mirror of
https://github.com/Ponce/slackbuilds
synced 2024-11-22 19:44:21 +01:00
4457fbfa3e
Signed-off-by: David Spencer <idlemoor@slackbuilds.org> |
||
---|---|---|
.. | ||
pysam.info | ||
pysam.SlackBuild | ||
README | ||
slack-desc |
Pysam is a python module for reading and manipulating files in the SAM/BAM format. The SAM/BAM format is a way to store efficiently large numbers of alignments (Li 2009), such as those routinely created by next-generation sequencing methods. Pysam is a lightweight wrapper of the samtools_ C-API. Pysam also includes an interface for tabix. Reference: Li et al. Bioinformatics. 2009 Aug 15;25(16):2078-9. doi: 10.1093/bioinformatics/btp352. The Sequence Alignment/Map format and SAMtools.