academic/reduce-algebra: Updated for version 20200624svn5377.
|
2020-06-28 08:16:51 +07:00 |
|
RepeatMasker
|
academic/RepeatMasker: Updated for version 4.1.1.
|
2020-09-15 08:27:40 +07:00 |
|
root
|
|
|
|
rpy2
|
academic/rpy2: Updated for version 3.3.5.
|
2020-09-04 00:44:53 +07:00 |
|
sage
|
academic/sage: Updated for version 9.1.
|
2020-06-04 06:14:07 +07:00 |
|
sage-bin
|
|
|
|
samtools
|
academic/samtools: Updated for version 1.10.
|
2020-01-02 23:33:50 -06:00 |
|
samtools-legacy
|
academic/samtools-legacy: Fixed PRGNAM in build script.
|
2020-01-03 02:06:16 -06:00 |
|
scidavis
|
academic/scidavis: Updated for version 1.26.
|
2019-12-19 22:47:21 +07:00 |
|
scilab
|
academic/scilab: Fix md5sum.
|
2020-06-28 08:16:48 +07:00 |
|
scipy
|
|
|
|
scipy3
|
|
|
|
seaview
|
academic/seaview: Updated for version 5.0.4.
|
2020-09-15 08:42:25 +07:00 |
|
seqkit
|
academic/seqkit: Updated for version 0.13.2.
|
2020-09-15 08:43:09 +07:00 |
|
sequence-analysis
|
|
|
|
Shark
|
academic/Shark: Updated for version 4.0.0.
|
2019-11-23 16:01:56 +07:00 |
|
sigrok-cli
|
|
|
|
siril
|
|
|
|
slatec
|
|
|
|
smath-studio
|
|
|
|
snpEff
|
|
|
|
solfege
|
|
|
|
spades
|
academic/spades: Updated for version 3.14.1.
|
2020-09-15 08:43:44 +07:00 |
|
speedcrunch
|
|
|
|
spiceopus
|
|
|
|
spidey
|
|
|
|
spqr
|
academic/spqr: Updated for SuiteSparse 5.6.0.
|
2020-02-24 06:10:12 +07:00 |
|
squizz
|
|
|
|
staden
|
|
|
|
STAR
|
academic/STAR: Updated for version 2.7.5c.
|
2020-09-04 00:45:32 +07:00 |
|
stellarium
|
|
|
|
stringtie
|
academic/stringtie: Remove template comment from script.
|
2020-01-12 08:47:38 +07:00 |
|
SU2
|
academic/SU2: Fix slack-desc.
|
2020-01-12 08:47:29 +07:00 |
|
suitesparse
|
academic/suitesparse: Updated for version 5.7.2
|
2020-06-01 08:46:27 +07:00 |
|
suitesparseconfig
|
academic/suitesparseconfig: Updated for version 5.6.0.
|
2020-02-24 06:10:11 +07:00 |
|
sundials
|
academic/sundials: Updated for version 5.3.0.
|
2020-06-20 07:59:30 +07:00 |
|
sword
|
academic/sword: Update README.
|
2020-06-28 08:16:51 +07:00 |
|
sword-data-kjv
|
academic/sword-data-kjv: Update README.
|
2020-06-28 08:16:51 +07:00 |
|
t_coffee
|
academic/t_coffee: Updated for version 13.41.0_git28bdc39.
|
2020-01-12 08:48:00 +07:00 |
|
tabix-legacy
|
academic/tabix-legacy: Fixed PRGNAM in build script.
|
2020-01-03 02:06:16 -06:00 |
|
tiemu
|
academic/tiemu: Remove SRCNAM from SlackBuild.
|
2020-06-14 17:45:46 +07:00 |
|
tilem
|
|
|
|
tilem2
|
|
|
|
tkgate
|
|
|
|
topdraw
|
|
|
|
tophat
|
academic/tophat: Updated for version 2.1.2.
|
2019-08-03 07:11:25 +07:00 |
|
treebest-ensembl
|
academic/treebest-ensembl: Added (Tree Building).
|
2020-01-11 20:58:11 +07:00 |
|
TreeGraph
|
academic/TreeGraph: Updated for version 2.15.0_887_beta.
|
2020-01-12 08:48:01 +07:00 |
|
treerecs
|
academic/treerecs: Updated for version 1.2.
|
2020-09-16 07:31:54 +07:00 |
|
treeviewx
|
academic/treeviewx: Updated for version 1.18.4.2171_ac2afe5f8.
|
2020-01-08 05:04:50 +07:00 |
|
trfind
|
academic/trfind: Updated for version 4.09.1.
|
2020-09-16 07:33:44 +07:00 |
|
trimmomatic
|
academic/trimmomatic: Updated for version 0.39.
|
2020-09-16 07:34:27 +07:00 |
|
tuxmath
|
|
|
|
tuxtype2
|
|
|
|
ucsc-blat
|
|
|
|
ugene
|
academic/ugene: Updated for version 35.0.
|
2020-09-16 07:35:05 +07:00 |
|
umfpack
|
academic/umfpack: Updated for version 5.7.9.
|
2020-02-24 06:10:12 +07:00 |
|
units
|
academic/units: Updated for version 2.19.
|
2019-06-09 05:32:07 +07:00 |
|
vcftools
|
|
|
|
verilator
|
academic/verilator: Added (Verilog HDL Simulator).
|
2020-03-20 19:30:05 +07:00 |
|
verilog
|
|
|
|
veusz
|
academic/veusz: Updated for version 3.2.1.
|
2020-04-03 21:11:33 +07:00 |
|
ViennaRNA
|
academic/ViennaRNA: Updated for version 2.4.15.
|
2020-09-04 00:48:52 +07:00 |
|
wehi-cellsymphony
|
|
|
|
wehi-deid
|
|
|
|
wehi-hackit
|
|
|
|
wehi-weasel
|
academic/wehi-weasel: Updated for version 3.7.1.18.
|
2020-09-15 08:24:56 +07:00 |
|
WEVOTE
|
|
|
|
wmcalc
|
|
|
|
WordNet
|
academic/WordNet: Assume maintainership
|
2020-01-18 12:25:03 +07:00 |
|
wxmacmolplt
|
|
|
|
wxMaxima
|
|
|
|
xcircuit
|
academic/xcircuit: Assume maintainership
|
2020-01-18 12:25:03 +07:00 |
|
xephem
|
|
|
|
xflr5
|
academic/xflr5: Updated for version 6.47.
|
2020-01-26 07:11:20 +07:00 |
|
xfoil
|
|
|
|
xiphos
|
academic/xiphos: Fix man location.
|
2020-09-12 13:02:45 +01:00 |
|
xoscope
|
|
|
|
Xyce
|
|
|
|
z3
|
academic/z3: Updated for version 4.8.7.
|
2020-01-12 12:36:18 +07:00 |
|
ZeGrapher
|
|
|
|
zotero
|
academic/zotero: Updated for version 5.0.85.
|
2020-04-01 18:56:51 +07:00 |
