slackbuilds_ponce/academic/ImageJ/ImageJ.SlackBuild
Petar Petrov 64ae6500e3 academic/ImageJ: Added (Image processing and analysis in Java)
Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
2012-04-08 11:01:48 -04:00

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#!/bin/sh
# Slackware build script for ImageJ
# Copyright 2012 Petar Petrov, ppetrov@paju.oulu.fi
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
# permitted provided that the following conditions are met:
#
# 1. Redistributions of this script must retain the above copyright
# notice, this list of conditions and the following disclaimer.
#
# THIS SOFTWARE IS PROVIDED BY THE AUTHOR "AS IS" AND ANY EXPRESS OR IMPLIED
# WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF
# MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO
# EVENT SHALL THE AUTHOR BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
# SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
# PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
# OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
# WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
PRGNAM=ImageJ
VERSION=${VERSION:-1.45}
ARCH=noarch
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
SRCNAM=ij
SRCVER=145
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
set -e
rm -rf $PKG
mkdir -p $TMP $PKG $OUTPUT
cd $TMP
rm -rf $PRGNAM
unzip $CWD/${SRCNAM}${SRCVER}.zip
cd $PRGNAM
unzip $CWD/ucsd-plugins.zip
chown -R root:root .
find . \
\( -perm 777 -o -perm 775 -o -perm 711 -o -perm 555 -o -perm 511 \) \
-exec chmod 755 {} \; -o \
\( -perm 666 -o -perm 664 -o -perm 600 -o -perm 444 -o -perm 440 -o -perm 400 \) \
-exec chmod 644 {} \;
mkdir -p $PKG/usr/share/$PRGNAM
cp -a luts macros plugins ij.jar $PKG/usr/share/$PRGNAM
# Install bio-formats plugins
mkdir -p $PKG/usr/share/$PRGNAM/plugins/LOCI
cp -a $CWD/loci_tools.jar $PKG/usr/share/$PRGNAM/plugins/LOCI
# Install UCSD confocal microscopy plugins
cp -a UCSD\ Plugins $PKG/usr/share/$PRGNAM/plugins/
mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION
cp -a README.html $PKG/usr/doc/$PRGNAM-$VERSION
cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild
# Fix permissions
find $PKG -type d -exec chmod 755 {} \; -o \
-type f -exec chmod 644 {} \;
# Install wrapper of ij.jar
install -D -m755 $CWD/imagej $PKG/usr/bin/imagej
mkdir -p $PKG/usr/share/{applications,pixmaps}
cp $CWD/imagej.desktop $PKG/usr/share/applications
cp $CWD/imagej.png $PKG/usr/share/pixmaps
mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cat $CWD/doinst.sh > $PKG/install/doinst.sh
cd $PKG
/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}