slackbuilds_ponce/academic/jellyfish_k-mer/slack-desc
Petar Petrov 207b4e9661 academic/jellyfish_k-mer: Added (k-mers counting tools).
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2018-12-25 05:33:47 +07:00

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jellyfish_k-mer: jellyfish_k-mer (A tool for counting of k-mers in DNA)
jellyfish_k-mer:
jellyfish_k-mer: Jellyfish is a tool for fast, memory-efficient counting of k-mers
jellyfish_k-mer: in DNA. A k-mer is a substring of length k, and counting the
jellyfish_k-mer: occurrences of all such substrings is a central step in many
jellyfish_k-mer: analyses of DNA sequence. Jellyfish can count k-mers quickly by
jellyfish_k-mer: using an efficient encoding of a hash table and by exploiting the
jellyfish_k-mer: "compare-and-swap" CPU instruction to increase parallelism.
jellyfish_k-mer:
jellyfish_k-mer: Home: http://www.genome.umd.edu/jellyfish.html
jellyfish_k-mer: