2018-12-31 02:30:54 +01:00
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Prior to the introduction of HTSlib, SAMtools and BCFtools were distributed
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in a single samtools-0.1.x package.
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This old version remains available from SBo as samtools-legacy
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2013-12-14 02:02:52 +01:00
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2018-12-31 02:30:54 +01:00
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Samtools is now distributed as an individual package.
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Installation is set up so that the code uses an external HTSlib (also at SBo).
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Although deprecated upstream, in the case that people need parts of samtools-legacy
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(e.g header files or libbam) these can be installed from this package by modifying
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the samtools.Slackbuild.
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2013-12-14 02:02:52 +01:00
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2018-12-31 02:30:54 +01:00
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Note that the sam.h of htslib differs from sam.h coming with samtools.
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