slackbuilds_ponce/academic/ncbi-rmblastn
B. Watson de0652471d
academic/ncbi-rmblastn: Allow ARCH=i586 in environment.
Signed-off-by: B. Watson <yalhcru@gmail.com>

Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2022-03-20 20:45:13 +07:00
..
ncbi-rmblastn.info
ncbi-rmblastn.SlackBuild academic/ncbi-rmblastn: Allow ARCH=i586 in environment. 2022-03-20 20:45:13 +07:00
README
slack-desc

RMBlast is a RepeatMasker compatible version of the standard NCBI BLAST
suite. The primary difference between this distribution and the NCBI
distribution is the addition of a new program "rmblastn" for use with
RepeatMasker and RepeatModeler.

RMBlast supports RepeatMasker searches by adding a few necessary
features to the stock NCBI blastn program. These include:

- Support for custom matrices ( without KA-Statistics )
- Support for cross_match-like complexity adjusted scoring
  (Cross_match is Phil Green's seeded smith-waterman search algorithm:
   www.phrap.org )
- Support for cross_match-like masklevel filtering.