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42 lines
1.2 KiB
Diff
42 lines
1.2 KiB
Diff
Description: Proper type-casting in using seqan::_setBegin().
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Required by newer versions of GCC.
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Forwarded: no
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Author: Ognyan Kulev <ogi@debian.org>
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Last-Update: 2013-04-18
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--- a/pat.h
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+++ b/pat.h
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@@ -82,20 +82,20 @@
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~ReadBuf() {
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clearAll(); reset();
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// Prevent seqan from trying to free buffers
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- _setBegin(patFw, NULL);
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- _setBegin(patRc, NULL);
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- _setBegin(qual, NULL);
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- _setBegin(patFwRev, NULL);
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- _setBegin(patRcRev, NULL);
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- _setBegin(qualRev, NULL);
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- _setBegin(name, NULL);
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+ _setBegin(patFw, (Dna5*)NULL);
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+ _setBegin(patRc, (Dna5*)NULL);
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+ _setBegin(qual, (char*)NULL);
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+ _setBegin(patFwRev, (Dna5*)NULL);
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+ _setBegin(patRcRev, (Dna5*)NULL);
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+ _setBegin(qualRev, (char*)NULL);
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+ _setBegin(name, (char*)NULL);
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for(int j = 0; j < 3; j++) {
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- _setBegin(altPatFw[j], NULL);
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- _setBegin(altPatFwRev[j], NULL);
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- _setBegin(altPatRc[j], NULL);
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- _setBegin(altPatRcRev[j], NULL);
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- _setBegin(altQual[j], NULL);
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- _setBegin(altQualRev[j], NULL);
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+ _setBegin(altPatFw[j], (Dna5*)NULL);
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+ _setBegin(altPatFwRev[j], (Dna5*)NULL);
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+ _setBegin(altPatRc[j], (Dna5*)NULL);
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+ _setBegin(altPatRcRev[j], (Dna5*)NULL);
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+ _setBegin(altQual[j], (char*)NULL);
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+ _setBegin(altQualRev[j], (char*)NULL);
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}
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}
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