| .. |
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3D-ICE
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academic/3D-ICE: Added (Thermal Emulator Library).
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2022-12-03 11:30:33 +07:00 |
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abntex
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aenig4
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aeskulap
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aline
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aliview
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AlphaPlot
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amd
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amplicon
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amplifx
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antiprism
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archaeopteryx
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aris
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arka
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armadillo
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arpack
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arpack-ng
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artha
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avl
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avogadroapp
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avogadrolibs
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bcftools
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academic/bcftools: Upgrade to version 1.16
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2022-10-15 09:25:31 +07:00 |
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bedGraphToBigWig
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bedtools
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biblesync
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bibletime
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bibus
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biopython
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academic/biopython: Fix deps.
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2022-11-12 22:33:12 +07:00 |
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boinc
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academic/boinc: Updated for version 7.20.5
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2022-12-10 07:43:15 +07:00 |
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bowtie
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academic/bowtie: Updated for version 1.3.1.
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2022-10-15 10:47:26 +07:00 |
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bowtie2
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academic/bowtie2: ugraded to version 2.5.0
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2022-11-24 22:13:28 +07:00 |
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bowtie2-legacy
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bpp-core
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academic/bpp-core: Added (Bio++ Core Library)
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2022-09-08 08:11:03 +01:00 |
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bpp-phyl
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academic/bpp-phyl: Added (Bio++ Phylogenetic Library)
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2022-09-08 08:11:03 +01:00 |
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bpp-phyl-omics
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academic/bpp-phyl-omics: Added (Bio++ Phylogenetic Omics Library)
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2022-09-08 08:11:04 +01:00 |
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bpp-popgen
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academic/bpp-popgen: Added (Bio++ Population Genetics Library)
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2022-09-08 08:11:04 +01:00 |
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bpp-seq
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academic/bpp-seq: Added (Bio++ Sequence library)
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2022-09-08 08:11:03 +01:00 |
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bpp-seq-omics
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academic/bpp-seq-omics: Added (Bio++ Sequence Omics Library)
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2022-09-08 08:11:03 +01:00 |
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bpp1.9-numcalc
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academic/bpp1.9-numcalc: Added (Bio++ 1.9 NumCalc Library)
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2022-09-09 02:55:53 +01:00 |
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bpp1.9-phyl
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academic/bpp1.9-phyl: Added (Bio++ 1.9 Phyl Library)
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2022-09-09 03:07:45 +01:00 |
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bpp1.9-seq
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academic/bpp1.9-seq: Added (Bio++ 1.9 Seq Library)
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2022-09-09 02:58:46 +01:00 |
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bpp1.9-utils
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academic/bpp1.9-utils: Added (Bio++ 1.9 Utils Library)
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2022-09-09 02:53:27 +01:00 |
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bppsuite
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academic/bppsuite: Added (Bio++ program suite)
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2022-09-08 08:11:04 +01:00 |
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btf
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bwa
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cadabra2
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academic/cadabra2: Update README.
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2023-01-07 08:13:38 +07:00 |
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CAFS_divergence
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calc
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calcoo
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camd
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cap3
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CAPS_coevolution
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cblas
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academic/cblas: Updated for version 3.11.0
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2022-11-26 09:11:52 +07:00 |
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ccolamd
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cdo
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academic/cdo: Updated for version 2.1.1.
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2022-12-17 10:50:29 +07:00 |
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celestia
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chartgeany
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chemtool
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cholmod
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cistrome-CEAS
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cistrome-conductGO
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cistrome-extra
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cistrome-MACS
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cistrome-mdseqpos
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academic/cistrome-mdseqpos: Fix deps.
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2022-11-12 22:33:12 +07:00 |
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clark-ugene
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cld2
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clustalo
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clustalw
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clustalx
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colamd
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colin
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convertall
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copasi
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academic/copasi: Updated for version 4.39.272.
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2023-02-04 07:19:52 +07:00 |
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cryptominisat
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academic/cryptominisat: Updated for version 5.11.3.
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2022-10-15 10:47:22 +07:00 |
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csparse
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cufflinks
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cutadapt
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cvc4
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cxsparse
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dakota
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academic/dakota: Updated for version 6.17.0.
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2023-01-28 08:23:05 +07:00 |
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Data2FCS
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datamash
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DendroPy
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academic/DendroPy: Updated for version 4.5.1.
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2022-09-08 08:11:03 +01:00 |
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diamond
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dimod
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academic/dimod: Added (A shared API for samplers)
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2022-11-12 22:32:58 +07:00 |
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DRAMPower
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academic/DRAMPower: Fix github tarball handling.
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2022-11-26 09:11:46 +07:00 |
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DRAMSim2
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academic/DRAMSim2: Added (A cycle accurate DRAM simulator)
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2022-10-15 10:47:28 +07:00 |
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DRAMsim3
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academic/DRAMsim3: Fix github tarball handling.
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2022-11-05 21:15:16 +07:00 |
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DRAMSys
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academic/DRAMSys: Fix github tarball handling.
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2023-01-07 08:13:28 +07:00 |
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ds9
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academic/ds9: Updated for version 8.4.1.
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2023-02-04 07:19:56 +07:00 |
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dwave-cloud-client
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academic/dwave-cloud-client: Added (REST interface for D-Wave API)
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2022-11-12 22:32:58 +07:00 |
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dwave-greedy
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academic/dwave-greedy: Added (steepest descent solver for (BQM))
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2022-11-12 22:32:58 +07:00 |
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dwave-hybrid
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academic/dwave-hybrid: Added (Hybrid Async Decomposition Sampler)
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2022-11-12 22:32:59 +07:00 |
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dwave-inspector
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academic/dwave-inspector: Added (visualize D-Wave structured solver)
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2022-11-12 22:32:59 +07:00 |
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dwave-neal
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academic/dwave-neal: Added (a simulated annealing sampler)
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2022-11-12 22:32:59 +07:00 |
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dwave-networkx
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academic/dwave-networkx: Added (D-Wave Systems network exploration)
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2022-11-12 22:32:59 +07:00 |
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dwave-ocean-sdk
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academic/dwave-ocean-sdk: Fix deps.
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2022-11-19 10:08:09 +07:00 |
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dwave-preprocessing
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academic/dwave-preprocessing: Added (binary quadratic models tools)
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2022-11-12 22:32:59 +07:00 |
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dwave-system
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academic/dwave-system: Added (basic API for D-Wave system)
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2022-11-12 22:32:59 +07:00 |
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dwave-tabu
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academic/dwave-tabu: Added (C/C++ implementation of MST2 for QUBO)
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2022-11-12 22:32:59 +07:00 |
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dwavebinarycsp
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academic/dwavebinarycsp: Added (contruct binary quadratic models)
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2022-11-12 22:32:58 +07:00 |
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easy_spice
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ed-v6
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edsim51di
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elk
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academic/elk: Fix SlackBuild permissions.
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2022-11-12 22:33:05 +07:00 |
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EMBASSY
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EMBOSS
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engauge
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ent
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eprover
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equalx
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ess
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evopedia_qt
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exonerate
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extrema
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fann
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fastqc
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FCSalyzer
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fet
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academic/fet: Updated for version 6.8.4.
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2023-02-18 10:06:44 +07:00 |
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fiji
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finchtv
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fityk
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flann
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flexbar
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free42
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FreeFem
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academic/FreeFem: Updated for version 4.12.
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2023-01-07 08:03:29 +07:00 |
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g3data
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Gabedit
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galculator
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gaw3
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Gblocks
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gchemutils
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gcompris-qt
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academic/gcompris-qt: Updated for version 3.1.
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2023-01-28 08:23:07 +07:00 |
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geda-gaf
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gelemental
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academic/gelemental: Updated for version 2.0.1.
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2022-10-15 10:47:27 +07:00 |
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gem5
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academic/gem5: Added (open-source system-level & CPU simulator)
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2022-10-29 10:28:33 +07:00 |
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geneconv
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genius
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genometools
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genpak
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GeoGebra
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geomview
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academic/geomview: Updated for version 1.9.5.
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2023-02-04 07:19:52 +07:00 |
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gerbv
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getdp
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getfem
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academic/getfem: Fix deps.
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2022-11-12 22:33:19 +07:00 |
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ggobi
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ghemical
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glpk
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glvis
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academic/glvis: Added (finite element visualization tool).
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2022-11-25 14:22:50 +07:00 |
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gmsh
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academic/gmsh: Updated for version 4.11.1.
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2023-01-14 08:50:10 +07:00 |
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gnucap
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gp2fasta
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gpredict
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grace
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academic/grace: Update download url.
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2022-09-10 15:19:08 +07:00 |
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gresistor
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gretl
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gri
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Gridcoin-Research
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academic/Gridcoin-Research: fix md5sum
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2022-12-03 11:46:53 +07:00 |
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gromacs
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academic/gromacs: Added (gromacs project)
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2022-10-01 09:01:15 +07:00 |
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grpn
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gspiceui
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gtkwave
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gtypist
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academic/gtypist: Updated maintainer info.
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2022-11-18 22:02:50 +07:00 |
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gwyddion
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academic/gwyddion: Updated for version 2.62.
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2022-11-12 22:32:56 +07:00 |
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h5utils
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academic/h5utils: Updated for version 1.13.2.
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2023-02-18 10:06:44 +07:00 |
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harminv
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academic/harminv: Updated for version 1.4.2.
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2023-02-18 10:06:44 +07:00 |
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HMMER
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hyphy
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academic/hyphy: Updated for version 2.5.42.
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2022-10-15 10:47:27 +07:00 |
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IGV
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academic/IGV: Updated for version 2.14.1.
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2022-10-15 10:47:27 +07:00 |
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io_lib
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iqtree
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academic/iqtree: Added (Efficient phylogenomic software by ML)
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2022-09-09 04:23:03 +01:00 |
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irsim
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isoelectric-point
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iTest
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itex2mml
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ITK
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jalview
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academic/jalview: Updated for version 2.11.2.4.
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2022-10-15 10:47:27 +07:00 |
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jellyfish_k-mer
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jpicedt
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jugglinglab
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karma
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klavaro
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academic/klavaro: Updated for version 3.14.
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2022-12-31 09:14:42 +07:00 |
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klu
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knime
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kraken
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Kst
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academic/Kst: Fix deps.
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2022-11-12 22:33:14 +07:00 |
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ktikz
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kurso
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labplot2
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ladr
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laghos
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academic/laghos: Added (LAGrangian High-Order Solver)
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2022-12-17 09:13:53 +07:00 |
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lalnview
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lapack95
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lapacke
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academic/lapacke: Updated for version 3.11.0
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2022-11-26 09:11:52 +07:00 |
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latex2html
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ldl
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libghemical
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link-grammar
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locarna
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lpsolve
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mafft
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academic/mafft: Updated for version 7.505.
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2022-09-08 08:11:03 +01:00 |
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magic
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mathics
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academic/mathics: Fix deps.
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2022-11-12 22:33:12 +07:00 |
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mathjax2
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mathomatic
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matio
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academic/matio: Updated for version 1.5.23.
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2023-02-11 09:30:46 +07:00 |
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maxima
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academic/maxima: Updated for version 5.46.0.
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2022-10-08 09:12:41 +07:00 |
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meep
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megax
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meme-db-gomo
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meme-db-motif
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meme-db-tgene
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meme-suite
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mendeleydesktop
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metalwalls
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academic/metalwalls: Added (Molecular modelling systems).
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2022-10-19 01:02:36 +07:00 |
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MetaPhlAn2
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academic/MetaPhlAn2: Fix ARCH and deps.
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2022-11-12 22:33:20 +07:00 |
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metis
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mfem
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academic/mfem: Added (library for finite element methods).
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2022-11-20 09:37:41 +07:00 |
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minorminer
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academic/minorminer: Added (heuristic tool for minor embedding).
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2022-11-12 10:48:01 +07:00 |
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mkDSSP
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molequeue
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mpb
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mrbayes
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mumsa
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academic/mumsa: Added (A tool to assess MSA quality)
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2022-09-25 13:59:42 +07:00 |
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muscle
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muscle5
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academic/muscle5: Added (MUSCLE 5: Next-generation MUSCLE)
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2022-10-15 10:47:28 +07:00 |
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ncbi-blast
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ncbi-blast+
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ncbi-rmblastn
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nco
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academic/nco: Updated for version 5.1.4.
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2023-01-14 08:50:01 +07:00 |
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ncview
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ngspice
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academic/ngspice: Updated for version 38.
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2022-11-05 21:15:04 +07:00 |
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novocraft
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NWChem
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academic/NWChem: Added (High-Performance Computational Chemistry)
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2022-12-10 07:43:12 +07:00 |
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octave
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academic/octave: Updated for version 7.3.0
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2022-11-12 22:33:22 +07:00 |
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openboard
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academic/openboard: Fix build with newer ffmpeg.
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2022-10-13 10:19:15 +07:00 |
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OpenFOAM
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OpenMM
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academic/OpenMM: Fix github tarball handling.
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2022-11-05 21:15:16 +07:00 |
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OpenVSP
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academic/OpenVSP: Moved from graphics. Updated for version 3.31.1.
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2023-01-21 10:22:03 +07:00 |
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pal2nal
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paml
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academic/paml: Remove stray symlink.
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2022-10-20 23:32:13 +07:00 |
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pamlX
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academic/pamlX: Rebuild for paml update.
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2022-10-15 10:47:28 +07:00 |
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papi
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pari
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parmetis
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patsy
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academic/patsy: Fix deps.
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2022-11-12 22:33:12 +07:00 |
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pcalc
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pcb
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penaltymodel
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academic/penaltymodel: Added (penalty model solver).
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2022-11-12 10:49:57 +07:00 |
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perlprimer
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petsc
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academic/petsc: Fix deps.
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2022-11-12 22:33:16 +07:00 |
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PhyML
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pianobooster
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plasmidomics
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plus42
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academic/plus42: Updated for version 1.0.15.
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2023-01-14 08:50:07 +07:00 |
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prank-msa
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academic/prank-msa: Added (probabilistic multiple alignment program)
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2022-09-08 22:18:25 +01:00 |
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primer3
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pspp
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pulseview
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PyAMG
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academic/PyAMG: Fix deps.
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2022-11-12 22:33:11 +07:00 |
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pyCRAC
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academic/pyCRAC: Fix deps.
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2022-11-12 22:33:16 +07:00 |
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pyfits
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academic/pyfits: Fix deps.
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2022-11-12 22:33:13 +07:00 |
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pysam
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academic/pysam: upgraded to version 0.20.0
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2022-11-24 22:15:19 +07:00 |
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python2-kiwisolver
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academic/python2-kiwisolver: Added (Cassowary algorithm)
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2022-11-05 21:15:10 +07:00 |
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python2-scipy
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academic/python2-scipy: Added (math, science, & engineering py2 lib)
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2022-11-05 21:15:09 +07:00 |
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python3-ase
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academic/python3-ase: Added (Atomic Simulation Environment (ASE))
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2022-12-10 07:43:12 +07:00 |
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python3-scipy
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academic/python3-scipy: Added (py3 math, science, and engineering)
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2022-11-05 21:15:10 +07:00 |
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qalculate-gtk
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qcl
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qhull
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qrupdate
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qucs
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R
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academic/R: Updated for version 4.2.2.
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2022-11-12 22:33:08 +07:00 |
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ramulator
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academic/ramulator: Fix github tarball handling.
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2022-11-26 09:11:46 +07:00 |
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RAxML
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rbio
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reduce-algebra
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RepeatMasker
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root
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academic/root: Fix permissions on README and subdirs
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2022-11-20 08:51:29 +07:00 |
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rpy2
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academic/rpy2: upgraded to version 3.5.6
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2022-11-24 22:14:51 +07:00 |
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sage
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sage-bin
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samtools
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academic/samtools: Ugrade to version 1.16.1
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2022-10-15 09:25:55 +07:00 |
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samtools-legacy
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scidavis
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scilab
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seaview
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academic/seaview: Updated for version 5.0.5.
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2022-09-04 14:49:33 +01:00 |
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seqkit
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SeqMonk
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sequence-analysis
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Shark
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sigrok-cli
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SimEng
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academic/SimEng: Fix github tarball handling.
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2022-11-26 09:11:46 +07:00 |
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siril
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smath-studio
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academic/smath-studio: Updated for version 1.0.8348
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2022-12-03 11:46:53 +07:00 |
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snpEff
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solfege
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spades
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speedcrunch
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spiceopus
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spidey
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spqr
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squizz
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staden
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STAR
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academic/STAR: ugraded to version 2.7.10b
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2022-11-24 22:14:26 +07:00 |
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stellarium
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stellarsolver
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stringtie
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SU2
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suitesparse
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suitesparseconfig
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sundials
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sword
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sword-data-kjv
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t_coffee
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tabix-legacy
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tiemu
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tilem
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tilem2
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tkgate
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topdraw
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tophat
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treebest-ensembl
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TreeGraph
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treeviewx
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trfind
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trimmomatic
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tuxmath
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tuxtype2
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ucsc-blat
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ugene
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academic/ugene: Updated for version 44.0.
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2022-09-08 08:11:03 +01:00 |
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umfpack
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units
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academic/units: Updated for version 2.22
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2022-09-10 15:19:08 +07:00 |
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vCAPS_coevolution
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academic/vCAPS_coevolution: Added (Coevolution Analysis)
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2022-09-09 03:10:09 +01:00 |
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vcftools
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verilator
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verilog
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academic/verilog: Fix download url.
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2022-11-05 12:56:05 +07:00 |
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veusz
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academic/veusz: Fix deps.
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2022-11-12 22:33:18 +07:00 |
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ViennaRNA
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voro++
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academic/voro++: Added (A 3D Voronoi cell software library)
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2022-10-15 10:47:38 +07:00 |
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wehi-cellsymphony
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wehi-deid
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wehi-hackit
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wehi-weasel
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WEVOTE
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wmcalc
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academic/wmcalc: Fix doinst.sh.
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2022-12-31 09:14:48 +07:00 |
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WolframEngine
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academic/WolframEngine: Added (Wolfram Language Engine)
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2023-01-07 08:13:37 +07:00 |
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WordNet
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wxMaxima
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x48
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xcircuit
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xephem
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xflr5
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xfoil
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xiphos
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xoscope
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xsimd
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academic/xsimd: Updated for version 10.0.0.
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2022-12-03 09:09:23 +07:00 |
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yices2
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academic/yices2: Added (Satisfiability modulo theories solver).
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2022-11-05 12:46:15 +07:00 |
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z3
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academic/z3: Updated for version 4.11.2.
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2022-10-08 09:12:54 +07:00 |
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ZeGrapher
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zotero
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academic/zotero: Updated for version 6.0.20.
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2023-01-21 10:21:57 +07:00 |
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