slackbuilds_ponce/academic/pysam
Rob van Nues b245f19fdd academic/pysam: Updated for version 0.15.2.
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
2019-01-18 23:39:54 +07:00
..
pysam.info academic/pysam: Updated for version 0.15.2. 2019-01-18 23:39:54 +07:00
pysam.SlackBuild academic/pysam: Updated for version 0.15.2. 2019-01-18 23:39:54 +07:00
README
slack-desc academic/pysam: Updated for version 0.14.1. 2018-05-19 00:45:03 +01:00

Pysam is a python module for reading and manipulating files in the
SAM/BAM format. The SAM/BAM format is a way to store efficiently large
numbers of alignments (Li 2009), such as those routinely created by
next-generation sequencing methods.

Pysam is a lightweight wrapper of the samtools_ C-API. Pysam also
includes an interface for tabix.

Reference: Li et al. Bioinformatics. 2009 Aug 15;25(16):2078-9.
doi: 10.1093/bioinformatics/btp352.
The Sequence Alignment/Map format and SAMtools.