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academic/pysam: Updated for version 0.21.0.

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Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com>

Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
This commit is contained in:
brobr 2023-04-13 17:11:57 +01:00 committed by Willy Sudiarto Raharjo
parent 60ea40def8
commit 68392eebc4
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GPG key ID: 3F617144D7238786
2 changed files with 6 additions and 6 deletions
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6
academic/pysam/pysam.SlackBuild
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@ -2,7 +2,7 @@
# Slackware build script for pysam # Slackware build script for pysam
# Copyright 2017-2022 Rob van Nues # Copyright 2017-2023 Rob van Nues
# All rights reserved. # All rights reserved.
# #
# Redistribution and use of this script, with or without modification, is # Redistribution and use of this script, with or without modification, is
@ -25,7 +25,7 @@
cd $(dirname $0) ; CWD=$(pwd) cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=pysam PRGNAM=pysam
VERSION=${VERSION:-0.20.0} VERSION=${VERSION:-0.21.0}
BUILD=${BUILD:-1} BUILD=${BUILD:-1}
TAG=${TAG:-_SBo} TAG=${TAG:-_SBo}
PKGTYPE=${PKGTYPE:-tgz} PKGTYPE=${PKGTYPE:-tgz}
@ -80,7 +80,7 @@ find -L . \
\( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \ \( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \
-o -perm 440 -o -perm 400 \) -exec chmod 644 {} \; -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
# pysam now at htslib-1.16; SBo-htslib is at 1.16: # pysam now at htslib-1.17; SBo-htslib is at 1.17:
# can use system htslib: # can use system htslib:
export HTSLIB_LIBRARY_DIR=/usr/lib$LIBDIRSUFFIX export HTSLIB_LIBRARY_DIR=/usr/lib$LIBDIRSUFFIX
export HTSLIB_INCLUDE_DIR=/usr/include export HTSLIB_INCLUDE_DIR=/usr/include

6
academic/pysam/pysam.info
View file

@ -1,8 +1,8 @@
PRGNAM="pysam" PRGNAM="pysam"
VERSION="0.20.0" VERSION="0.21.0"
HOMEPAGE="https://github.com/pysam-developers/pysam" HOMEPAGE="https://github.com/pysam-developers/pysam"
DOWNLOAD="https://pypi.python.org/packages/source/p/pysam/pysam-0.20.0.tar.gz" DOWNLOAD="https://pypi.python.org/packages/source/p/pysam/pysam-0.21.0.tar.gz"
MD5SUM="765653d9a606fb992670803d2633becb" MD5SUM="dca7fb36d2cf69ef887fe05ddd726998"
DOWNLOAD_x86_64="" DOWNLOAD_x86_64=""
MD5SUM_x86_64="" MD5SUM_x86_64=""
REQUIRES="htslib" REQUIRES="htslib"