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t_coffee.SlackBuild |
T-Coffee is a multiple sequence alignment package. You can use T-Coffee to align sequences or to combine the output of your favorite alignment methods (Clustal, Mafft, Probcons, Muscle...) into one unique alignment (M-Coffee). T-Coffee can align Protein, DNA and RNA sequences. It is also able to combine sequence information with protein structural information 3D-Coffee/Expresso), profile information (PSI-Coffee) or RNA secondary structures (R-Coffee). examples are installed in /usr/share/t_coffee/ For detailed information and citation: T-Coffee: A novel method for multiple sequence alignments. Notredame, Higgins,Heringa,JMB,302(205-217)2000