slackbuilds_ponce/academic/cap3
Matteo Bernardini a02964b7f2 academic/cap3: Note the need to download the tarballs manually.
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
2022-02-27 22:29:05 -06:00
..
cap3.info
cap3.SlackBuild All: Support $PRINT_PACKAGE_NAME env var 2021-07-17 21:55:09 +02:00
LICENSE
README academic/cap3: Note the need to download the tarballs manually. 2022-02-27 22:29:05 -06:00
References
slack-desc

CAP3: A DNA sequence assembly program.

CAP3 if the third generation of the CAP sequence assembly program. The
program has a capability to clip 5' and 3' low-quality regions
of reads.  It uses base quality values in computation of overlaps
between reads, construction of multiple sequence alignments of
reads, and generation of consensus sequences. The program also uses
forward-reverse constraints to correct assembly errors and link
contigs.

This just repackages the binaries provided from upstream.

If you use CAP3 in any published work, please cite:
Huang, X. and Madan, A. (1999) CAP3: A DNA sequence assembly program.
Genome Res., 9, 868-877.

*NOTE* you have to download the tarballs manually from a browser,
to read and accept the license.