| .. |
|
abntex
|
|
|
|
aline
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
amd
|
academic/amd: BUILD bump for SuiteSparse 4.4.6.
|
2016-01-09 07:12:48 +07:00 |
|
amplicon
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
amplifx
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
antiprism
|
academic/antiprism: Fix DOWNLOAD.
|
2016-06-04 01:20:45 +07:00 |
|
archeopteryx
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
aris
|
|
|
|
arka
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
armadillo
|
academic/armadillo: Updated for version 7.100.3.
|
2016-06-04 01:20:45 +07:00 |
|
arpack
|
|
|
|
arpack-ng
|
|
|
|
artha
|
|
|
|
avogadro
|
academic/avogadro: Updated for version 1.2.0
|
2016-08-20 07:51:32 +07:00 |
|
bedGraphToBigWig
|
academic/bedGraphToBigWig: Added (Convert bedGraph to bigWig file)
|
2016-06-05 22:21:58 +07:00 |
|
bedtools
|
|
|
|
biblesync
|
academic/biblesync: Switch to i586.
|
2016-10-02 23:28:47 +07:00 |
|
bibletime
|
academic/bibletime: Updated for version 2.11_rc2.
|
2016-10-01 07:17:40 +07:00 |
|
bibus
|
|
|
|
bowtie
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
bowtie2
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
btf
|
academic/btf: BUILD bump for SuiteSparse 4.4.6.
|
2016-01-09 07:12:48 +07:00 |
|
bwa
|
academic/bwa: Updated for version 0.7.13
|
2016-06-05 22:21:58 +07:00 |
|
calc
|
academic/calc: Updated for version 2.12.5.4.
|
2016-07-25 04:36:25 +07:00 |
|
calcoo
|
|
|
|
camd
|
academic/camd: BUILD bump for SuiteSparse 4.4.6.
|
2016-01-09 07:12:48 +07:00 |
|
cap3
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
cblas
|
academic/cblas: Updated for version 3.6.1.
|
2016-10-08 08:07:33 +07:00 |
|
ccolamd
|
academic/ccolamd: BUILD bump for SuiteSparse 4.4.6.
|
2016-01-09 07:12:48 +07:00 |
|
celestia
|
academic/celestia: Patched for libpng16.
|
2016-01-17 09:40:16 +07:00 |
|
chemtool
|
|
|
|
cholmod
|
academic/cholmod: Fix underlinking against gfortran libraries.
|
2016-10-29 06:58:11 +07:00 |
|
cistrome-CEAS
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
cistrome-conductGO
|
academic/cistrome-conductGO: Added (find the highest expressed TFs)
|
2016-06-05 22:21:58 +07:00 |
|
cistrome-extra
|
academic/cistrome-extra: Added (Cistrome extra apps)
|
2016-06-05 22:21:58 +07:00 |
|
cistrome-MACS
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
cistrome-mdseqpos
|
academic/cistrome-mdseqpos: Added (Cistrome mdseqpos)
|
2016-06-05 22:27:47 +07:00 |
|
cld2
|
academic/cld2: Updated for version 20150820.
|
2016-01-26 18:59:05 +07:00 |
|
clustalo
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
clustalw
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
clustalx
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
colamd
|
academic/colamd: BUILD bump for SuiteSparse 4.4.6.
|
2016-01-09 07:12:48 +07:00 |
|
convertall
|
|
|
|
copasi
|
|
|
|
coq
|
academic/coq: Updated for version 8.5pl1.
|
2016-07-20 14:20:08 -05:00 |
|
csparse
|
academic/csparse: BUILD bump for SuiteSparse 4.4.6.
|
2016-01-09 07:12:48 +07:00 |
|
cufflinks
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
cutadapt
|
academic/cutadapt: Updated for version 1.9.1
|
2016-06-05 22:27:53 +07:00 |
|
cxsparse
|
academic/cxsparse: BUILD bump for SuiteSparse 4.4.6.
|
2016-01-09 07:12:48 +07:00 |
|
drawtiming
|
|
|
|
edsim51di
|
academic/edsim51di: Moved from development.
|
2016-08-03 06:59:27 +07:00 |
|
EMBASSY
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
EMBOSS
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
engauge
|
academic/engauge: Fixed tarball handling.
|
2016-11-11 20:36:22 +00:00 |
|
ent
|
academic/ent: i486 => i586.
|
2016-08-20 07:50:03 +07:00 |
|
equalx
|
|
|
|
ess
|
|
|
|
evopedia_qt
|
|
|
|
extrema
|
|
|
|
fann
|
academic/fann: Fix .pc file location.
|
2016-01-07 00:24:13 +00:00 |
|
fastqc
|
academic/fastqc: Updated for version 0.11.5
|
2016-06-05 22:27:54 +07:00 |
|
fet
|
academic/fet: Updated for version 5.30.5.
|
2016-11-14 16:41:57 +07:00 |
|
finchtv
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
flann
|
|
|
|
flashqard
|
academic/flashqard: Patched to build on -current.
|
2016-01-17 09:40:16 +07:00 |
|
free42
|
academic/free42: Fixed md5sum
|
2016-07-30 08:28:43 +07:00 |
|
freechartgeany
|
academic/freechartgeany: Updated for version 2.0.3
|
2016-08-05 18:10:51 +01:00 |
|
g3data
|
|
|
|
galculator
|
academic/galculator: Switch to i586.
|
2016-09-25 07:04:49 +07:00 |
|
gaw3
|
|
|
|
Gblocks
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
gcalctool
|
|
|
|
gchemutils
|
academic/gchemutils: Updated for version 0.14.12
|
2016-06-05 22:27:54 +07:00 |
|
gcompris
|
academic/gcompris: Switch to i586.
|
2016-09-25 07:04:49 +07:00 |
|
geda-gaf
|
|
|
|
gelemental
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
geneconv
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
genius
|
academic/genius: Force std=gnu89 in CFLAGS/CXXFLAGS.
|
2016-01-17 09:40:16 +07:00 |
|
genometools
|
academic/genometools: version bump
|
2016-02-05 07:02:20 +07:00 |
|
genpak
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
GeoGebra
|
academic/GeoGebra: Updated for version 5.0.253.0.
|
2016-06-27 07:54:25 +07:00 |
|
geomview
|
|
|
|
gerbv
|
|
|
|
ggobi
|
|
|
|
ghemical
|
|
|
|
glpk
|
|
|
|
gnucap
|
|
|
|
gp2fasta
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
gpredict
|
|
|
|
grace
|
|
|
|
gresistor
|
|
|
|
gretl
|
academic/gretl: Fixed md5sums of pdf files
|
2016-07-30 08:28:43 +07:00 |
|
grpn
|
academic/grpn: Fixed build with gcc-5.2.0.
|
2016-01-17 09:40:16 +07:00 |
|
gspiceui
|
|
|
|
gtkwave
|
|
|
|
gtypist
|
|
|
|
gwyddion
|
academic/gwyddion: Add more patches.
|
2016-11-04 19:43:11 +07:00 |
|
ij-plugins-LOCI
|
academic/ij-plugins-LOCI: Updated for version 5.1.9
|
2016-06-05 22:27:55 +07:00 |
|
ij-plugins-UCSD
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
ImageJ
|
academic/ImageJ: Updated for version 1.50
|
2016-06-05 22:27:56 +07:00 |
|
io_lib
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
irsim
|
academic/irsim: Added (A digital circuit simulator).
|
2016-09-03 07:17:24 +07:00 |
|
isoelectric-point
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
iTest
|
|
|
|
itex2mml
|
academic/itex2mml: Updated for version 1.5.1.
|
2016-01-17 09:40:16 +07:00 |
|
jalview
|
academic/jalview: Remove p7zip dep.
|
2016-07-17 07:48:52 +07:00 |
|
jpicedt
|
|
|
|
jugglinglab
|
|
|
|
kile
|
|
|
|
klavaro
|
|
|
|
klu
|
academic/klu: Updated for version 1.3.3.
|
2016-01-09 07:12:48 +07:00 |
|
knime
|
|
|
|
Kst
|
academic/Kst: Patched for gsl-2.1.
|
2016-01-17 09:40:16 +07:00 |
|
ktikz
|
academic/ktikz: Fix HOMEPAGE and DOWNLOAD.
|
2016-06-04 01:20:45 +07:00 |
|
kurso
|
|
|
|
labplot2
|
academic/labplot2: Updated for version 2.3.0.
|
2016-09-23 05:07:20 +07:00 |
|
ladr
|
|
|
|
lalnview
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
lapack95
|
|
|
|
lapacke
|
academic/lapacke: Added (C interface to LAPACK).
|
2016-10-14 22:20:02 +07:00 |
|
ldl
|
academic/ldl: BUILD bump for SuiteSparse 4.4.6.
|
2016-01-09 07:12:48 +07:00 |
|
libghemical
|
|
|
|
libqalculate
|
academic/libqalculate: Added (desktop caculator library).
|
2016-09-04 09:13:42 +07:00 |
|
link-grammar
|
|
|
|
loggerpro
|
academic/loggerpro: Added (data-collection and analysis software)
|
2016-03-20 07:37:55 +07:00 |
|
lpsolve
|
academic/lpsolve: Patched to fix build failure.
|
2016-04-12 17:34:23 +07:00 |
|
mafft
|
academic/mafft: Updated for version 7.273
|
2016-06-05 22:27:57 +07:00 |
|
magic
|
academic/magic: Added (A VLSI layout design tool).
|
2016-09-03 07:17:24 +07:00 |
|
mathics
|
Multiple: Fix .info and README (Cython refs)
|
2016-01-17 09:40:16 +07:00 |
|
mathomatic
|
|
|
|
maxima
|
academic/maxima: Update MD5SUM.
|
2016-08-03 07:29:26 +07:00 |
|
mendeleydesktop
|
academic/mendeleydesktop: Updated for version 1.16.2.
|
2016-08-28 00:22:59 +01:00 |
|
metis
|
|
|
|
mkDSSP
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
Mnemosyne
|
|
|
|
mpmath
|
|
|
|
mrbayes
|
academic/mrbayes: version bump
|
2016-02-05 07:02:20 +07:00 |
|
muscle
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
ncbi-blast
|
academic/ncbi-blast: Fix DOWNLOAD.
|
2016-06-04 01:20:45 +07:00 |
|
ncbi-blast-plus
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
ngspice
|
|
|
|
octave
|
|
|
|
paml
|
academic/paml: Updated for version 4.9a
|
2016-06-05 22:27:59 +07:00 |
|
pamlX
|
academic/pamlX: Updated against paml 4.9a
|
2016-06-05 22:27:59 +07:00 |
|
parmetis
|
|
|
|
patsy
|
Multiple: Fixed .info file (removed pysetuptools)
|
2016-01-17 09:40:16 +07:00 |
|
pcb
|
|
|
|
perlprimer
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
PhyML
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
pianobooster
|
academic/pianobooster: i486 => i586.
|
2016-08-20 07:50:03 +07:00 |
|
plasmidomics
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
primer3
|
academic/primer3: Updated for version 2.3.7
|
2016-06-05 22:28:01 +07:00 |
|
pspp
|
academic/pspp: Updated for version 0.10.2.
|
2016-08-28 18:30:33 +07:00 |
|
pulseview
|
|
|
|
PyAMG
|
|
|
|
pyfits
|
|
|
|
qalculate-gtk
|
academic/qalculate-gtk: Added (GUI for libqalculate).
|
2016-09-04 09:15:59 +07:00 |
|
qhull
|
|
|
|
qrupdate
|
|
|
|
QtiPlot
|
academic/QtiPlot: correct a few paths
|
2016-02-05 07:02:20 +07:00 |
|
qtoctave
|
|
|
|
qucs
|
|
|
|
R
|
academic/R: Updated for version 3.3.1.
|
2016-06-25 07:29:02 +07:00 |
|
rbio
|
academic/rbio: BUILD bump for SuiteSparse 4.4.6.
|
2016-01-09 07:12:48 +07:00 |
|
reduce-algebra
|
academic/reduce-algebra: Updated for version 20161022svn3821.
|
2016-10-28 05:45:13 +07:00 |
|
root
|
academic/root: Updated for version 5.34.36.
|
2016-04-19 22:47:49 +07:00 |
|
sage
|
academic/sage: Updated for version 7.3.
|
2016-08-05 17:42:16 +07:00 |
|
samtools
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
scilab
|
academic/scilab: Fix .pc file location.
|
2016-01-07 01:39:05 +00:00 |
|
scipy
|
academic/scipy: Updated for version 0.18.0.
|
2016-08-28 00:22:40 +01:00 |
|
scipy3
|
academic/scipy3: Added (python library).
|
2016-08-28 00:22:40 +01:00 |
|
seaview
|
academic/seaview: Updated for version 4.6
|
2016-06-05 22:28:02 +07:00 |
|
sequence-analysis
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
sigrok-cli
|
|
|
|
slatec
|
|
|
|
smath-studio
|
|
|
|
snpEff
|
academic/snpEff: version bump
|
2016-02-05 07:02:20 +07:00 |
|
solfege
|
|
|
|
spades
|
academic/spades: Updated for version 3.7.1
|
2016-06-05 22:28:03 +07:00 |
|
speedcrunch
|
|
|
|
spiceopus
|
|
|
|
spidey
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
spqr
|
academic/spqr: Updated for version 2.0.2.
|
2016-01-09 07:12:48 +07:00 |
|
squizz
|
academic/squizz: Update MD5SUM.
|
2016-06-04 01:20:45 +07:00 |
|
staden
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
stellarium
|
academic/stellarium: Updated for version 0.15.0.
|
2016-10-03 07:40:14 +07:00 |
|
suitesparse
|
|
|
|
suitesparseconfig
|
academic/suitesparseconfig: Updated for version 4.4.6.
|
2016-01-09 07:12:48 +07:00 |
|
sundials
|
academic/sundials: Use /usr/lib64 on x86_64.
|
2016-01-07 01:40:19 +00:00 |
|
sword
|
academic/sword: Updated for version 1.7.5a1.
|
2016-10-01 07:17:38 +07:00 |
|
sword-data-kjv
|
academic/sword-data-kjv: Updated for version 1.7.5.
|
2016-10-01 07:17:39 +07:00 |
|
sympy
|
|
|
|
t_coffee
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
tabix
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
tilem
|
|
|
|
tilem2
|
|
|
|
tkgate
|
|
|
|
topdraw
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
tophat
|
academic/tophat: Updated for version 2.1.1
|
2016-06-05 22:28:03 +07:00 |
|
treeview
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
tuxmath
|
|
|
|
tuxtype2
|
|
|
|
ucsc-blat
|
Multiple: update email, year and slack-desc
|
2016-01-17 09:40:16 +07:00 |
|
ugene
|
academic/ugene: Update DEP and patched for GCC.
|
2016-06-24 16:13:02 +07:00 |
|
umfpack
|
academic/umfpack: Fix underlinking against gfortran libraries.
|
2016-10-29 06:58:11 +07:00 |
|
units
|
academic/units: Updated for version 2.13.
|
2016-10-27 06:17:12 +07:00 |
|
vcftools
|
academic/vcftools: Fix DOWNLOAD.
|
2016-06-08 11:36:10 +01:00 |
|
verilog
|
|
|
|
veusz
|
academic/veusz: Updated for version 1.24.
|
2016-08-28 00:22:59 +01:00 |
|
wmcalc
|
academic/wmcalc: Updated for version 0.6.
|
2016-10-15 07:10:10 +07:00 |
|
WordNet
|
|
|
|
wxmacmolplt
|
academic/wxmacmolplt: Updated for version 7.6.2.
|
2016-08-03 07:27:59 +07:00 |
|
wxMaxima
|
academic/wxMaxima: Updated for version 16.04.2
|
2016-08-05 18:10:51 +01:00 |
|
xcircuit
|
|
|
|
xephem
|
academic/xephem: Updated for version 3.7.7.
|
2016-06-04 01:20:45 +07:00 |
|
xiphos
|
academic/xiphos: Switch to i586.
|
2016-10-02 23:29:46 +07:00 |
|
xoscope
|
|
|
|
Xyce
|
academic/Xyce: Updated for version 6.5.
|
2016-06-09 07:44:09 +07:00 |
|
zotero
|
academic/zotero: Updated for version 4.0.29.5
|
2016-06-05 22:28:06 +07:00 |
