slackbuilds_ponce/academic/vcftools/use-dpkg-buildflags.patch
Petar Petrov 2ac6480638 academic/vcftools: Added (A program designed for working with VCF).
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2013-12-14 10:53:06 -06:00

40 lines
1.1 KiB
Diff

Author: Andreas Tille <tille@debian.org>
Date: Sat, 12 May 2012 09:31:58 +0200
Description: Enable propagation of hardening flags
Index: vcftools_0.1.11/cpp/Makefile
===================================================================
--- vcftools_0.1.11.orig/cpp/Makefile 2013-06-13 16:40:54.000000000 +0200
+++ vcftools_0.1.11/cpp/Makefile 2013-06-27 19:54:45.000000000 +0200
@@ -12,9 +12,9 @@
VCFTOOLS_PCA = 0
endif
# Compiler flags
-CFLAGS = -O2 -m64
+CFLAGS += -O2
#CFLAGS = -Wall -O2 -pg -m64
-CPPFLAGS = -O2 -D_FILE_OFFSET_BITS=64
+CPPFLAGS += -O2 -D_FILE_OFFSET_BITS=64
#CPPFLAGS = -O2 -Wall -pg -D_FILE_OFFSET_BITS=64
# Included libraries (zlib)
LIB = -lz
@@ -38,7 +38,7 @@
endif
vcftools: $(OBJS)
- $(CPP) $(CPPFLAGS) $(OBJS) -o vcftools $(LIB)
+ $(CPP) $(CPPFLAGS) $(OBJS) $(LDFLAGS) -o vcftools $(LIB)
ifdef BINDIR
cp $(CURDIR)/$@ $(BINDIR)/$@
endif
@@ -50,8 +50,8 @@
-include $(OBJS:.o=.d)
%.o: %.cpp
- $(CPP) -c $(CPPFLAGS) $*.cpp -o $*.o
- $(CPP) -MM $(CPPFLAGS) $*.cpp > $*.d
+ $(CPP) -c $(CPPFLAGS) $(CFLAGS) $(LDFLAGS) $*.cpp -o $*.o
+ $(CPP) -MM $(CPPFLAGS) $(CFLAGS) $(LDFLAGS) $*.cpp > $*.d
# remove compilation products
clean: