mirror of
https://github.com/Ponce/slackbuilds
synced 2024-12-01 01:00:03 +01:00
11 lines
594 B
Text
11 lines
594 B
Text
Burrows-Wheeler Aligner (BWA) is an efficient program that aligns
|
|
relatively short nucleotide sequences against a long reference
|
|
sequence such as the human genome. It implements two algorithms, bwa-
|
|
short and BWA-SW. The former works for query sequences shorter than
|
|
200bp and the latter for longer sequences up to around 100kbp. Both
|
|
algorithms do gapped alignment. They are usually more accurate and
|
|
faster on queries with low error rates.
|
|
|
|
If you use BWA-SW, please cite:
|
|
Li H. and Durbin R. (2010) Fast and accurate long-read alignment with
|
|
Burrows-Wheeler Transform. Bioinformatics, Epub.
|