slackbuilds_ponce/academic/bwa
Petar Petrov d73dde8e0b academic/bwa: Updated for version 0.7.12.
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2015-02-05 06:31:05 +07:00
..
bwa.info academic/bwa: Updated for version 0.7.12. 2015-02-05 06:31:05 +07:00
bwa.SlackBuild academic/bwa: Updated for version 0.7.12. 2015-02-05 06:31:05 +07:00
README
References
slack-desc academic/bwa: Updated for version 0.7.12. 2015-02-05 06:31:05 +07:00

Burrows-Wheeler Aligner (BWA) is an efficient program that aligns
relatively short nucleotide sequences against a long reference
sequence such as the human genome. It implements two algorithms, bwa-
short and BWA-SW. The former works for query sequences shorter than
200bp and the latter for longer sequences up to around 100kbp. Both
algorithms do gapped alignment. They are usually more accurate and
faster on queries with low error rates.

If you use BWA-SW, please cite:
Li H. and Durbin R. (2010) Fast and accurate long-read alignment with
Burrows-Wheeler Transform. Bioinformatics, Epub.