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slackbuilds_ponce/academic
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Andrew Clemons 6f958f23e2
academic/openboard: Fix applying patch for -current. 
gzip the patch to preserve line endings from conversion by git.

Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com>

Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2022-05-21 08:25:02 +07:00
..
abntex academic/abntex: Updated for version 20200715_f0a4d3c. 2022-02-27 22:29:04 -06:00
aenig4 All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
aeskulap academic/aeskulap: Fix shebang. 2022-04-09 15:45:58 +07:00
aline All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
aliview academic/aliview: Use zulu-openjdk11. 2022-03-03 15:56:48 +07:00
AlphaPlot academic/AlphaPlot: Added (data analysis and visualization) 2022-04-30 13:51:47 +07:00
amd All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
amplicon All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
amplifx academic/amplifx: Fix download URL. 2022-04-02 12:20:16 -04:00
antiprism academic/antiprism: Remove .la files. 2022-03-08 09:44:26 +07:00
archaeopteryx academic/archaeopteryx: Use zulu-openjdk11. 2022-03-03 15:56:50 +07:00
aris academic/aris: Fix for gcc >= 10.x. 2022-02-27 22:29:04 -06:00
arka All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
armadillo academic/armadillo: Fix download URL, doc dir. 2022-04-02 12:27:10 -04:00
arpack academic/arpack: Disable parallel build. 2022-03-26 01:20:21 +07:00
arpack-ng All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
artha All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
avl All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
avogadroapp academic/avogadroapp: Provide option to build shared/static. 2022-04-30 13:52:02 +07:00
avogadrolibs academic/avogadrolibs: Added (Libraries for Avogadro 2) 2022-04-24 01:47:09 +07:00
bcftools academic/bcftools: Updted to version 1.15.1 2022-04-16 12:12:48 +07:00
bedGraphToBigWig academic/bedGraphToBigWig: Strip binary. 2022-04-04 12:54:04 -04:00
bedtools All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
biblesync All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
bibletime academic/bibletime: Updated for version 3.0.2. 2022-04-16 12:12:42 +07:00
bibus All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
biopython All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
boinc academic/boinc: Upgraded to version 7.18.1 2022-05-07 13:59:13 +07:00
bowtie academic/bowtie: Mark x86 as unsupported. 2022-03-18 00:26:11 +07:00
bowtie2 academic/bowtie2: Mark x86 as unsupported. 2022-03-18 00:26:11 +07:00
bowtie2-legacy academic/bowtie2-legacy: Patch source. 2022-03-03 09:38:11 +00:00
btf All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
bwa All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
cadabra2 All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
CAFS_divergence All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
calc academic/calc: Updated for version 2.14.0.14. 2022-02-06 11:42:42 +07:00
calcoo various: Use zulu jdk builds for REQUIRES. 2022-03-03 15:56:51 +07:00
camd All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
cap3 academic/cap3: Fix docs. 2022-04-05 12:35:39 -04:00
CAPS_coevolution All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
cblas academic/cblas: Updated for version 3.10.0 2021-09-06 08:50:29 +07:00
ccolamd All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
cdo academic/cdo: Updated for version 2.0.4. 2022-02-17 12:59:54 +07:00
celestia academic/celestia: Wrap README at 72 columns. 2022-03-12 14:34:16 -05:00
chartgeany All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
chemtool academic/chemtool: Fix build failure with gcc10. 2022-02-21 02:41:03 -06:00
cholmod All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
cistrome-CEAS All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
cistrome-conductGO All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
cistrome-extra All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
cistrome-MACS academic/cistrome-MACS: Handle content-disposition download. 2022-03-05 00:18:21 +13:00
cistrome-mdseqpos academic/cistrome-mdseqpos: Fix dependency. 2022-02-14 08:06:58 +07:00
clark-ugene All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
cld2 All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
clustalo academic/clustalo: Remove .la files. 2022-03-08 09:44:26 +07:00
clustalw All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
clustalx academic/clustalx: Patch for qt5. 2022-02-27 22:29:05 -06:00
colamd All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
colin academic/colin: Use qt4. 2022-02-27 22:29:05 -06:00
convertall academic/convertall: Fix docs. 2022-04-05 12:28:40 -04:00
copasi All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
cryptominisat All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
csparse All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
cufflinks academic/cufflinks: Fix info file. 2022-03-12 11:26:42 +13:00
cutadapt All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
cvc4 various: Use zulu jdk builds for REQUIRES. 2022-03-03 15:56:51 +07:00
cxsparse All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
dakota academic/dakota: Update BUILD. 2022-04-30 13:51:47 +07:00
Data2FCS academic/Data2FCS: Use zulu-openjdk11. 2022-03-03 15:56:48 +07:00
datamash All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
DendroPy All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
diamond All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
ds9 academic/ds9: Wrap README at 72 columns. 2022-03-12 14:34:33 -05:00
easy_spice All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
ed-v6 academic/ed-v6: Fix github tarball handling. 2022-03-01 19:35:43 +07:00
edsim51di academic/edsim51di: Update DOWNLOAD to https. 2022-03-04 02:48:05 +00:00
EMBASSY academic/EMBASSY: Remove .la files. 2022-03-08 09:44:25 +07:00
EMBOSS academic/EMBOSS: Remove .la files. 2022-03-08 09:44:25 +07:00
engauge academic/engauge: Updated for version 12.1. 2022-02-27 22:29:05 -06:00
ent academic/ent: remove template comment. 2021-10-13 00:51:26 +07:00
eprover All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
equalx academic/equalx: Fix build for qt5. 2021-10-13 00:51:26 +07:00
ess All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
evopedia_qt academic/evopedia_qt: Use qt4. 2022-02-27 22:29:05 -06:00
exonerate All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
extrema academic/extrema: Remove .la files. 2022-03-08 09:44:26 +07:00
fann All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
fastqc various: Use zulu jdk builds for REQUIRES. 2022-03-03 15:56:51 +07:00
FCSalyzer academic/FCSalyzer: Handle url-encoded filenames. 2022-03-05 00:17:45 +13:00
fet academic/fet: Updated for version 6.3.4. 2022-05-14 19:27:59 +07:00
fiji academic/fiji: Fix source name on 32bit. 2022-03-18 00:26:11 +07:00
finchtv All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
fityk academic/fityk: Fix wxPython/wxGTK3 conflict. 2022-03-09 17:20:43 +07:00
flann academic/flann: Fix building with the newer cmake, cleanups. 2022-02-06 15:47:07 +07:00
flexbar academic/flexbar: Update copyright year. 2021-10-16 00:20:48 +07:00
free42 All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
FreeFem academic/FreeFem: Updated for version 4.11. 2022-04-24 01:47:24 +07:00
g3data academic/g3data: Update github tarball handling. 2022-03-01 19:35:44 +07:00
Gabedit academic/Gabedit: Added (Graphical UI to computational chemistry) 2022-04-09 15:45:56 +07:00
galculator All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
gaw3 All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
Gblocks academic/Gblocks: Fix download. 2022-02-27 22:29:06 -06:00
gchemutils academic/gchemutils: Fix typo in script. 2022-03-09 14:41:35 -05:00
gcompris-qt academic/gcompris-qt: Updated for version 2.4. 2022-04-24 01:47:19 +07:00
geda-gaf academic/geda-gaf: Remove .la files. 2022-03-08 09:44:26 +07:00
gelemental academic/gelemental: Remove .la files. 2022-03-08 09:44:27 +07:00
geneconv All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
genius academic/genius: Updated for version 1.0.27. 2022-02-27 22:29:05 -06:00
genometools All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
genpak academic/genpak: Fix docs. 2022-04-09 15:45:11 +07:00
GeoGebra academic/GeoGebra: Use zulu-openjdk7. 2022-03-03 15:56:45 +07:00
geomview academic/geomview: Remove .la files. 2022-03-08 09:44:27 +07:00
gerbv academic/gerbv: Remove .la files. 2022-03-08 09:44:27 +07:00
getdp academic/getdp: Update README. 2022-04-30 13:51:58 +07:00
getfem academic/getfem: Fix slack-desc. 2022-04-30 13:51:43 +07:00
ggobi academic/ggobi: Updated for version 2.1.11. 2022-03-09 17:20:42 +07:00
ghemical academic/ghemical: Fix build. 2022-02-27 22:29:05 -06:00
glpk academic/glpk: Remove .la files. 2022-03-08 09:44:25 +07:00
gmsh academic/gmsh: Updated for version 4.10.0. 2022-04-30 13:52:13 +07:00
gnucap All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
gp2fasta academic/gp2fasta: Use qt4. 2022-02-27 22:29:05 -06:00
gpredict academic/gpredict: revert to latest stable version 2.2.1 2022-02-24 22:05:13 +07:00
grace All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
gresistor All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
gretl academic/gretl: Remove .la files. 2022-03-08 09:44:27 +07:00
gri All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
Gridcoin-Research academic/Gridcoin-Research: Remove NUMJOBS per maillist 2022-04-09 15:46:02 +07:00
grpn All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
gspiceui academic/gspiceui: Depend on wxGTK3 instead of wxPython3 2021-10-02 16:50:37 +07:00
gtkwave academic/gtkwave: Updated for version 3.3.111. 2022-02-27 22:29:05 -06:00
gtypist All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
gwyddion academic/gwyddion: Updated for version 2.61. 2022-05-07 13:59:32 +07:00
h5utils All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
harminv academic/harminv: Remove .la files. 2022-03-08 09:44:27 +07:00
HMMER All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
hyphy All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
IGV All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
io_lib academic/io_lib: Remove .la files. 2022-03-08 09:44:28 +07:00
irsim All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
isoelectric-point academic/isoelectric-point: Use qt4. 2022-02-27 22:29:06 -06:00
iTest academic/iTest: Use qt4. 2022-02-27 22:29:06 -06:00
itex2mml All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
ITK academic/ITK: Update the internal patch for gcc 11.x. 2021-08-19 18:33:48 +07:00
jalview academic/jalview: Use zulu-openjdk11. 2022-03-03 15:56:49 +07:00
jellyfish_k-mer academic/jellyfish_k-mer: Remove .la files. 2022-03-08 09:44:28 +07:00
jpicedt various: Use zulu jdk builds for REQUIRES. 2022-03-03 15:56:51 +07:00
jugglinglab various: Use zulu jdk builds for REQUIRES. 2022-03-03 15:56:51 +07:00
karma academic/karma: Allow ARCH=i586 in environment. 2022-03-20 20:45:13 +07:00
kiwisolver All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
klavaro academic/klavaro: Updated for version 3.11. 2022-02-17 12:58:30 +07:00
klu All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
knime All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
kraken All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
Kst academic/Kst: patch to fix the path for H5Cpp.h file 2022-03-03 15:56:37 +07:00
ktikz All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
kurso academic/kurso: x86 is unsupported. 2022-03-12 11:30:45 +13:00
labplot2 academic/labplot2: Updated for version 2.9.0. 2022-05-14 19:28:00 +07:00
ladr academic/ladr: Wrap README at 72 columns. 2022-03-12 14:35:24 -05:00
lalnview All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
lapack95 All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
lapacke academic/lapacke: Updated for version 3.10.0 2021-09-06 08:50:29 +07:00
latex2html All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
ldl All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
libghemical academic/libghemical: Remove .la files. 2022-03-08 09:44:28 +07:00
link-grammar academic/link-grammar: Remove .la files. 2022-03-08 09:44:28 +07:00
locarna academic/locarna: Remove .la files. 2022-03-08 09:44:28 +07:00
lpsolve All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
mafft All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
magic All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
mathics academic/mathics: Updated for version 4.0.0. 2022-04-02 18:19:15 +07:00
mathjax2 academic/mathjax2: Fix github tarball handling. 2022-03-01 19:35:44 +07:00
mathomatic All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
matio academic/matio: Remove .la files. 2022-03-08 09:44:28 +07:00
maxima All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
meep academic/meep: Remove .la files. 2022-03-08 09:44:28 +07:00
megax All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
meme-db-gomo All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
meme-db-motif All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
meme-db-tgene All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
meme-suite academic/meme-suite: Remove python3 dep (part of slackware). 2022-02-14 08:06:58 +07:00
mendeleydesktop All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
MetaPhlAn2 All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
metis All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
mkDSSP academic/mkDSSP: Updated for version 4.0.3, switch to cmake. 2022-02-07 23:04:38 +07:00
molequeue academic/molequeue: Updated for version 0.9.0. 2022-04-24 01:47:09 +07:00
mpb academic/mpb: Remove .la files. 2022-03-08 09:44:29 +07:00
mrbayes All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
muscle All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
ncbi-blast All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
ncbi-blast+ academic/ncbi-blast+: Fix build on i586. 2022-03-18 00:26:12 +07:00
ncbi-rmblastn academic/ncbi-rmblastn: Allow ARCH=i586 in environment. 2022-03-20 20:45:13 +07:00
nco academic/nco: Updated for version 5.0.7. 2022-05-07 13:59:27 +07:00
ncview All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
ngspice academic/ngspice: Updated for version 36. 2022-04-02 18:18:57 +07:00
novocraft academic/novocraft: files update. 2021-10-16 00:19:04 +07:00
octave academic/octave: Wrap README at 72 columns. 2022-03-12 14:35:56 -05:00
openboard academic/openboard: Fix applying patch for -current. 2022-05-21 08:25:02 +07:00
OpenFOAM academic/OpenFOAM: Updated for version 9. 2022-04-09 15:45:56 +07:00
pal2nal All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
paml All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
pamlX academic/pamlX: Use qt4. 2022-02-27 22:29:06 -06:00
papi academic/papi: Updated for version 6.0.0.1. 2022-02-27 22:29:06 -06:00
pari All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
parmetis All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
patsy All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
pcalc All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
pcb All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
perlprimer All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
petsc academic/petsc: Added (toolkit for scientific computation). 2022-04-24 01:47:24 +07:00
PhyML All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
pianobooster academic/pianobooster: Added the dependency ftgl. 2022-02-27 22:29:06 -06:00
plasmidomics All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
primer3 All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
pspp academic/pspp: Updated for version 1.4.1. 2022-02-27 22:29:06 -06:00
pulseview academic/pulseview: Updated for version 20220225_4efbe9b. 2022-02-27 22:29:06 -06:00
PyAMG All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
pyCRAC academic/pyCRAC: Update MD5SUM. 2022-03-04 03:30:43 +00:00
pyfits All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
pysam academic/pysam: Use internal htslib-1.14 2022-03-05 08:20:12 +07:00
qalculate-gtk All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
qcl All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
qhull All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
qrupdate academic/qrupdate: Wrap README at 72 columns. 2022-03-12 14:36:23 -05:00
qucs academic/qucs: Align to template. 2022-03-26 11:46:45 +13:00
R academic/R: Updated for version 4.2.0. 2022-05-14 19:27:54 +07:00
RAxML All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
rbio All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
reduce-algebra All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
RepeatMasker All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
root academic/root: Actually install doinst.sh. 2022-03-17 12:38:15 -04:00
rpy2 academic/rpy2: Updated to version 3.5.1. 2022-04-24 01:47:15 +07:00
sage academic/sage: Updated for version 9.4 2022-01-17 09:00:27 +07:00
sage-bin academic/sage-bin: Fix quote. 2022-02-12 13:31:15 +07:00
samtools academic/samtools: Updated to version 1.15.1 2022-04-16 12:12:48 +07:00
samtools-legacy All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
scidavis academic/scidavis: Update DEPS and infomation in the build script 2021-12-31 08:27:05 +07:00
scilab various: Use zulu jdk builds for REQUIRES. 2022-03-03 15:56:51 +07:00
scipy academic/scipy: Updated for version 1.2.2. 2022-01-22 08:22:58 +07:00
scipy3 academic/scipy3: Updated for version 1.8.0. New maintainer. 2022-04-09 15:45:55 +07:00
seaview academic/seaview: Removed the treerecs dependency (ftb). 2022-03-01 19:35:45 +07:00
seqkit All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
SeqMonk All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
sequence-analysis academic/sequence-analysis: Use zulu-openjdk11. 2022-03-03 15:56:49 +07:00
Shark All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
sigrok-cli academic/sigrok-cli: Updated for version 20220222_525f481. 2022-03-01 19:35:46 +07:00
siril academic/siril: Fix VERSION. 2022-03-12 11:36:35 +13:00
smath-studio academic/smath-studio: Updated email 2022-01-22 08:22:59 +07:00
snpEff academic/snpEff: Use zulu-openjdk11. 2022-03-03 15:56:49 +07:00
solfege All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
spades All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
speedcrunch All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
spiceopus All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
spidey All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
spqr academic/spqr: Wrap README at 72 columns. 2022-03-12 14:38:22 -05:00
squizz academic/squizz: Remove .la files. 2022-03-08 09:44:29 +07:00
staden All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
STAR academic/STAR: Updated to version 2.7.10a 2022-02-02 23:24:38 +07:00
stellarium All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
stringtie All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
SU2 academic/SU2: Mark as 64-bit only. 2022-03-26 01:20:12 +07:00
suitesparse academic/suitesparse: Updated for version 5.11.0 2022-04-09 15:46:03 +07:00
suitesparseconfig All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
sundials All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
sword academic/sword: Updated for version 1.9.0. 2022-04-16 12:12:42 +07:00
sword-data-kjv academic/sword-data-kjv: Updated for version 1.9.0_1. 2022-04-16 12:12:42 +07:00
t_coffee academic/t_coffee: Updated for version 13.45.58.c355d11. 2022-03-01 19:35:46 +07:00
tabix-legacy All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
tiemu All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
tilem academic/tilem: Fix for gcc >= 10.x. 2022-03-01 19:35:46 +07:00
tilem2 All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
tkgate All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
topdraw All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
tophat academic/tophat: Use -std=c++14. 2022-03-03 09:38:11 +00:00
treebest-ensembl academic/treebest-ensembl: Wrap README at 72 columns. 2022-03-12 14:40:15 -05:00
TreeGraph academic/TreeGraph: Use zulu-openjdk11. 2022-03-03 15:56:48 +07:00
treeviewx All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
trfind All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
trimmomatic academic/trimmomatic: Use zulu-openjdk11. 2022-03-03 15:56:49 +07:00
tuxmath academic/tuxmath: Rename blits. Remove dupe lan player. 2022-03-04 09:46:12 +00:00
tuxtype2 All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
ucsc-blat All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
ugene academic/ugene: Mark 32bit as UNSUPPORTED. 2022-03-26 01:20:15 +07:00
umfpack academic/umfpack: Wrap README at 72 columns. 2022-03-12 14:40:59 -05:00
units academic/units: updated for version 2.21 2021-08-01 00:35:44 +07:00
vcftools All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
verilator academic/verilator: Make slack-desc ASCII. 2022-03-17 12:38:15 -04:00
verilog academic/verilog: Updated for version 11.0. 2022-03-03 10:24:49 +00:00
veusz All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
ViennaRNA academic/ViennaRNA: Remove .la files. 2022-03-08 09:44:25 +07:00
wehi-cellsymphony academic/wehi-cellsymphony: Use zulu-openjdk11. 2022-03-03 15:56:49 +07:00
wehi-deid academic/wehi-deid: Use zulu-openjdk11. 2022-03-03 15:56:49 +07:00
wehi-hackit academic/wehi-hackit: Use zulu-openjdk11. 2022-03-03 15:56:49 +07:00
wehi-weasel academic/wehi-weasel: Use zulu-openjdk11. 2022-03-03 15:56:48 +07:00
WEVOTE All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
wmcalc academic/wmcalc: remove template comment. 2021-10-13 00:51:26 +07:00
WordNet All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
wxMaxima academic/wxMaxima: Fix github tarball handling. 2022-03-01 19:35:44 +07:00
x48 academic/x48: Added (HP48 Calculator emulator) 2022-04-30 13:51:49 +07:00
xcircuit All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
xephem All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
xflr5 academic/xflr5: Updated for version 6.54. 2022-04-16 12:12:52 +07:00
xfoil academic/xfoil: Updated the patch to fix build. 2021-08-14 21:18:00 +07:00
xiphos academic/xiphos: Fix build. 2022-04-16 12:12:49 +07:00
xoscope All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
xsimd academic/xsimd: Updated for version 8.1.0. 2022-05-14 19:27:54 +07:00
z3 academic/z3: Updated for version 4.8.12. 2022-03-26 01:20:12 +07:00
ZeGrapher All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
zotero All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00