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https://github.com/Ponce/slackbuilds
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academic/suitesparse: Updated for version 4.0.2.
Simplified build, added notes to the README, cleanups Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
This commit is contained in:
Pablo Santamaria
dsomero
parent
c0a2a74cc9
commit
7e272c48ff
4 changed files with 43 additions and 249 deletions
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@ -1,31 +1,36 @@
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suitesparse is a collection of libraries for computations involving sparse
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matrices. The package includes the following libraries:
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AMD approximate minimum degree ordering
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BTF permutation to block triangular form (beta)
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CAMD constrained approximate minimum degree ordering
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COLAMD column approximate minimum degree ordering
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CCOLAMD constrained column approximate minimum degree ordering
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CHOLMOD sparse Cholesky factorization
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CXSparse CSparse extended: complex matrix, int and long int support
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KLU sparse LU factorization, primarily for circuit simulation
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LDL a simple LDL' factorization
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SQPR a multithread, multifrontal, rank-revealing sparse QR
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factorization method
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UMFPACK sparse LU factorization
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UFconfig configuration file for all the above packages.
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AMD: approximate minimum degree ordering.
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BTF: permutation to block triangular form (beta).
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CAMD: constrained approximate minimum degree ordering.
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COLAMD: column approximate minimum degree ordering.
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CCOLAMD: constrained column approximate minimum degree ordering.
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CHOLMOD: sparse Cholesky factorization.
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CXSparse: CSparse extended: complex matrix, int and long int support.
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KLU: sparse LU factorization, primarily for circuit simulation.
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LDL: a simple LDL^t factorization.
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SQPR: a multithread, multifrontal, rank-revealing sparse QR factorization method.
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UMFPACK: sparse LU factorization.
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SuiteSparse_config: configuration file for all the above packages.
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RBio: read/write files in Rutherford/Boeing format.
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suitesparse is an optional dependency for the octave package.
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Suitesparse is an optional dependency for the octave package.
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NOTES:
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* To build octave with SuiteSparse 4.x you'll need to add a second library
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to the octave's configure option --with-umfpack:
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--with-umfpack="-lumfpack -lsuitesparseconfig"
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* CHOLMOD can also be compiled to use the METIS library, but it is not
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used here because its licensing terms exclude it from Octave.
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used here because its licensing terms exclude it from Octave.
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* CXSparse is a superset of CSparse, and the two share common header
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names, so it does not make sense to build both. CXSparse is built
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by default.
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names, so it does not make sense to build both. CXSparse is built
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by default.
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* SlackBuilds.org also has all the parts of this suite as individual
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builds - DO NOT try and install the individual parts and the suite;
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pick one or the other.
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builds - DO NOT try and install the individual parts and the suite;
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pick one or the other.
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@ -10,8 +10,8 @@ suitesparse: suitesparse (A collection of sparse matrix libraries)
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suitesparse:
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suitesparse: suitesparse is a collection of libraries for computations involving
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suitesparse: sparse matrices. The package includes the following libraries:
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suitesparse: AMD, BTF, CAMD, COLAMD, CCOLAMD, CHOLMOD, CSparse, CXSparse, KLU,
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suitesparse: LDL, SQPR, UMFPACK.
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suitesparse: AMD, BTF, CAMD, COLAMD, CCOLAMD, CHOLMOD, CXSparse, KLU, LDL,
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suitesparse: SQPR, UMFPACK.
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suitesparse:
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suitesparse:
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suitesparse:
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@ -5,7 +5,7 @@
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# Written by Pablo Santamaria (pablosantamaria@gmail.com)
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PRGNAM=suitesparse
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VERSION=${VERSION:-3.4.0}
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VERSION=${VERSION:-4.0.2}
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BUILD=${BUILD:-1}
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TAG=${TAG:-_SBo}
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@ -38,31 +38,6 @@ else
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LIBDIRSUFFIX=""
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fi
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amd_version=2.2.0
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amd_version_major=2
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btf_version=1.1.0
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btf_version_major=1
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camd_version=2.2.0
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camd_version_major=2
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ccolamd_version=2.7.1
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ccolamd_version_major=2
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cholmod_version=1.7.1
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cholmod_version_major=1
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colamd_version=2.7.1
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colamd_version_major=2
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csparse_version=2.2.3
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csparse_version_major=2
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cxsparse_version=2.2.3
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cxsparse_version_major=2
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klu_version=1.1.0
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klu_version_major=1
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ldl_version=2.0.1
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ldl_version_major=2
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umfpack_version=5.4.0
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umfpack_version_major=5
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spqr_version=1.1.2
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spqr_version_major=1
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set -e
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rm -rf $PKG
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@ -79,209 +54,23 @@ find . \
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\( -perm 666 -o -perm 664 -o -perm 600 -o -perm 444 -o -perm 440 -o -perm 400 \) \
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-exec chmod 644 {} \;
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# Set common configuration for the SuiteSparse
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cp $CWD/UFconfig.mk UFconfig
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for lib in SuiteSparse_config AMD CAMD COLAMD BTF KLU LDL CCOLAMD UMFPACK CHOLMOD CXSparse SPQR RBio; do
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make -C $lib library CFLAGS="$SLKCFLAGS -DNPARTITION"
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done
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mkdir -p Doc/{AMD,BTF,CAMD,CCOLAMD,CHOLMOD,COLAMD,KLU,LDL,UMFPACK,SPQR} Lib Include
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pushd AMD
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pushd Lib
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make CFLAGS="$SLKCFLAGS -fPIC"
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popd
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pushd ../Lib
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gcc -shared -Wl,-soname,libamd.so.${amd_version_major} -o \
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libamd.so.${amd_version} ../AMD/Lib/*.o -lm
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ln -sf libamd.so.${amd_version} libamd.so.${amd_version_major}
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ln -sf libamd.so.${amd_version} libamd.so
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cp -p ../AMD/Lib/*.a ./
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popd
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cp -p Include/*.h ../Include
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cp -p README.txt Doc/License Doc/ChangeLog Doc/*.pdf ../Doc/AMD
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popd
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pushd BTF
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pushd Lib
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make CFLAGS="$SLKCFLAGS -fPIC"
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popd
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pushd ../Lib
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gcc -shared -Wl,-soname,libbtf.so.${btf_version_major} -o \
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libbtf.so.${btf_version} ../BTF/Lib/*.o
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ln -sf libbtf.so.${btf_version} libbtf.so.${btf_version_major}
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ln -sf libbtf.so.${btf_version} libbtf.so
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cp -p ../BTF/Lib/*.a ./
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popd
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cp -p Include/*.h ../Include
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cp -p README.txt Doc/* ../Doc/BTF
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popd
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pushd CAMD
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pushd Lib
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make CFLAGS="$SLKCFLAGS -fPIC"
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popd
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pushd ../Lib
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gcc -shared -Wl,-soname,libcamd.so.${camd_version_major} -o \
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libcamd.so.${camd_version} ../CAMD/Lib/*.o -lm
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ln -sf libcamd.so.${camd_version} libcamd.so.${camd_version_major}
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ln -sf libcamd.so.${camd_version} libcamd.so
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cp -p ../CAMD/Lib/*.a ./
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popd
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cp -p Include/*.h ../Include
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cp -p README.txt Doc/ChangeLog Doc/License Doc/*.pdf ../Doc/CAMD
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popd
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pushd CCOLAMD
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pushd Lib
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make CFLAGS="$SLKCFLAGS -fPIC"
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popd
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pushd ../Lib
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gcc -shared -Wl,-soname,libccolamd.so.${ccolamd_version_major} -o \
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libccolamd.so.${ccolamd_version} ../CCOLAMD/Lib/*.o -lm
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ln -sf libccolamd.so.${ccolamd_version} libccolamd.so.${ccolamd_version_major}
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ln -sf libccolamd.so.${ccolamd_version} libccolamd.so
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cp -p ../CCOLAMD/Lib/*.a ./
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popd
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cp -p Include/*.h ../Include
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cp -p README.txt Doc/* ../Doc/CCOLAMD
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popd
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pushd COLAMD
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pushd Lib
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make CFLAGS="$SLKCFLAGS -fPIC"
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popd
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pushd ../Lib
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gcc -shared -Wl,-soname,libcolamd.so.${colamd_version_major} -o \
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libcolamd.so.${colamd_version} ../COLAMD/Lib/*.o -lm
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ln -sf libcolamd.so.${colamd_version} libcolamd.so.${colamd_version_major}
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ln -sf libcolamd.so.${colamd_version} libcolamd.so
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cp -p ../COLAMD/Lib/*.a ./
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popd
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cp -p Include/*.h ../Include
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cp -p README.txt Doc/* ../Doc/COLAMD
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popd
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# CHOLMOD can also be compiled to use the METIS library, but it is not
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# used here because its licensing terms exclude it from Octave.
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pushd CHOLMOD
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pushd Lib
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make CFLAGS="$SLKCFLAGS -fPIC"
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popd
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pushd ../Lib
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gcc -shared -Wl,-soname,libcholmod.so.${cholmod_version_major} -o \
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libcholmod.so.${cholmod_version} ../CHOLMOD/Lib/*.o \
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-lblas -lgfortran -lgfortranbegin -llapack \
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libamd.so.${amd_version_major} \
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libcamd.so.${camd_version_major} libcolamd.so.${colamd_version_major} \
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libccolamd.so.${ccolamd_version_major} -lm
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ln -sf libcholmod.so.${cholmod_version} libcholmod.so.${cholmod_version_major}
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ln -sf libcholmod.so.${cholmod_version} libcholmod.so
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cp -p ../CHOLMOD/Lib/*.a ./
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popd
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cp -p Include/*.h ../Include
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cp -p README.txt Doc/*.pdf ../Doc/CHOLMOD
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cp -p Cholesky/License.txt ../Doc/CHOLMOD/Cholesky_License.txt
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cp -p Core/License.txt ../Doc/CHOLMOD/Core_License.txt
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cp -p MatrixOps/License.txt ../Doc/CHOLMOD/MatrixOps_License.txt
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cp -p Partition/License.txt ../Doc/CHOLMOD/Partition_License.txt
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cp -p Supernodal/License.txt ../Doc/CHOLMOD/Supernodal_License.txt
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popd
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# CXSparse is a superset of CSparse, and the two share common header
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# names, so it does not make sense to build both.
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pushd CXSparse
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pushd Lib
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make CFLAGS="$SLKCFLAGS -fPIC"
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popd
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pushd ../Lib
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gcc -shared -Wl,-soname,libcxsparse.so.${cxsparse_version_major} -o \
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libcxsparse.so.${cxsparse_version} ../CXSparse/Lib/*.o -lm
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ln -sf libcxsparse.so.${cxsparse_version} libcxsparse.so.${cxsparse_version_major}
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ln -sf libcxsparse.so.${cxsparse_version} libcxsparse.so
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cp -p ../CXSparse/Lib/*.a ./
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popd
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cp -p Include/cs.h ../Include
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mkdir ../Doc/CXSparse/
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cp -p Doc/* ../Doc/CXSparse
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popd
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pushd KLU
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pushd Lib
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make CFLAGS="$SLKCFLAGS -fPIC"
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popd
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pushd ../Lib
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gcc -shared -Wl,-soname,libklu.so.${klu_version_major} -o \
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libklu.so.${klu_version} ../KLU/Lib/*.o \
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libamd.so.${amd_version_major} libcolamd.so.${colamd_version_major} \
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libbtf.so.${btf_version_major} libcholmod.so.${cholmod_version_major}
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ln -sf libklu.so.${klu_version} libklu.so.${klu_version_major}
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ln -sf libklu.so.${klu_version} libklu.so
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cp -p ../KLU/Lib/*.a ./
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popd
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cp -p Include/*.h ../Include
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cp -p README.txt Doc/lesser.txt ../Doc/KLU
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popd
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pushd LDL
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pushd Lib
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make CFLAGS="$SLKCFLAGS -fPIC"
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popd
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pushd ../Lib
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gcc -shared -Wl,-soname,libldl.so.${ldl_version_major} -o \
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libldl.so.${ldl_version} ../LDL/Lib/*.o
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ln -sf libldl.so.${ldl_version} libldl.so.${ldl_version_major}
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ln -sf libldl.so.${ldl_version} libldl.so
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cp -p ../LDL/Lib/*.a ./
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popd
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cp -p Include/*.h ../Include
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cp -p README.txt Doc/ChangeLog Doc/lesser.txt Doc/*.pdf ../Doc/LDL
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popd
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pushd UMFPACK
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pushd Lib
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make CFLAGS="$SLKCFLAGS -fPIC"
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popd
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pushd ../Lib
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gcc -shared -Wl,-soname,libumfpack.so.${umfpack_version_major} -o \
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libumfpack.so.${umfpack_version} ../UMFPACK/Lib/*.o \
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-lblas -lgfortran -lgfortranbegin -llapack \
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libamd.so.${amd_version_major} -lm
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ln -sf libumfpack.so.${umfpack_version} libumfpack.so.${umfpack_version_major}
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ln -sf libumfpack.so.${umfpack_version} libumfpack.so
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cp -p ../UMFPACK/Lib/*.a ./
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popd
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cp -p Include/*.h ../Include
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cp -p README.txt Doc/License Doc/ChangeLog Doc/gpl.txt Doc/*.pdf ../Doc/UMFPACK
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popd
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pushd SPQR
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pushd Lib
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make CFLAGS="$SLKCFLAGS -fPIC"
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popd
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pushd ../Lib
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g++ -shared -Wl,-soname,libspqr.so.${spqr_version_major} -o \
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libspqr.so.${spqr_version} ../SPQR/Lib/*.o \
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-lblas -lgfortran -lgfortranbegin -llapack \
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libcholmod.so.${cholmod_version_major} -lm
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ln -sf libspqr.so.${spqr_version} libspqr.so.${spqr_version_major}
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ln -sf libspqr.so.${spqr_version} libspqr.so
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cp -p ../SPQR/Lib/*.a ./
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popd
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cp -p Include/*.h* ../Include
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cp -p README{,_SPQR}.txt
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cp -p README_SPQR.txt Doc/* ../Doc/SPQR
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popd
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cp -p UFconfig/UFconfig.h Include
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mkdir -p $PKG/usr/lib${LIBDIRSUFFIX}
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cp -a Lib/* $PKG/usr/lib${LIBDIRSUFFIX}
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mkdir -p $PKG/usr/lib$LIBDIRSUFFIX
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mkdir -p $PKG/usr/include/suitesparse
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cp -a Include/* $PKG/usr/include/suitesparse
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find $PKG | xargs file | grep -e "executable" -e "shared object" | grep ELF \
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| cut -f 1 -d : | xargs strip --strip-unneeded 2> /dev/null || true
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for lib in SuiteSparse_config AMD CAMD COLAMD BTF KLU LDL CCOLAMD UMFPACK CHOLMOD CXSparse SPQR RBio; do
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make -C $lib INSTALL_LIB="$PKG/usr/lib$LIBDIRSUFFIX" INSTALL_INCLUDE="$PKG/usr/include/suitesparse" install
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done
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mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION
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cp -a README.txt Doc/* $PKG/usr/doc/$PRGNAM-$VERSION
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cp -a README.txt $PKG/usr/doc/$PRGNAM-$VERSION
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for lib in AMD CAMD COLAMD BTF KLU LDL CCOLAMD UMFPACK CHOLMOD CXSparse SPQR RBio; do
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mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION/$lib
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cp -a $lib/Doc/README* $lib/Doc/*.pdf $lib/Doc/ChangeLog $lib/Doc/License* \
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$PKG/usr/doc/$PRGNAM-$VERSION/$lib || true
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done
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cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild
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mkdir -p $PKG/install
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@ -1,8 +1,8 @@
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PRGNAM="suitesparse"
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VERSION="3.4.0"
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VERSION="4.0.2"
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HOMEPAGE="http://www.cise.ufl.edu/research/sparse/SuiteSparse/"
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DOWNLOAD="http://www.cise.ufl.edu/research/sparse/SuiteSparse/SuiteSparse-3.4.0.tar.gz"
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MD5SUM="e59dcabc9173b1ba1b3659ae147006b8"
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DOWNLOAD="http://www.cise.ufl.edu/research/sparse/SuiteSparse/SuiteSparse-4.0.2.tar.gz"
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MD5SUM="efe53b7ef2b529d54727815231a5a6a9"
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DOWNLOAD_x86_64=""
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MD5SUM_x86_64=""
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REQUIRES="lapack"
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