Juan M. Lasca 24e3d37a88 academic/plus42: Updated for version 1.0.16. ... Signed-off-by: bedlam <dave@slackbuilds.org> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>		2023-04-01 09:14:09 +07:00
..
3D-ICE
abntex
aenig4
aeskulap
aline
aliview
AlphaPlot
amd
amplicon
amplifx
antiprism
archaeopteryx
aris
arka
armadillo
arpack
arpack-ng
artha
avl
avogadroapp
avogadrolibs	academic/avogadrolibs: Patched to fix cmake errors.	2023-03-25 10:01:52 +07:00
bcftools
bedGraphToBigWig
bedtools
biblesync
bibletime
bibus
biopython
boinc
bowtie
bowtie2
bowtie2-legacy
bpp-core
bpp-phyl
bpp-phyl-omics
bpp-popgen
bpp-seq
bpp-seq-omics
bpp1.9-numcalc
bpp1.9-phyl
bpp1.9-seq
bpp1.9-utils
bppsuite
btf
bwa
cadabra2	academic/cadabra2: Update README.	2023-01-07 08:13:38 +07:00
CAFS_divergence
calc
calcoo
camd
cap3
CAPS_coevolution
cblas
ccolamd
cdo
celestia
chartgeany
chemtool
cholmod
cistrome-CEAS
cistrome-conductGO
cistrome-extra
cistrome-MACS
cistrome-mdseqpos
clark-ugene
cld2
clustalo
clustalw
clustalx
colamd
colin
convertall
copasi	academic/copasi: Updated for version 4.39.272.	2023-02-04 07:19:52 +07:00
cryptominisat
csparse
cufflinks
cutadapt
cvc4
cxsparse
dakota	academic/dakota: Updated for version 6.17.0.	2023-01-28 08:23:05 +07:00
Data2FCS
datamash
DendroPy
diamond
dimod
DRAMPower
DRAMSim2
DRAMsim3
DRAMSys	academic/DRAMSys: Fix github tarball handling.	2023-01-07 08:13:28 +07:00
ds9	academic/ds9: Updated for version 8.4.1.	2023-02-04 07:19:56 +07:00
dwave-cloud-client
dwave-greedy
dwave-hybrid
dwave-inspector
dwave-neal
dwave-networkx
dwave-ocean-sdk
dwave-preprocessing
dwave-system
dwave-tabu
dwavebinarycsp
easy_spice
ed-v6
edsim51di
elk
EMBASSY
EMBOSS
engauge
ent
eprover
equalx
ess
evopedia_qt
exonerate
extrema
fann
fastqc
FCSalyzer
fet	academic/fet: Updated for version 6.8.7.	2023-03-25 10:01:49 +07:00
fiji
finchtv
fityk
flann
flexbar
free42
FreeFem	academic/FreeFem: Updated for version 4.12.	2023-01-07 08:03:29 +07:00
g3data
Gabedit
galculator
gaw3	academic/gaw3: Updated for version 20220315.	2023-04-01 09:14:08 +07:00
Gblocks
gchemutils
gcompris-qt	academic/gcompris-qt: Updated for version 3.2.	2023-03-31 06:01:14 +07:00
geda-gaf
gelemental
gem5
geneconv
genius
genometools
genpak
GeoGebra
geomview	academic/geomview: Updated for version 1.9.5.	2023-02-04 07:19:52 +07:00
gerbv
getdp
getfem
ggobi
ghemical
glpk
glvis
gmsh	academic/gmsh: Updated for version 4.11.1.	2023-01-14 08:50:10 +07:00
gnucap
gp2fasta
gpredict
grace
gresistor
gretl
gri
Gridcoin-Research
gromacs	academic/gromacs: Minor template nitpick.	2023-02-18 10:07:13 +07:00
grpn
gspiceui
gtkwave
gtypist
gwyddion
h5utils	academic/h5utils: Updated for version 1.13.2.	2023-02-18 10:06:44 +07:00
harminv	academic/harminv: Updated for version 1.4.2.	2023-02-18 10:06:44 +07:00
HMMER
hyphy
IGV
io_lib
iqtree
irsim
isoelectric-point
iTest
itex2mml
ITK
jalview
jellyfish_k-mer
jpicedt
jugglinglab
karma
klavaro
klu
knime
kraken
Kst	academic/Kst: Updated for version 20221025_5fdd819.	2023-02-22 12:09:51 +07:00
ktikz
kurso
labplot2	academic/labplot2: Align with template.	2023-02-18 10:07:03 +07:00
ladr
laghos
lalnview
lapack95
lapacke
latex2html
ldl
libghemical
link-grammar
locarna
lpsolve
mafft
magic
mathics
mathjax2
mathomatic
matio	academic/matio: Updated for version 1.5.23.	2023-02-11 09:30:46 +07:00
maxima
meep	academic/meep: Updated for version 1.25.0.	2023-02-25 09:18:06 +07:00
megax
meme-db-gomo
meme-db-motif
meme-db-tgene
meme-suite
mendeleydesktop
metalwalls
MetaPhlAn2
metis
mfem
minorminer
mkDSSP
molequeue
mpb
mrbayes
mumsa
muscle
muscle5
ncbi-blast
ncbi-blast+
ncbi-rmblastn
nco	academic/nco: Updated for version 5.1.4.	2023-01-14 08:50:01 +07:00
ncview
ngspice	academic/ngspice: Updated for version 39.	2023-02-25 08:52:03 +07:00
novocraft
NWChem
octave
openboard
OpenFOAM
OpenMM
OpenVSP	academic/OpenVSP: Moved from graphics. Updated for version 3.31.1.	2023-01-21 10:22:03 +07:00
pal2nal
paml
pamlX
papi
pari
parmetis
patsy
pcalc
pcb
penaltymodel
perlprimer
petsc
PhyML
pianobooster
plasmidomics
plus42	academic/plus42: Updated for version 1.0.16.	2023-04-01 09:14:09 +07:00
pomoxis	academic/pomoxis: Added (bioinformatics tools for nanopore research)	2023-03-18 09:50:22 +07:00
prank-msa
primer3
pspp	academic/pspp: Updated for version 1.6.2.	2023-03-04 07:16:37 +07:00
pulseview
PyAMG
pyCRAC
pyfits
pysam
python2-kiwisolver
python2-scipy
python3-ase
python3-scipy
qalculate-gtk
qcl
qhull
qrupdate
qucs
qucs-s	academic/qucs-s: Added (circuit simulator)	2023-03-25 10:01:48 +07:00
R	academic/R: Updated for version 4.2.3 + fix build with curl 8.	2023-03-26 09:57:20 +07:00
ramulator
RAxML
rbio
reduce-algebra
RepeatMasker
root
rpy2
sage
sage-bin
samtools
samtools-legacy
scidavis
scilab
seaview
seqkit
SeqMonk
sequence-analysis
Shark
sigrok-cli
SimEng
siril
smath-studio
snpEff
solfege
spades
speedcrunch
spiceopus
spidey
spqr
squizz
staden
STAR
stellarium
stellarsolver
stringtie
SU2
suitesparse
suitesparseconfig
sundials
sword
sword-data-kjv
t_coffee
tabix-legacy
tiemu	academic/tiemu: New maintainer.	2023-02-25 09:18:10 +07:00
tilem
tilem2
tkgate
topdraw
tophat
treebest-ensembl
TreeGraph
treeviewx
trfind
trimmomatic
tuxmath
tuxtype2
ucsc-blat
ugene
umfpack
units
vCAPS_coevolution
vcftools
velocyto	academic/velocyto: Use correct github URL.	2023-03-25 10:02:01 +07:00
verilator
verilog
veusz
ViennaRNA	academic/ViennaRNA: Fix build.	2023-03-11 21:19:45 +07:00
voro++
wehi-cellsymphony
wehi-deid
wehi-hackit
wehi-weasel
WEVOTE
wmcalc	academic/wmcalc: Fix doinst.sh.	2022-12-31 09:14:48 +07:00
WolframEngine	academic/WolframEngine: Updated for version 13.2.0.	2023-03-11 21:15:48 +07:00
WordNet
wxMaxima
x48
xcircuit	academic/xcircuit: Updated for version 3.10.30. New maintainer.	2023-03-25 10:01:45 +07:00
xephem
xflr5
xfoil
xiphos	academic/xiphos: Update DEP.	2023-02-25 08:54:00 +07:00
xoscope
xsimd
yices2
z3
ZeGrapher
zotero	academic/zotero: Updated for version 6.0.22.	2023-03-04 08:06:31 +07:00