mirror of
https://github.com/Ponce/slackbuilds
synced 2024-11-21 19:42:24 +01:00
15 lines
613 B
Text
15 lines
613 B
Text
Spidey: an mRNA-to-genomic alignment program.
|
|
|
|
Spidey is a tool for aligning one or more mRNA sequences to a given
|
|
genomic sequence. It was written with two main goals in mind:
|
|
1) find good alignments regardless of intron size
|
|
2) avoid getting confused by nearby pseudogenes and paralogs.
|
|
|
|
The following programs provide a GUI to run spidey:
|
|
-ugene
|
|
-perlprimer
|
|
|
|
This is just repackaging of precompiled binaries:
|
|
- x86 platform: the executable is provided by upstream (NCBI).
|
|
- x86_64 platform: the executable is kindly provided by the UniPro
|
|
Ugene project, where it is part of their External Tools meta-package.
|