2015-02-04 13:55:11 +01:00
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Spidey: an mRNA-to-genomic alignment program.
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2011-09-04 13:29:49 +02:00
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2015-02-04 13:55:11 +01:00
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Spidey is a tool for aligning one or more mRNA sequences to a given
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genomic sequence. It was written with two main goals in mind:
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1) find good alignments regardless of intron size
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2) avoid getting confused by nearby pseudogenes and paralogs.
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The following programs provide a GUI to run spidey:
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-ugene
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-perlprimer
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This is just repackaging of precompiled binaries:
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- x86 platform: the executable is provided by upstream (NCBI).
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- x86_64 platform: the executable is kindly provided by the UniPro
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Ugene project, where it is part of their External Tools meta-package.
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