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676 commits

Author SHA1 Message Date
Petar Petrov
db4f9186fc academic/ncbi-blast: Added (Basic Local Alignment Search Tool). 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2013-01-20 09:03:03 -05:00
Petar Petrov
906fb4874d academic/mrbayes: Added (Bayesian Inference of Phylogeny). 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2013-01-20 09:03:02 -05:00
Petar Petrov
191857cec7 academic/mafft: Added (multiple sequence alignment program). 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2013-01-20 09:03:02 -05:00
Petar Petrov
1aa1d7bb19 academic/cap3: Added (DNA sequence assembly program). 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2013-01-20 09:03:02 -05:00
Petar Petrov
ab46533b59 academic/bwa: Added (Burrows-Wheeler Aligner). 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2013-01-20 09:03:02 -05:00
Petar Petrov
687759e7cd academic/bowtie: Added (short read aligner of DNA sequences). 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2013-01-20 09:03:02 -05:00
Pablo Santamaria
7e272c48ff academic/suitesparse: Updated for version 4.0.2. 
Simplified build, added notes to the README, cleanups

Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2013-01-09 18:52:20 -05:00
Pablo Santamaria
c0a2a74cc9 academic/qrupdate: Updated for version 1.1.2. 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2013-01-09 18:52:20 -05:00
B. Watson
76455e1e89 academic/pianobooster: License added. 
Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
 2013-01-01 20:32:08 -05:00
Benjamin Trigona-Harany
28802da381 academic/mapnik: Added (map-rendering toolkit) 
Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
 2013-01-01 00:39:16 -05:00
B. Watson
8eb6b2ccfe academic/ent: License added. 
Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
 2013-01-01 00:31:45 -05:00
Alexander Bruy
9ef5b37210 academic/TauDEM: Added (Terrain Analysis Using DEM) 
Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
 2012-12-29 22:25:34 -05:00
Kyle Guinn
9bd0400923 academic/octave: Added a license and clarified some comments. 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2012-12-23 23:13:20 +01:00
Giorgio Peron
18366462c6 academic/ktikz: Added (LaTeX tikz editor) 
Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
 2012-12-23 09:16:12 -05:00
Glenn Becker
8b40df8e2b academic/maxima: Updated for version 5.28.0. 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2012-12-21 21:27:26 +01:00
John Berger
7a409f90b2 academic/convertall: Fixed maintainer email. 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2012-12-21 21:27:24 +01:00
Benjamin Trigona-Harany
ff4423db17 academic/udig: Added (desktop GIS). 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2012-12-20 17:30:27 +01:00
Daniil Bratashov
e1937f6d31 academic/gwyddion: Updated for version 2.30, added license. 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2012-12-20 16:37:28 +01:00
Alexander Bruy
7d7f9ecaf3 academic/spatialite-tools: Added (SpatiaLite CLI utils). 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2012-12-20 16:25:06 +01:00
Larry Hajali
c70a74311f academic/wxMaxima: Updated for version 12.09.0, cleanups. 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2012-12-19 20:38:48 +01:00
Larry Hajali
f0a2380b1c academic/avogadro: Updated for version 1.1.0. 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2012-12-19 19:54:17 +01:00
Jože Zobec
d09d9f85a0 academic/root: Added (data analysis framework). 
(changed PREFIX from /usr to /usr/ROOT -with profile.d scripts
and ld.so.conf- moved python stuff, use system libs  --ponce)

Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2012-12-18 00:23:15 +01:00
JK Wood
178d0c060c academic/tilem: Noted incompat. with libticables2, modified license. 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2012-12-16 22:31:01 +01:00
Petar Petrov
0b841ae33a academic/seaview: Updated for version 4.4.0. 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2012-12-15 15:13:38 +01:00
Petar Petrov
486b19495c academic/gchemutils: Updated for version 0.12.13. 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2012-12-15 15:13:37 +01:00
Erwin van Zanten
5f9b716ecf academic/gresistor: Added (resistor color code calculator). 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2012-12-15 15:13:34 +01:00
Mikhail Zotov
e76f0e24e0 academic/artha: Updated for version 1.0.3. 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2012-12-14 17:31:30 +01:00
Matthew Fillpot
3282d5fe01 academic/mathomatic: Updated for version 16.0.5. 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2012-12-12 12:56:48 +01:00
John Berger
fba8e23ade academic/convertall: Added (unit conversion tool). 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2012-12-11 16:23:07 -05:00
Fridrich von Stauffenberg
f10577d2b0 academic/scilab: Updated for version 5.4.0, cleanups. 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2012-12-11 16:23:06 -05:00
Dario Nicodemi
68444207e2 academic/xephem: Fixed wrong version in .info file 
Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
 2012-12-11 16:21:47 -05:00
Heinz Wiesinger
208edeb497 academic/kile: Updated for version 2.1.3 
Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
 2012-12-11 16:21:47 -05:00
melikamp
5d684fe2bf academic/R: Updated for version 2.15.2 
Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
 2012-12-11 16:21:47 -05:00
Glenn Becker
74dc316c26 academic/maxima: Updated for version 5.27.0. 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2012-11-04 09:53:55 -05:00
Matteo Bernardini
6fee3f0094 academic/smath-studio: Updated for version 0.95.4594. 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2012-11-04 09:53:44 -05:00
dsomero
05aee03c4d Files on server need to be mode 644. 
Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
 2012-10-02 17:03:34 -04:00
Heinz Wiesinger
933912fdc1 academic/kile: New maintainer. 
Signed-off-by: Heinz Wiesinger <pprkut@slackbuilds.org>
 2012-10-02 11:19:33 -05:00
dsomero
731249d0d8 academic/wxmacmolplt: Fixed (install doinst.sh file) 
Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
 2012-09-29 17:17:36 -05:00
dsomero
af2bf18e68 academic/speedcrunch: Fixed (Handle desktop files) 
Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
 2012-09-29 17:17:36 -05:00
dsomero
d8fdcb7386 academic/qtoctave: Fixed (Handle icon files) 
Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
 2012-09-29 17:17:36 -05:00
dsomero
e5651cee0f academic/kile: Fixed (Handle mime info) 
Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
 2012-09-29 17:17:36 -05:00
dsomero
adf2c7c2ca academic/gtkwave: Fixed (Handle mime info and desktop files) 
Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
 2012-09-29 17:17:35 -05:00
dsomero
856a223d7c academic/geda-gaf: Fixed (Don't clobber Slackware's mime info) 
Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
 2012-09-29 17:17:35 -05:00
dsomero
466ae5343b academic/gcompris: Fixed (handle man and info files) 
Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
 2012-09-29 17:17:35 -05:00
dsomero
f37bbbc550 academic/gchemutils: Fixed (handle gconf schema) 
Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
 2012-09-29 17:17:35 -05:00
Kyle Guinn
d5057e019c academic/octave: Revert deletion of configure.ac fixes 
These are still needed to find SuiteSparse dependencies.

Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
 2012-09-22 11:40:56 -05:00
Petar Petrov
0edc3b2d37 academic/QtiPlot: Removed unused png file 
It uses qtiplot_logo.png from the sources as the icon.

Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
 2012-09-22 11:40:54 -05:00
Matteo Bernardini
5b07a7aa70 academic/itex2mml: Updated for version 1.4.10. 
Fixed also ruby detection and cleanups.

Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2012-09-18 19:33:39 -05:00
Matteo Bernardini
71b64e2e49 academic/gtkwave: Updated for version 3.3.40. 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2012-09-18 19:33:37 -05:00
willysr
af4613b39d academic/sage: Updated for version 5.3. 
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
 2012-09-18 17:40:04 -05:00
Willy Sudiarto Raharjo
94a0d23a35 academic/free42: Fix linking with X11. 
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
 2012-09-17 23:36:14 -05:00
Robby Workman
1017a0828c academic/EMBOSS: Deleted unnecessary/unused patch file 
Thanks to Petar Petrov.

Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
 2012-09-17 23:36:12 -05:00
Robby Workman
5d37f420ad academic/octave-forge: Removed (unmaintained upstream) 
From: Binh Nguyen <bnguyen@gmx.com>
Subject: Re: [Slackbuilds-users] Orphaned packages
Date: Mon, 17 Sep 2012 16:37:09 +0700

This bundle package currently not completely build on -current and is
listed on Checklist.txt. The last version was released a few years ago
and now becomes very obsolete.

Since upstream does not release bundle anymore, unless somebody
interested in this steps up and do something about it, it should be
removed. Individual extras can be installed from the Octave prompt.

Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
 2012-09-17 23:36:12 -05:00
Binh Nguyen
310fe6c9ca academic/octave: Updated for version 3.6.3. 
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
 2012-09-16 21:52:49 -05:00
Willy Sudiarto Raharjo
175325edf4 academic/pianobooster: Fix build (remove unneeded flag) 
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
 2012-09-16 19:45:34 -04:00
Willy Sudiarto Raharjo
1fb3922c8c academic/gcompris: Updated for version 12.05. 
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
 2012-09-16 19:45:34 -04:00
Matteo Bernardini
760e87b8f6 academic/GMT: Updated for version 4.5.8 
Added the optional dependency gdal.

Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2012-09-14 21:37:03 +02:00
Serban Udrea
3281b7504f academic/sympy: Noted some compat issues in README 
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
 2012-09-13 21:39:49 -05:00
Serban Udrea
f91e45e836 academic/scipy: Updated for version 0.10.1. 
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
 2012-09-13 21:39:49 -05:00
Binh Nguyen
38fcc59eab Several: Change my email to @gmail.com in all maintained scripts 2012-09-13 17:59:48 -05:00
Matteo Bernardini
5e4bf88eb6 academic/qucs: Changed download link ("connection refused"). 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2012-09-13 17:56:49 -05:00
Matteo Bernardini
c0bfa33f47 academic/engauge: Added a patch for gcc-4.7.x. 
Also changed download link

Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2012-09-13 17:56:49 -05:00
Binh Nguyen
65b109e209 academic/galculator: Fixed underlinking. 
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
 2012-09-12 21:05:18 -05:00
Petar Petrov
b1737613da academic/primer3: Updated for version 2.3.4. 
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
 2012-09-12 14:20:45 -05:00
Petar Petrov
9855d21463 academic/EMBOSS: Updated for version 6.5.7. 
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
 2012-09-12 14:20:44 -05:00
Petar Petrov
9248037d31 acacemic/EMBASSY: Updated for version 6.5.7. 
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
 2012-09-12 14:20:44 -05:00
Petar Petrov
3fe1a37bd2 academic/sequence-analysis: Fixed desktop file (removed quotes) 
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
 2012-09-12 14:20:44 -05:00
Heinz Wiesinger
63de6753a2 academic/celestia: Added patch for gcc 4.7. 
Signed-off-by: Heinz Wiesinger <pprkut@slackbuilds.org>
 2012-09-12 14:19:24 -05:00
Petar Petrov
5457d31725 academic/gchemutils: Fixed build. 
Signed-off-by: Erik Hanson <erik@slackbuilds.org>
 2012-09-11 23:55:42 -05:00
Petar Petrov
dea576fec3 academic/staden: Build fixes for Slackware 14.0 
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
 2012-09-11 23:53:42 -05:00
Petar Petrov
4be8b0406f academic/QtiPlot: Build fixes and enhancements 
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
 2012-09-11 23:53:42 -05:00
dsomero
3b97639e30 academic/sequence-analysis: Add jdk to REQUIRES. 
This was based off the package containing a .jar file. 

Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
 2012-09-10 20:09:22 -04:00
dsomero
232e563bf6 academic/scilab: Add jdk to REQUIRES. 
This was based off the package containing a .jar file. 

Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
 2012-09-10 20:09:22 -04:00
dsomero
f7b6abeead academic/jpicedt: Add jdk to REQUIRES. 
This was based off the package containing a .jar file. 

Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
 2012-09-10 20:09:18 -04:00
dsomero
29e9b2b9b6 academic/ImageJ: Add jdk to REQUIRES. 
This was based off the package containing a .jar file. 

Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
 2012-09-10 20:09:13 -04:00
dsomero
7b906247fe academic/EMBOSS: Add jdk to REQUIRES. 
This was based off the package containing a .jar file. 

Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
 2012-09-10 20:09:13 -04:00
dsomero
f6e4560357 academic/EMBOSS: Fixed download link. 
Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
 2012-09-08 17:25:28 -05:00
dsomero
71e74a3078 academic/EMBASSY: Fixed download links. 
Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
 2012-09-08 17:25:23 -05:00
dsomero
cff2f8f628 academic/gelemental: Patched for glib 2.32+. 
Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
 2012-09-06 21:42:28 -05:00
dsomero
f048c42e96 academic/geda-gaf: Updated for version 1.6.2 
Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
 2012-09-06 17:13:43 -05:00
dsomero
6a911c17ec academic/sword: Patched to build on Slackware 14.0. 
Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
 2012-09-05 20:14:41 -05:00
dsomero
403c023c6a academic/bibletime: Updated for version 2.9.1. 
Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
 2012-09-05 20:14:41 -05:00
Niels Horn
b280c97d09 *: newest dep-fixes 
Signed-off-by: Niels Horn <niels.horn@slackbuilds.org>
 2012-09-01 18:38:43 +02:00
Robby Workman
aedfe6f14a academic/chemtool: Updated for version 1.6.13. 
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
 2012-08-27 22:37:38 -05:00
Robby Workman
97d1ea4fc6 academic/calcoo: Updated for version 1.3.18. 
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
 2012-08-27 22:32:20 -05:00
Heinz Wiesinger
fe607e8da2 whole repo: utf8 encoding fixes for maintainer names 
Signed-off-by: Heinz Wiesinger <pprkut@slackbuilds.org>
 2012-08-26 18:43:10 -05:00
ponce
59fe78861a academic/link-grammar: Fixed dep information 2012-08-25 13:29:06 +02:00
Robby Workman
9fd4da21da academic/wxmacmolplt: Fixed dep information 
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
 2012-08-22 16:07:19 -05:00
Robby Workman
9ba78d5c9c academic/wxMaxima: Fixed dep information 
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
 2012-08-22 16:07:19 -05:00
Robby Workman
4f442e042c academic/tuxtype2: Fixed dep information 
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
 2012-08-22 16:07:18 -05:00
Robby Workman
32497d684f academic/tuxmath: Fixed dep information 
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
 2012-08-22 16:07:18 -05:00
Robby Workman
ee6387c7f6 academic/treeview: Fixed dep information 
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
 2012-08-22 16:07:18 -05:00
Robby Workman
090fe80fbd academic/sympy: Fixed dep information 
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
 2012-08-22 16:07:18 -05:00
Robby Workman
1a7889488d academic/suitesparse: Fixed dep information 
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
 2012-08-22 16:07:18 -05:00
Robby Workman
2099809cbf academic/staden: Fixed dep information 
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
 2012-08-22 16:07:18 -05:00
Robby Workman
416e6db1c1 academic/solfege: Fixed dep information 
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
 2012-08-22 16:07:18 -05:00
Robby Workman
02d3d46c84 academic/smath-studio: Fixed dep information 
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
 2012-08-22 16:07:17 -05:00
Robby Workman
22c657adcf academic/seaview: Fixed dep information 
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
 2012-08-22 16:07:17 -05:00
Robby Workman
0fd135ef7d academic/scipy: Fixed dep information 
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
 2012-08-22 16:07:17 -05:00
Robby Workman
9608854d68 academic/qucs: Fixed dep information 
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
 2012-08-22 16:07:17 -05:00