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36792 commits 322 branches 1143 tags 288 MiB
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1332 commits

Author SHA1 Message Date
Petar Petrov
9f7e82c20d
academic/primer3: Updated for version 2.3.7 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2016-06-05 22:28:01 +07:00
Petar Petrov
aa95130ed5
academic/pamlX: Updated against paml 4.9a 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2016-06-05 22:27:59 +07:00
Petar Petrov
e89ebdbb0c
academic/paml: Updated for version 4.9a 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2016-06-05 22:27:59 +07:00
Petar Petrov
a620253841
academic/mafft: Updated for version 7.273 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2016-06-05 22:27:57 +07:00
Petar Petrov
670dfe9ea3
academic/ImageJ: Updated for version 1.50 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2016-06-05 22:27:56 +07:00
Petar Petrov
7f0b78e892
academic/ij-plugins-LOCI: Updated for version 5.1.9 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2016-06-05 22:27:55 +07:00
Petar Petrov
cd371a148f
academic/gchemutils: Updated for version 0.14.12 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2016-06-05 22:27:54 +07:00
Petar Petrov
36c42b77b2
academic/fastqc: Updated for version 0.11.5 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2016-06-05 22:27:54 +07:00
Petar Petrov
5cf72323c4
academic/cutadapt: Updated for version 1.9.1 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2016-06-05 22:27:53 +07:00
Petar Petrov
8e7ce7eb4e
academic/cistrome-mdseqpos: Added (Cistrome mdseqpos) 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2016-06-05 22:27:47 +07:00
Petar Petrov
55129a3e91
academic/cistrome-extra: Added (Cistrome extra apps) 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2016-06-05 22:21:58 +07:00
Petar Petrov
2e35245d33
academic/cistrome-conductGO: Added (find the highest expressed TFs) 2016-06-05 22:21:58 +07:00
Petar Petrov
aad6293dd9
academic/bwa: Updated for version 0.7.13 2016-06-05 22:21:58 +07:00
Petar Petrov
c600a63327
academic/bedGraphToBigWig: Added (Convert bedGraph to bigWig file) 2016-06-05 22:21:58 +07:00
David Spencer
ac819d8485
academic/paml: Fix DOWNLOAD. 
Signed-off-by: David Spencer <baildon.research@googlemail.com>
 2016-06-04 01:20:45 +07:00
David Spencer
8c09318591
academic/squizz: Update MD5SUM. 
Signed-off-by: David Spencer <baildon.research@googlemail.com>
 2016-06-04 01:20:45 +07:00
David Spencer
d528274538
academic/sword-data-kjv: Update MD5SUM. 
Signed-off-by: David Spencer <baildon.research@googlemail.com>
 2016-06-04 01:20:45 +07:00
David Spencer
994c4d19c1
academic/xephem: Updated for version 3.7.7. 
Signed-off-by: David Spencer <baildon.research@googlemail.com>
 2016-06-04 01:20:45 +07:00
David Spencer
debcf063e9
academic/ncbi-blast: Fix DOWNLOAD. 
Signed-off-by: David Spencer <baildon.research@googlemail.com>
 2016-06-04 01:20:45 +07:00
David Spencer
e977ee1431
academic/ktikz: Fix HOMEPAGE and DOWNLOAD. 
Signed-off-by: David Spencer <baildon.research@googlemail.com>
 2016-06-04 01:20:45 +07:00
David Spencer
80c63f4ef8
academic/fet: Fix DOWNLOAD. 
Signed-off-by: David Spencer <baildon.research@googlemail.com>
 2016-06-04 01:20:45 +07:00
David Spencer
8d7bf0297e
academic/armadillo: Updated for version 7.100.3. 
Signed-off-by: David Spencer <baildon.research@googlemail.com>
 2016-06-04 01:20:45 +07:00
David Spencer
c141aa93fe
academic/antiprism: Fix DOWNLOAD. 
Signed-off-by: David Spencer <baildon.research@googlemail.com>
 2016-06-04 01:20:45 +07:00
Matteo Bernardini
d748569cda academic/spades: Fix invalid chars in desc. 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2016-05-27 07:23:29 +07:00
Matteo Bernardini
e9177f9667 academic/mafft: Fix invalid chars in desc. 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2016-05-27 07:23:29 +07:00
Willy Sudiarto Raharjo
2d2e5c3ded academic/R: Updated for version 3.3.0. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2016-05-20 20:03:53 +07:00
Willy Sudiarto Raharjo
a8409be8c2 academic/sage: Updated for version 7.2. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2016-05-20 20:03:53 +07:00
David Spencer
f7308a3f13 academic/root: Updated for version 5.34.36. 
Fixes build failure with gcc-5.3 on i586.
Enabled gsl and fftw by default, since they are both in Slackware.
Moved from /usr/ROOT to /opt/ROOT.
Script cleanups.
 2016-04-19 22:47:49 +07:00
David Spencer
d94fd939a2 academic/omlibraries: Removed. 
Depends on openmodelica, which has been removed.
 2016-04-19 22:47:46 +07:00
David Spencer
638f131d47 academic/lpsolve: Patched to fix build failure. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2016-04-12 17:34:23 +07:00
Willy Sudiarto Raharjo
35008a2fe1 academic/sage: Updated for version 7.1. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2016-04-05 23:42:00 -05:00
Willy Sudiarto Raharjo
3c81227b9b academic/stellarium: Updated for version 0.14.3. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2016-03-24 17:07:26 +07:00
Robby Workman
204b2d6242 academic/loggerpro: Added (data-collection and analysis software) 
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
 2016-03-20 07:37:55 +07:00
Matteo Bernardini
6b365938ac academic/scipy: Fix dowload link. 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2016-03-12 06:42:40 +07:00
Petar Petrov
c1e6058dcc academic/ugene: Updated for version 1.21.0. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2016-03-06 18:50:22 +07:00
Willy Sudiarto Raharjo
2a24e2765d academic/openmodelica: Removed (no longer build). 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2016-03-06 09:30:22 +07:00
Jheengut Pritvi
7bab9815d4 academic/spatialite_gui: Update DOWNLOAD url. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2016-02-27 13:22:32 +07:00
David Spencer
6f1acb7518 academic/tophat: Support alternate tarball name. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2016-02-23 00:57:48 +07:00
Willy Sudiarto Raharjo
3a7ea11de4 multiple: Update email address. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2016-02-22 22:11:47 +07:00
Willy Sudiarto Raharjo
55988a5e80 academic/tophat: Fix Build. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2016-02-06 03:36:48 +07:00
Petar Petrov
1c78256490 academic/vcftools: version bump 2016-02-05 07:02:20 +07:00
Petar Petrov
380773085c academic/spades: version bump 2016-02-05 07:02:20 +07:00
Petar Petrov
6fffb27d21 academic/snpEff: version bump 2016-02-05 07:02:20 +07:00
Petar Petrov
b5925d8c21 academic/seaview: minor version bump 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2016-02-05 07:02:20 +07:00
Petar Petrov
8af4cfe858 academic/QtiPlot: correct a few paths 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2016-02-05 07:02:20 +07:00
Petar Petrov
8b9883543c academic/mrbayes: version bump 2016-02-05 07:02:20 +07:00
Petar Petrov
09248e745f academic/mafft: version bump 2016-02-05 07:02:20 +07:00
Petar Petrov
2019564010 academic/ij-plugins-LOCI: version bump 2016-02-05 07:02:20 +07:00
Petar Petrov
932b7d0962 academic/genometools: version bump 2016-02-05 07:02:20 +07:00
Petar Petrov
d441e80884 academic/fastqc: version bump 2016-02-05 07:02:20 +07:00