academic/mkDSSP: Updated for version 4.0.3, switch to cmake.

Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>

Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>

academic/mkDSSP/mkDSSP.SlackBuild

@@ -25,13 +25,12 @@
 cd $(dirname $0) ; CWD=$(pwd)
 
 PRGNAM=mkDSSP
-VERSION=${VERSION:-4.0_git6338c83}
+VERSION=${VERSION:-4.0.3}
 BUILD=${BUILD:-1}
 TAG=${TAG:-_SBo}
 PKGTYPE=${PKGTYPE:-tgz}
 
 SRCNAM=dssp
-COMMIT="6338c836b631e87fc03bd147ec67d27ea72f6f70"
 
 if [ -z "$ARCH" ]; then
   case "$( uname -m )" in
@@ -72,9 +71,9 @@ set -e
 rm -rf $PKG
 mkdir -p $TMP $PKG $OUTPUT
 cd $TMP
-rm -rf $SRCNAM-$COMMIT
-tar xvf $CWD/$SRCNAM-$COMMIT.tar.gz
-cd $SRCNAM-$COMMIT
+rm -rf $SRCNAM-$VERSION
+tar xvf $CWD/$SRCNAM-$VERSION.tar.gz
+cd $SRCNAM-$VERSION
 chown -R root:root .
 find -L . \
  \( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 \
@@ -82,20 +81,20 @@ find -L . \
  \( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \
  -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
 
-CFLAGS="$SLKCFLAGS" \
-CXXFLAGS="$SLKCFLAGS" \
-./configure \
-  --prefix=/usr \
-  --libdir=/usr/lib${LIBDIRSUFFIX} \
-  --sysconfdir=/etc \
-  --localstatedir=/var \
-  --disable-revision \
-  --mandir=/usr/man \
-  --docdir=/usr/doc/$PRGNAM-$VERSION \
-  --build=$ARCH-slackware-linux
+sed -i "s|CMAKE_INSTALL_DATADIR}/man|CMAKE_INSTALL_PREFIX}/man|" CMakeLists.txt
 
-make
-make install DESTDIR=$PKG mandir=$PKG/usr/man
+mkdir -p build
+cd build
+  cmake \
+    -DCMAKE_C_FLAGS:STRING="$SLKCFLAGS" \
+    -DCMAKE_CXX_FLAGS:STRING="$SLKCFLAGS" \
+    -DCMAKE_INSTALL_PREFIX=/usr \
+    -DLIB_SUFFIX=${LIBDIRSUFFIX} \
+    -DBUILD_SHARED_LIBS=ON \
+    -DCMAKE_BUILD_TYPE=Release ..
+  make
+  make install DESTDIR=$PKG
+cd ..
 
 # Some programs (like aline) expect the binary to be called just "dssp"
 cd $PKG/usr/bin
@@ -105,6 +104,9 @@ cd -
 find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | grep ELF \
   | cut -f 1 -d : | xargs strip --strip-unneeded 2> /dev/null || true
 
+find $PKG/usr/man -type f -exec gzip -9 {} \;
+for i in $( find $PKG/usr/man -type l ) ; do ln -s $( readlink $i ).gz $i.gz ; rm $i ; done
+
 mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION
 cp -a \
   LICENSE README.md \

academic/mkDSSP/mkDSSP.info

@@ -1,8 +1,8 @@
 PRGNAM="mkDSSP"
-VERSION="4.0_git6338c83"
+VERSION="4.0.3"
 HOMEPAGE="https://swift.cmbi.umcn.nl/gv/dssp/DSSP_3.html"
-DOWNLOAD="https://github.com/PDB-REDO/dssp/archive/6338c83/dssp-6338c836b631e87fc03bd147ec67d27ea72f6f70.tar.gz"
-MD5SUM="c4616197bb510c36f1c4dcce018e870d"
+DOWNLOAD="https://github.com/PDB-REDO/dssp/archive/v4.0.3/dssp-4.0.3.tar.gz"
+MD5SUM="fac80f6b2ca0120c414510b420dc5b6a"
 DOWNLOAD_x86_64=""
 MD5SUM_x86_64=""
 REQUIRES="libcifpp"