mirror of
https://github.com/Ponce/slackbuilds
synced 2024-11-24 10:02:29 +01:00
20 lines
806 B
Text
20 lines
806 B
Text
Aline: An Extensible WYSIWYG Protein Sequence Alignment Editor for
|
|
Publication Quality Figures.
|
|
|
|
Aline is an interactive perl/tk application which can read common
|
|
sequence alignment formats which the user can then alter, embellish,
|
|
markup etc to produce the kind of sequence figure commonly found in
|
|
biochemical articles.
|
|
|
|
NOTE
|
|
The default row length is 100 residues. If you want to change that to
|
|
something else (e.g. 1000) pass ROW=1000 to the script.
|
|
|
|
OPTIONAL
|
|
Although not needed for running Aline, clustalw and mkDSSP are
|
|
desirable for its complete functionality. A third tool is CHAINSAW,
|
|
part of the CCP4 suite (http://www.ccp4.ac.uk/). Visit the web site
|
|
for more information and installation instructions if you want it.
|
|
|
|
CITING
|
|
Bond, C.S. and Schuttelkopf, A.W. (2009), Acta cryst. D65, 510-512
|