mirror of
https://github.com/Ponce/slackbuilds
synced 2024-12-05 00:55:44 +01:00
0ff09b1f18
Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
704 lines
20 KiB
Diff
704 lines
20 KiB
Diff
diff --git a/Demo/Makefile.am b/Demo/Makefile.am
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new file mode 100644
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--- /dev/null
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+++ b/Demo/Makefile.am
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@@ -0,0 +1,109 @@
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+AM_CPPFLAGS = -I$(top_srcdir)/Include $(CHOLMOD_CFLAGS) $(UFCONFIG_CFLAGS)
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+LDADD = $(top_builddir)/Source/libspqr.la
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+
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+EXTRA_DIST = \
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+ README.txt \
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+ qrdemo_diary.txt \
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+ qrdemo_out.txt \
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+ qrdemoc_out.txt
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+
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+check_PROGRAMS = \
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+ qrsimple \
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+ qrsimplec \
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+ qrdemo \
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+ qrdemoc
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+
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+qrsimple_SOURCES = qrsimple.cpp
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+qrsimplec_SOURCES = qrsimplec.c
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+qrsimplec_CFLAGS = $(AM_CFLAGS) -ansi
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+qrdemo_SOURCES = qrdemo.cpp
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+qrdemoc_SOURCES = qrdemoc.c
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+qrdemoc_CFLAGS = $(AM_CFLAGS) -ansi
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+
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+MATRICES = \
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+ ../Matrix/GD01_b.mtx \
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+ ../Matrix/GD06_theory.mtx \
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+ ../Matrix/GD98_a.mtx \
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+ ../Matrix/LFAT5.mtx \
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+ ../Matrix/Ragusa16.mtx \
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+ ../Matrix/Tina_AskCal.mtx \
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+ ../Matrix/Tina_AskCal_perm.mtx \
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+ ../Matrix/a0.mtx \
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+ ../Matrix/a04.mtx \
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+ ../Matrix/a1.mtx \
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+ ../Matrix/a2.mtx \
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+ ../Matrix/a4.mtx \
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+ ../Matrix/ash219.mtx \
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+ ../Matrix/b1_ss.mtx \
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+ ../Matrix/bcspwr01.mtx \
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+ ../Matrix/bfwa62.mtx \
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+ ../Matrix/c2.mtx \
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+ ../Matrix/c32.mtx \
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+ ../Matrix/lfat5b.mtx \
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+ ../Matrix/lp_share1b.mtx \
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+ ../Matrix/lpi_galenet.mtx \
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+ ../Matrix/lpi_itest6.mtx \
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+ ../Matrix/r2.mtx \
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+ ../Matrix/s32.mtx \
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+ ../Matrix/west0067.mtx \
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+ ../Matrix/young1c.mtx
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+
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+check-local: $(check_PROGRAMS) $(MATRICES)
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+ -./qrsimple < ../Matrix/ash219.mtx
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+ -./qrsimplec < ../Matrix/ash219.mtx
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+ -./qrsimple < ../Matrix/west0067.mtx
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+ -./qrsimplec < ../Matrix/west0067.mtx
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+ -./qrdemo < ../Matrix/a2.mtx
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+ -./qrdemo < ../Matrix/r2.mtx
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+ -./qrdemo < ../Matrix/a04.mtx
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+ -./qrdemo < ../Matrix/a2.mtx
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+ -./qrdemo < ../Matrix/west0067.mtx
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+ -./qrdemo < ../Matrix/c2.mtx
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+ -./qrdemo < ../Matrix/a0.mtx
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+ -./qrdemo < ../Matrix/lfat5b.mtx
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+ -./qrdemo < ../Matrix/bfwa62.mtx
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+ -./qrdemo < ../Matrix/LFAT5.mtx
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+ -./qrdemo < ../Matrix/b1_ss.mtx
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+ -./qrdemo < ../Matrix/bcspwr01.mtx
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+ -./qrdemo < ../Matrix/lpi_galenet.mtx
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+ -./qrdemo < ../Matrix/lpi_itest6.mtx
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+ -./qrdemo < ../Matrix/ash219.mtx
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+ -./qrdemo < ../Matrix/a4.mtx
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+ -./qrdemo < ../Matrix/s32.mtx
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+ -./qrdemo < ../Matrix/c32.mtx
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+ -./qrdemo < ../Matrix/lp_share1b.mtx
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+ -./qrdemo < ../Matrix/a1.mtx
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+ -./qrdemo < ../Matrix/GD06_theory.mtx
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+ -./qrdemo < ../Matrix/GD01_b.mtx
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+ -./qrdemo < ../Matrix/Tina_AskCal_perm.mtx
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+ -./qrdemo < ../Matrix/Tina_AskCal.mtx
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+ -./qrdemo < ../Matrix/GD98_a.mtx
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+ -./qrdemo < ../Matrix/Ragusa16.mtx
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+ -./qrdemo < ../Matrix/young1c.mtx
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+ -./qrdemoc < ../Matrix/a2.mtx
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+ -./qrdemoc < ../Matrix/r2.mtx
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+ -./qrdemoc < ../Matrix/a04.mtx
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+ -./qrdemoc < ../Matrix/a2.mtx
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+ -./qrdemoc < ../Matrix/west0067.mtx
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+ -./qrdemoc < ../Matrix/c2.mtx
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+ -./qrdemoc < ../Matrix/a0.mtx
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+ -./qrdemoc < ../Matrix/lfat5b.mtx
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+ -./qrdemoc < ../Matrix/bfwa62.mtx
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+ -./qrdemoc < ../Matrix/LFAT5.mtx
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+ -./qrdemoc < ../Matrix/b1_ss.mtx
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+ -./qrdemoc < ../Matrix/bcspwr01.mtx
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+ -./qrdemoc < ../Matrix/lpi_galenet.mtx
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+ -./qrdemoc < ../Matrix/lpi_itest6.mtx
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+ -./qrdemoc < ../Matrix/ash219.mtx
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+ -./qrdemoc < ../Matrix/a4.mtx
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+ -./qrdemoc < ../Matrix/s32.mtx
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+ -./qrdemoc < ../Matrix/c32.mtx
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+ -./qrdemoc < ../Matrix/lp_share1b.mtx
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+ -./qrdemoc < ../Matrix/a1.mtx
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+ -./qrdemoc < ../Matrix/GD06_theory.mtx
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+ -./qrdemoc < ../Matrix/GD01_b.mtx
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+ -./qrdemoc < ../Matrix/Tina_AskCal_perm.mtx
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+ -./qrdemoc < ../Matrix/Tina_AskCal.mtx
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+ -./qrdemoc < ../Matrix/GD98_a.mtx
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+ -./qrdemoc < ../Matrix/Ragusa16.mtx
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+ -./qrdemoc < ../Matrix/young1c.mtx
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diff --git a/Doc/Makefile.am b/Doc/Makefile.am
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new file mode 100644
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--- /dev/null
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+++ b/Doc/Makefile.am
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@@ -0,0 +1,24 @@
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+EXTRA_DIST = \
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+ ChangeLog \
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+ README.txt \
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+ gpl.txt \
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+ algo_spqr.pdf \
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+ spqr.pdf
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+
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+dist_noinst_DATA = \
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+ spqr_user_guide.tex \
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+ spqr_user_guide.bib
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+
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+pdf_DATA = \
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+ spqr_user_guide.pdf \
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+ algo_spqr.pdf \
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+ spqr.pdf
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+
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+%.pdf: %.tex %.bib
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+ pdflatex $*
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+ bibtex $*
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+ pdflatex $*
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+ pdflatex $*
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+
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+clean-local:
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+ -$(RM) *.aux *.bbl *.blg *.log *.out
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diff --git a/Include/Makefile.am b/Include/Makefile.am
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new file mode 100644
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--- /dev/null
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+++ b/Include/Makefile.am
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@@ -0,0 +1,6 @@
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+pkgincludedir = $(includedir)/spqr
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+pkginclude_HEADERS = \
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+ SuiteSparseQR.hpp \
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+ SuiteSparseQR_C.h \
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+ SuiteSparseQR_definitions.h \
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+ spqr.hpp
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diff --git a/Makefile.am b/Makefile.am
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new file mode 100644
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--- /dev/null
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+++ b/Makefile.am
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@@ -0,0 +1,5 @@
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+SUBDIRS = Include Source Matrix Demo Doc
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+EXTRA_DIST = README.txt
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+
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+pkgconfigdir = $(libdir)/pkgconfig
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+pkgconfig_DATA = spqr.pc
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diff --git a/Matrix/Makefile.am b/Matrix/Makefile.am
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new file mode 100644
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--- /dev/null
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+++ b/Matrix/Makefile.am
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@@ -0,0 +1,32 @@
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+EXTRA_DIST = \
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+ README.txt
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+
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+dist_noinst_DATA = \
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+ GD01_b.mtx \
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+ GD06_theory.mtx \
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+ GD98_a.mtx \
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+ LFAT5.mtx \
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+ Ragusa16.mtx \
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+ Tina_AskCal.mtx \
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+ Tina_AskCal_perm.mtx \
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+ a0.mtx \
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+ a04.mtx \
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+ a1.mtx \
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+ a2.mtx \
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+ a4.mtx \
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+ arrow.mtx \
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+ ash219.mtx \
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+ b1_ss.mtx \
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+ bcspwr01.mtx \
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+ bfwa62.mtx \
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+ c2.mtx \
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+ c32.mtx \
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+ lfat5b.mtx \
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+ lp_share1b.mtx \
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+ lpi_galenet.mtx \
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+ lpi_itest6.mtx \
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+ pwr01b.mtx \
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+ r2.mtx \
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+ s32.mtx \
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+ west0067.mtx \
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+ young1c.mtx
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diff --git a/Source/Makefile.am b/Source/Makefile.am
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new file mode 100644
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--- /dev/null
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+++ b/Source/Makefile.am
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@@ -0,0 +1,50 @@
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+AM_CPPFLAGS = -I$(top_srcdir)/Include $(TBB_CFLAGS) $(CHOLMOD_CFLAGS) $(UFCONFIG_CFLAGS)
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+AM_CPPFLAGS += $(SPQR_NPARTITION)
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+AM_CPPFLAGS += $(SPQR_HAVE_TBB)
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+
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+lib_LTLIBRARIES = libspqr.la
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+
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+libspqr_la_SOURCES = \
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+ SuiteSparseQR.cpp \
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+ SuiteSparseQR_C.cpp \
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+ SuiteSparseQR_expert.cpp \
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+ SuiteSparseQR_qmult.cpp \
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+ spqr_1colamd.cpp \
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+ spqr_1factor.cpp \
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+ spqr_1fixed.cpp \
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+ spqr_analyze.cpp \
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+ spqr_append.cpp \
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+ spqr_assemble.cpp \
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+ spqr_cpack.cpp \
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+ spqr_csize.cpp \
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+ spqr_cumsum.cpp \
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+ spqr_debug.cpp \
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+ spqr_factorize.cpp \
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+ spqr_fcsize.cpp \
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+ spqr_freefac.cpp \
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+ spqr_freenum.cpp \
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+ spqr_freesym.cpp \
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+ spqr_front.cpp \
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+ spqr_fsize.cpp \
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+ spqr_happly.cpp \
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+ spqr_happly_work.cpp \
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+ spqr_hpinv.cpp \
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+ spqr_kernel.cpp \
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+ spqr_larftb.cpp \
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+ spqr_maxcolnorm.cpp \
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+ spqr_panel.cpp \
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+ spqr_parallel.cpp \
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+ spqr_rconvert.cpp \
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+ spqr_rcount.cpp \
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+ spqr_rhpack.cpp \
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+ spqr_rmap.cpp \
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+ spqr_rsolve.cpp \
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+ spqr_shift.cpp \
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+ spqr_stranspose1.cpp \
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+ spqr_stranspose2.cpp \
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+ spqr_tol.cpp \
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+ spqr_trapezoidal.cpp \
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+ spqr_type.cpp
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+
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+libspqr_la_LIBADD = $(TBB_LIBS) $(CHOLMOD_LIBS) $(LAPACK_LIBS) $(BLAS_LIBS) -lm
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+libspqr_la_LDFLAGS = -no-undefined -version-info 3:2:2
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diff --git a/acx_blas.m4 b/acx_blas.m4
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new file mode 100644
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--- /dev/null
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+++ b/acx_blas.m4
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@@ -0,0 +1,191 @@
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+##### http://autoconf-archive.cryp.to/acx_blas.html
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+#
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+# SYNOPSIS
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+#
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+# ACX_BLAS([ACTION-IF-FOUND[, ACTION-IF-NOT-FOUND]])
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+#
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+# DESCRIPTION
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+#
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+# This macro looks for a library that implements the BLAS
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+# linear-algebra interface (see http://www.netlib.org/blas/). On
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+# success, it sets the BLAS_LIBS output variable to hold the
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+# requisite library linkages.
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+#
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+# To link with BLAS, you should link with:
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+#
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+# $BLAS_LIBS $LIBS $FLIBS
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+#
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+# in that order. FLIBS is the output variable of the
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+# AC_F77_LIBRARY_LDFLAGS macro (called if necessary by ACX_BLAS), and
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+# is sometimes necessary in order to link with F77 libraries. Users
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+# will also need to use AC_F77_DUMMY_MAIN (see the autoconf manual),
|
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+# for the same reason.
|
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+#
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+# Many libraries are searched for, from ATLAS to CXML to ESSL. The
|
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+# user may also use --with-blas=<lib> in order to use some specific
|
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+# BLAS library <lib>. In order to link successfully, however, be
|
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+# aware that you will probably need to use the same Fortran compiler
|
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+# (which can be set via the F77 env. var.) as was used to compile the
|
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+# BLAS library.
|
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+#
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+# ACTION-IF-FOUND is a list of shell commands to run if a BLAS
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+# library is found, and ACTION-IF-NOT-FOUND is a list of commands to
|
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+# run it if it is not found. If ACTION-IF-FOUND is not specified, the
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+# default action will define HAVE_BLAS.
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+#
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+# This macro requires autoconf 2.50 or later.
|
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+#
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+# LAST MODIFICATION
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+#
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+# 2007-07-29
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+#
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+# COPYLEFT
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+#
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+# Copyright (c) 2007 Steven G. Johnson <stevenj@alum.mit.edu>
|
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+#
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+# This program is free software: you can redistribute it and/or
|
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+# modify it under the terms of the GNU General Public License as
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+# published by the Free Software Foundation, either version 3 of the
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+# License, or (at your option) any later version.
|
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+#
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+# This program is distributed in the hope that it will be useful, but
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+# WITHOUT ANY WARRANTY; without even the implied warranty of
|
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+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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+# General Public License for more details.
|
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+#
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+# You should have received a copy of the GNU General Public License
|
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+# along with this program. If not, see
|
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+# <http://www.gnu.org/licenses/>.
|
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+#
|
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+# As a special exception, the respective Autoconf Macro's copyright
|
|
+# owner gives unlimited permission to copy, distribute and modify the
|
|
+# configure scripts that are the output of Autoconf when processing
|
|
+# the Macro. You need not follow the terms of the GNU General Public
|
|
+# License when using or distributing such scripts, even though
|
|
+# portions of the text of the Macro appear in them. The GNU General
|
|
+# Public License (GPL) does govern all other use of the material that
|
|
+# constitutes the Autoconf Macro.
|
|
+#
|
|
+# This special exception to the GPL applies to versions of the
|
|
+# Autoconf Macro released by the Autoconf Macro Archive. When you
|
|
+# make and distribute a modified version of the Autoconf Macro, you
|
|
+# may extend this special exception to the GPL to apply to your
|
|
+# modified version as well.
|
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+
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+AC_DEFUN([ACX_BLAS], [
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+AC_PREREQ(2.50)
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+AC_REQUIRE([AC_F77_LIBRARY_LDFLAGS])
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+acx_blas_ok=no
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|
+
|
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+AC_ARG_WITH(blas,
|
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+ [AC_HELP_STRING([--with-blas=<lib>], [use BLAS library <lib>])])
|
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+case $with_blas in
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+ yes | "") ;;
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+ no) acx_blas_ok=disable ;;
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+ -* | */* | *.a | *.so | *.so.* | *.o) BLAS_LIBS="$with_blas" ;;
|
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+ *) BLAS_LIBS="-l$with_blas" ;;
|
|
+esac
|
|
+
|
|
+# Get fortran linker names of BLAS functions to check for.
|
|
+AC_F77_FUNC(sgemm)
|
|
+AC_F77_FUNC(dgemm)
|
|
+
|
|
+acx_blas_save_LIBS="$LIBS"
|
|
+LIBS="$LIBS $FLIBS"
|
|
+
|
|
+# First, check BLAS_LIBS environment variable
|
|
+if test $acx_blas_ok = no; then
|
|
+if test "x$BLAS_LIBS" != x; then
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|
+ save_LIBS="$LIBS"; LIBS="$BLAS_LIBS $LIBS"
|
|
+ AC_MSG_CHECKING([for $sgemm in $BLAS_LIBS])
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|
+ AC_TRY_LINK_FUNC($sgemm, [acx_blas_ok=yes], [BLAS_LIBS=""])
|
|
+ AC_MSG_RESULT($acx_blas_ok)
|
|
+ LIBS="$save_LIBS"
|
|
+fi
|
|
+fi
|
|
+
|
|
+# BLAS linked to by default? (happens on some supercomputers)
|
|
+if test $acx_blas_ok = no; then
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|
+ save_LIBS="$LIBS"; LIBS="$LIBS"
|
|
+ AC_CHECK_FUNC($sgemm, [acx_blas_ok=yes])
|
|
+ LIBS="$save_LIBS"
|
|
+fi
|
|
+
|
|
+# BLAS in ATLAS library? (http://math-atlas.sourceforge.net/)
|
|
+if test $acx_blas_ok = no; then
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|
+ AC_CHECK_LIB(atlas, ATL_xerbla,
|
|
+ [AC_CHECK_LIB(f77blas, $sgemm,
|
|
+ [AC_CHECK_LIB(cblas, cblas_dgemm,
|
|
+ [acx_blas_ok=yes
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|
+ BLAS_LIBS="-lcblas -lf77blas -latlas"],
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+ [], [-lf77blas -latlas])],
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|
+ [], [-latlas])])
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|
+fi
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+
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+# BLAS in PhiPACK libraries? (requires generic BLAS lib, too)
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|
+if test $acx_blas_ok = no; then
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+ AC_CHECK_LIB(blas, $sgemm,
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+ [AC_CHECK_LIB(dgemm, $dgemm,
|
|
+ [AC_CHECK_LIB(sgemm, $sgemm,
|
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+ [acx_blas_ok=yes; BLAS_LIBS="-lsgemm -ldgemm -lblas"],
|
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+ [], [-lblas])],
|
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+ [], [-lblas])])
|
|
+fi
|
|
+
|
|
+# BLAS in Alpha CXML library?
|
|
+if test $acx_blas_ok = no; then
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+ AC_CHECK_LIB(cxml, $sgemm, [acx_blas_ok=yes;BLAS_LIBS="-lcxml"])
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|
+fi
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+
|
|
+# BLAS in Alpha DXML library? (now called CXML, see above)
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|
+if test $acx_blas_ok = no; then
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+ AC_CHECK_LIB(dxml, $sgemm, [acx_blas_ok=yes;BLAS_LIBS="-ldxml"])
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|
+fi
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+
|
|
+# BLAS in Sun Performance library?
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|
+if test $acx_blas_ok = no; then
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|
+ if test "x$GCC" != xyes; then # only works with Sun CC
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|
+ AC_CHECK_LIB(sunmath, acosp,
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|
+ [AC_CHECK_LIB(sunperf, $sgemm,
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|
+ [BLAS_LIBS="-xlic_lib=sunperf -lsunmath"
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+ acx_blas_ok=yes],[],[-lsunmath])])
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+ fi
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|
+fi
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+
|
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+# BLAS in SCSL library? (SGI/Cray Scientific Library)
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+if test $acx_blas_ok = no; then
|
|
+ AC_CHECK_LIB(scs, $sgemm, [acx_blas_ok=yes; BLAS_LIBS="-lscs"])
|
|
+fi
|
|
+
|
|
+# BLAS in SGIMATH library?
|
|
+if test $acx_blas_ok = no; then
|
|
+ AC_CHECK_LIB(complib.sgimath, $sgemm,
|
|
+ [acx_blas_ok=yes; BLAS_LIBS="-lcomplib.sgimath"])
|
|
+fi
|
|
+
|
|
+# BLAS in IBM ESSL library? (requires generic BLAS lib, too)
|
|
+if test $acx_blas_ok = no; then
|
|
+ AC_CHECK_LIB(blas, $sgemm,
|
|
+ [AC_CHECK_LIB(essl, $sgemm,
|
|
+ [acx_blas_ok=yes; BLAS_LIBS="-lessl -lblas"],
|
|
+ [], [-lblas $FLIBS])])
|
|
+fi
|
|
+
|
|
+# Generic BLAS library?
|
|
+if test $acx_blas_ok = no; then
|
|
+ AC_CHECK_LIB(blas, $sgemm, [acx_blas_ok=yes; BLAS_LIBS="-lblas"])
|
|
+fi
|
|
+
|
|
+AC_SUBST(BLAS_LIBS)
|
|
+
|
|
+LIBS="$acx_blas_save_LIBS"
|
|
+
|
|
+# Finally, execute ACTION-IF-FOUND/ACTION-IF-NOT-FOUND:
|
|
+if test x"$acx_blas_ok" = xyes; then
|
|
+ ifelse([$1],,AC_DEFINE(HAVE_BLAS,1,[Define if you have a BLAS library.]),[$1])
|
|
+ :
|
|
+else
|
|
+ acx_blas_ok=no
|
|
+ $2
|
|
+fi
|
|
+])dnl ACX_BLAS
|
|
diff --git a/acx_lapack.m4 b/acx_lapack.m4
|
|
new file mode 100644
|
|
--- /dev/null
|
|
+++ b/acx_lapack.m4
|
|
@@ -0,0 +1,133 @@
|
|
+##### http://autoconf-archive.cryp.to/acx_lapack.html
|
|
+#
|
|
+# SYNOPSIS
|
|
+#
|
|
+# ACX_LAPACK([ACTION-IF-FOUND[, ACTION-IF-NOT-FOUND]])
|
|
+#
|
|
+# DESCRIPTION
|
|
+#
|
|
+# This macro looks for a library that implements the LAPACK
|
|
+# linear-algebra interface (see http://www.netlib.org/lapack/). On
|
|
+# success, it sets the LAPACK_LIBS output variable to hold the
|
|
+# requisite library linkages.
|
|
+#
|
|
+# To link with LAPACK, you should link with:
|
|
+#
|
|
+# $LAPACK_LIBS $BLAS_LIBS $LIBS $FLIBS
|
|
+#
|
|
+# in that order. BLAS_LIBS is the output variable of the ACX_BLAS
|
|
+# macro, called automatically. FLIBS is the output variable of the
|
|
+# AC_F77_LIBRARY_LDFLAGS macro (called if necessary by ACX_BLAS), and
|
|
+# is sometimes necessary in order to link with F77 libraries. Users
|
|
+# will also need to use AC_F77_DUMMY_MAIN (see the autoconf manual),
|
|
+# for the same reason.
|
|
+#
|
|
+# The user may also use --with-lapack=<lib> in order to use some
|
|
+# specific LAPACK library <lib>. In order to link successfully,
|
|
+# however, be aware that you will probably need to use the same
|
|
+# Fortran compiler (which can be set via the F77 env. var.) as was
|
|
+# used to compile the LAPACK and BLAS libraries.
|
|
+#
|
|
+# ACTION-IF-FOUND is a list of shell commands to run if a LAPACK
|
|
+# library is found, and ACTION-IF-NOT-FOUND is a list of commands to
|
|
+# run it if it is not found. If ACTION-IF-FOUND is not specified, the
|
|
+# default action will define HAVE_LAPACK.
|
|
+#
|
|
+# LAST MODIFICATION
|
|
+#
|
|
+# 2007-07-29
|
|
+#
|
|
+# COPYLEFT
|
|
+#
|
|
+# Copyright (c) 2007 Steven G. Johnson <stevenj@alum.mit.edu>
|
|
+#
|
|
+# This program is free software: you can redistribute it and/or
|
|
+# modify it under the terms of the GNU General Public License as
|
|
+# published by the Free Software Foundation, either version 3 of the
|
|
+# License, or (at your option) any later version.
|
|
+#
|
|
+# This program is distributed in the hope that it will be useful, but
|
|
+# WITHOUT ANY WARRANTY; without even the implied warranty of
|
|
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
|
|
+# General Public License for more details.
|
|
+#
|
|
+# You should have received a copy of the GNU General Public License
|
|
+# along with this program. If not, see
|
|
+# <http://www.gnu.org/licenses/>.
|
|
+#
|
|
+# As a special exception, the respective Autoconf Macro's copyright
|
|
+# owner gives unlimited permission to copy, distribute and modify the
|
|
+# configure scripts that are the output of Autoconf when processing
|
|
+# the Macro. You need not follow the terms of the GNU General Public
|
|
+# License when using or distributing such scripts, even though
|
|
+# portions of the text of the Macro appear in them. The GNU General
|
|
+# Public License (GPL) does govern all other use of the material that
|
|
+# constitutes the Autoconf Macro.
|
|
+#
|
|
+# This special exception to the GPL applies to versions of the
|
|
+# Autoconf Macro released by the Autoconf Macro Archive. When you
|
|
+# make and distribute a modified version of the Autoconf Macro, you
|
|
+# may extend this special exception to the GPL to apply to your
|
|
+# modified version as well.
|
|
+
|
|
+AC_DEFUN([ACX_LAPACK], [
|
|
+AC_REQUIRE([ACX_BLAS])
|
|
+acx_lapack_ok=no
|
|
+
|
|
+AC_ARG_WITH(lapack,
|
|
+ [AC_HELP_STRING([--with-lapack=<lib>], [use LAPACK library <lib>])])
|
|
+case $with_lapack in
|
|
+ yes | "") ;;
|
|
+ no) acx_lapack_ok=disable ;;
|
|
+ -* | */* | *.a | *.so | *.so.* | *.o) LAPACK_LIBS="$with_lapack" ;;
|
|
+ *) LAPACK_LIBS="-l$with_lapack" ;;
|
|
+esac
|
|
+
|
|
+# Get fortran linker name of LAPACK function to check for.
|
|
+AC_F77_FUNC(cheev)
|
|
+
|
|
+# We cannot use LAPACK if BLAS is not found
|
|
+if test "x$acx_blas_ok" != xyes; then
|
|
+ acx_lapack_ok=noblas
|
|
+fi
|
|
+
|
|
+# First, check LAPACK_LIBS environment variable
|
|
+if test "x$LAPACK_LIBS" != x; then
|
|
+ save_LIBS="$LIBS"; LIBS="$LAPACK_LIBS $BLAS_LIBS $LIBS $FLIBS"
|
|
+ AC_MSG_CHECKING([for $cheev in $LAPACK_LIBS])
|
|
+ AC_TRY_LINK_FUNC($cheev, [acx_lapack_ok=yes], [LAPACK_LIBS=""])
|
|
+ AC_MSG_RESULT($acx_lapack_ok)
|
|
+ LIBS="$save_LIBS"
|
|
+ if test acx_lapack_ok = no; then
|
|
+ LAPACK_LIBS=""
|
|
+ fi
|
|
+fi
|
|
+
|
|
+# LAPACK linked to by default? (is sometimes included in BLAS lib)
|
|
+if test $acx_lapack_ok = no; then
|
|
+ save_LIBS="$LIBS"; LIBS="$LIBS $BLAS_LIBS $FLIBS"
|
|
+ AC_CHECK_FUNC($cheev, [acx_lapack_ok=yes])
|
|
+ LIBS="$save_LIBS"
|
|
+fi
|
|
+
|
|
+# Generic LAPACK library?
|
|
+for lapack in lapack lapack_rs6k; do
|
|
+ if test $acx_lapack_ok = no; then
|
|
+ save_LIBS="$LIBS"; LIBS="$BLAS_LIBS $LIBS"
|
|
+ AC_CHECK_LIB($lapack, $cheev,
|
|
+ [acx_lapack_ok=yes; LAPACK_LIBS="-l$lapack"], [], [$FLIBS])
|
|
+ LIBS="$save_LIBS"
|
|
+ fi
|
|
+done
|
|
+
|
|
+AC_SUBST(LAPACK_LIBS)
|
|
+
|
|
+# Finally, execute ACTION-IF-FOUND/ACTION-IF-NOT-FOUND:
|
|
+if test x"$acx_lapack_ok" = xyes; then
|
|
+ ifelse([$1],,AC_DEFINE(HAVE_LAPACK,1,[Define if you have LAPACK library.]),[$1])
|
|
+ :
|
|
+else
|
|
+ acx_lapack_ok=no
|
|
+ $2
|
|
+fi
|
|
+])dnl ACX_LAPACK
|
|
diff --git a/configure.ac b/configure.ac
|
|
new file mode 100644
|
|
--- /dev/null
|
|
+++ b/configure.ac
|
|
@@ -0,0 +1,92 @@
|
|
+AC_PREREQ([2.68])
|
|
+AC_INIT([SPQR],[1.2.2],[davis@cise.ufl.edu])
|
|
+AC_CONFIG_SRCDIR([Source/spqr_kernel.cpp])
|
|
+AC_CONFIG_HEADER([config.h])
|
|
+AM_INIT_AUTOMAKE([foreign])
|
|
+LT_INIT
|
|
+
|
|
+AC_PROG_INSTALL
|
|
+AC_PROG_F77
|
|
+AC_PROG_CC
|
|
+AC_PROG_CXX
|
|
+
|
|
+AC_MSG_CHECKING([whether to use the CHOLMOD Partition module])
|
|
+AC_ARG_WITH([cholmod-partition],
|
|
+ [AS_HELP_STRING(
|
|
+ [--with-cholmod-partition],
|
|
+ [Use METIS in the CHOLMOD partition module for partitioning @<:@default=yes@:>@])],
|
|
+ [with_cholmod_partition=$withval],
|
|
+ [with_cholmod_partition="yes"])
|
|
+AC_MSG_RESULT([$with_cholmod_partition])
|
|
+
|
|
+AC_MSG_CHECKING([whether to use tbb])
|
|
+AC_ARG_WITH([tbb],
|
|
+ [AS_HELP_STRING(
|
|
+ [--with-tbb],
|
|
+ [Use Intel Threading Building Blocks for multithreading @<:@default=yes@:>@])],
|
|
+ [with_tbb=$withval],
|
|
+ [with_tbb="yes"])
|
|
+AC_MSG_RESULT([$with_tbb])
|
|
+
|
|
+if test "x$with_cholmod_partition" = "xno"; then
|
|
+ AC_DEFINE([NPARTITION], [], [Define if CHOLMOD was compiled without the Partition module])
|
|
+ AC_SUBST([SPQR_NPARTITION], ["-DNPARTITION"])
|
|
+fi
|
|
+
|
|
+if test "x$with_tbb" = "xyes"; then
|
|
+ AC_DEFINE([HAVE_TBB], [], [Define to compile with Threading Building Blocks])
|
|
+ AC_SUBST([SPQR_HAVE_TBB], ["-DHAVE_TBB"])
|
|
+fi
|
|
+
|
|
+LIBS_SAVED=$LIBS
|
|
+
|
|
+AC_CHECK_LIB([m], [sqrt])
|
|
+
|
|
+AC_CHECK_HEADERS([float.h stdlib.h sys/time.h])
|
|
+
|
|
+sinclude([acx_blas.m4])
|
|
+sinclude([acx_lapack.m4])
|
|
+ACX_LAPACK
|
|
+
|
|
+if test "x$BLAS_LIBS" = "x"; then
|
|
+ AC_MSG_ERROR([cannot find blas])
|
|
+fi
|
|
+
|
|
+if test "x$LAPACK_LIBS" = "x"; then
|
|
+ AC_MSG_ERROR([cannot find lapack])
|
|
+fi
|
|
+
|
|
+PKG_PROG_PKG_CONFIG
|
|
+PKG_CHECK_MODULES([UFCONFIG],[ufconfig],
|
|
+ [],
|
|
+ [AC_MSG_ERROR([cannot find ufconfig])])
|
|
+PKG_CHECK_MODULES([CHOLMOD],[cholmod],
|
|
+ [],
|
|
+ [AC_MSG_ERROR([cannot find cholmod])])
|
|
+
|
|
+if test "x$with_tbb" = "xyes"; then
|
|
+ AC_CHECK_HEADERS([tbb/task.h])
|
|
+ AC_SUBST([TBB_CFLAGS], [""])
|
|
+ AC_SUBST([TBB_LIBS], ["-ltbb"])
|
|
+fi
|
|
+
|
|
+AC_HEADER_STDBOOL
|
|
+AC_C_INLINE
|
|
+AC_TYPE_SIZE_T
|
|
+
|
|
+AC_CHECK_FUNCS([clock_gettime sqrt])
|
|
+
|
|
+LIBS=$LIBS_SAVED
|
|
+
|
|
+AM_CONDITIONAL([CHOLMOD_PARTITION], [test "x$with_cholmod_partition" = "xyes"])
|
|
+AM_CONDITIONAL([WITH_TBB], [test "x$with_tbb" = "xyes"])
|
|
+
|
|
+AC_CONFIG_FILES([
|
|
+ spqr.pc
|
|
+ Makefile
|
|
+ Demo/Makefile
|
|
+ Doc/Makefile
|
|
+ Include/Makefile
|
|
+ Matrix/Makefile
|
|
+ Source/Makefile])
|
|
+AC_OUTPUT
|
|
diff --git a/spqr.pc.in b/spqr.pc.in
|
|
new file mode 100644
|
|
--- /dev/null
|
|
+++ b/spqr.pc.in
|
|
@@ -0,0 +1,12 @@
|
|
+prefix=@prefix@
|
|
+exec_prefix=@exec_prefix@
|
|
+libdir=@libdir@
|
|
+includedir=@includedir@
|
|
+
|
|
+Name: @PACKAGE_NAME@
|
|
+Description: Multifrontal sparse QR factorization
|
|
+Version: @PACKAGE_VERSION@
|
|
+Requires.private: cholmod ufconfig
|
|
+Libs: -L${libdir} -lspqr
|
|
+Libs.private: @TBB_LIBS@ @LAPACK_LIBS@ @BLAS_LIBS@ -lm
|
|
+Cflags: -I${includedir}/spqr
|