Commit graph

75480 commits

Author SHA1 Message Date
Petar Petrov
3682b579dd
academic/muscle: update copyright years
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:12 +07:00
Petar Petrov
eaa1ac6069
academic/mrbayes: update copyright years
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:12 +07:00
Petar Petrov
f64dd43a12
libraries/libcifpp: added. Dependency for mkDSSP
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:12 +07:00
Petar Petrov
159c498151
academic/mkDSSP. update for version 4.0_git6338c83
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:12 +07:00
Petar Petrov
045de4bad3
academic/meme-suite: update for version 5.3.3
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:12 +07:00
Petar Petrov
b809ee9794
academic/meme-db-tgene: update copyright years
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:12 +07:00
Petar Petrov
002098312f
academic/meme-db-motif: update for version 12.21
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:12 +07:00
Petar Petrov
88e83b22a1
academic/meme-db-gomo: update copyright years
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:11 +07:00
Petar Petrov
1213e0ef77
academic/megax: update for version 10.2.5_1
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:11 +07:00
Petar Petrov
d8a200cc2a
academic/mafft: update for version 7.475
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:11 +07:00
Petar Petrov
f97bef7cfa
academic/lalnview: update copyright years
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:11 +07:00
Petar Petrov
12b429698b
academic/kraken: update copyright year
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:11 +07:00
Petar Petrov
f327f7002a
academic/jellyfish_k-mer: update copyright years
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:11 +07:00
Petar Petrov
91ae47117f
academic/jalview: update for version 2.11.1.4
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:11 +07:00
Petar Petrov
71d201f92c
academic/io_lib. update for version 1.14.14
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:11 +07:00
Petar Petrov
f242439635
academic/hyphy/: update for version 2.5.31
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:10 +07:00
Petar Petrov
91059909c5
academic/genpak: misc cleanups
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:10 +07:00
Petar Petrov
4a818f17e3
academic/genometools: add patch for gcc10 and fix build
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:10 +07:00
Petar Petrov
8493b05234
academic/geneconv: misc cleanups
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:10 +07:00
Petar Petrov
103e8ef659
academic/gelemental: remove unnecessary patch
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:10 +07:00
Petar Petrov
d5eb75058c
academic/gchemutils: update copyright info
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:10 +07:00
Petar Petrov
35850a24ad
academic/finchtv: update webpage link
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:10 +07:00
Petar Petrov
5439426bc8
academic/fiji: update for version 20201104_1356
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:09 +07:00
Petar Petrov
e39996cfac
academic/exonerate: update copyright years
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:09 +07:00
Petar Petrov
39ea44df1a
academic/diamond: update copyright years
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:09 +07:00
Petar Petrov
5ee86400cf
academic/datamash: update copyright years
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:09 +07:00
Petar Petrov
19c74ff164
academic/cutadapt: update copyright years
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:09 +07:00
Petar Petrov
cd2507649b
academic/cufflinks: use binaries
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:09 +07:00
Petar Petrov
f703b64e18
academic/clustalw: misc cleanups
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:08 +07:00
Petar Petrov
31d4b2d95b
academic/clustalo: update copyright years
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:08 +07:00
Petar Petrov
34f2b37f23
academic/clark-ugene: update copyright year
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:08 +07:00
Petar Petrov
0bb12103cd
academic/cistrome-mdseqpos: fis REQUIRES and build with python2
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:08 +07:00
Petar Petrov
aad0763840
academic/cistrome-extra: fix download link
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:08 +07:00
Petar Petrov
1dcb094055
academic/cistrome-conductGO: update copyright years
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:08 +07:00
Petar Petrov
0fa3033264
academic/cistrome-MACS: update copyright years
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:08 +07:00
Petar Petrov
a142fbd076
academic/cistrome-CEAS: update copyright year
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:07 +07:00
Petar Petrov
dc12beb5b8
academic/cap3: use x84_64 not opteron64 binary
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:07 +07:00
Petar Petrov
e4835605fb
academic/bwa: fix build -fcommon
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:07 +07:00
Petar Petrov
f4f853a6a1
academic/bppsuite: update copyright year
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:07 +07:00
Petar Petrov
ac48a5b689
academic/bpp1.9-* update copyright year
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:07 +07:00
Petar Petrov
676d7576a6
academic/bpp-seq-omics: update copyright year
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:07 +07:00
Petar Petrov
271c2d50b9
academic/bpp-seq: update copyright year
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:07 +07:00
Petar Petrov
915048f2b9
academic/bpp-popgen: update copyright year
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:06 +07:00
Petar Petrov
0a341c5970
academic/bpp-phyl-omics: update copyright year
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:06 +07:00
Petar Petrov
b643ebeb8d
academic/bpp-phyl: update copyright year
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:06 +07:00
Petar Petrov
1896cb1cde
academic/bpp-core: update copyright year
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:06 +07:00
Petar Petrov
f2480300c7
academic/bowtie: update for version 1.3.0
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:06 +07:00
Petar Petrov
d8f1bb0ca5
academic/biopython: update for version 1.78 + fix build with python3
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:06 +07:00
Petar Petrov
f1ba9aebb8
academic/bedtools: update for version 2.30.0
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:06 +07:00
Petar Petrov
2d9b1f0330
academic/bedGraphToBigWig: update copyright year
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2021-05-18 23:40:05 +07:00