mirror of
https://github.com/Ponce/slackbuilds
synced 2024-11-22 19:44:21 +01:00
69 lines
2.1 KiB
Text
69 lines
2.1 KiB
Text
setup.py
|
|
MANIFEST.txt
|
|
LICENCE.txt
|
|
README.txt
|
|
pyCRAC/tests/test.novo
|
|
pyCRAC/tests/test.sh
|
|
pyCRAC/tests/test_coordinates.txt
|
|
pyCRAC/tests/test.gtf
|
|
pyCRAC/tests/test_f.fastq
|
|
pyCRAC/tests/test_f.fastq.gz
|
|
pyCRAC/tests/test_f_dm.fastq
|
|
pyCRAC/tests/test_r.fastq
|
|
pyCRAC/tests/test_r.fastq.gz
|
|
pyCRAC/tests/test_r_dm.fastq
|
|
pyCRAC/tests/indexes.txt
|
|
pyCRAC/tests/barcodes.txt
|
|
pyCRAC/tests/genes.lis
|
|
pyCRAC/Classes/NGSFormatWriters.py
|
|
pyCRAC/Classes/NGSFormatReaders.py
|
|
pyCRAC/Classes/PairedReads.py
|
|
pyCRAC/Classes/Pileups.py
|
|
pyCRAC/Classes/Aligner.py
|
|
pyCRAC/Classes/Motifs.py
|
|
pyCRAC/Classes/Barcodes.py
|
|
pyCRAC/Classes/Coverage.py
|
|
pyCRAC/Classes/Exceptions.py
|
|
pyCRAC/Classes/FDR.py
|
|
pyCRAC/Classes/Clustering
|
|
pyCRAC/db/Saccharomyces_cerevisiae.EF2.59.1.0_chr_lengths.txt
|
|
pyCRAC/db/Saccharomyces_cerevisiae.EF2.59.1.0.fa
|
|
pyCRAC/db/Saccharomyces_cerevisiae.EF2.59.1.0.fa.tab
|
|
pyCRAC/db/Saccharomyces_cerevisiae.EF2.59.1.3.gtf
|
|
pyCRAC/kinetic_crac_pipeline/CRAC_pipeline_PE.py
|
|
pyCRAC/kinetic_crac_pipeline/CRAC_pipeline_PeakFinder.py
|
|
pyCRAC/kinetic_crac_pipeline/CRAC_pipeline_SE.py
|
|
pyCRAC/kinetic_crac_pipeline/TrimNucs.py
|
|
pyCRAC/scripts/pybed2GTF.py
|
|
pyCRAC/scripts/pyGTF2bed.py
|
|
pyCRaC/scripts/pyGTF2bedGraph.py
|
|
pyCRAC/scripts/pyGTF2sgr.py
|
|
pyCRAC/scripts/pyNormalizeIntervalLengths.py
|
|
pyCRAC/scripts/pyFastqDuplicateRemover.py
|
|
pyCRAC/scripts/pyFastqJoiner.py
|
|
pyCRAC/scripts/pyFastqSplitter.py
|
|
pyCRAC/scripts/pyGetGeneNamesFromGTF.py
|
|
pyCRAC/scripts/pySelectMotifsFromGTF.py
|
|
pyCRAC/scripts/pyGetGTFSources.py
|
|
pyCRAC/scripts/pyFilterGTF.py
|
|
pyCRAC/scripts/pyFasta2tab.py
|
|
pyCRAC/scripts/pyAlignment2Tab.py
|
|
pyCRAC/scripts/pyExtractLinesFromGTF.py
|
|
pyCRAC/scripts/pyCheckGTFfile.py
|
|
pyCRAC/scripts/pyCalculateChromosomeLengths.py
|
|
pyCRAC/pyClusterReads.py
|
|
pyCRAC/pyCalculateFDRs.py
|
|
pyCRAC/pyCalculateMutationFrequencies.py
|
|
pyCRAC/pyBinCollector.py
|
|
pyCRAC/pyMotif.py
|
|
pyCRAC/pyPileup.py
|
|
pyCRAC/pyReadAligner.py
|
|
pyCRAC/pyReadCounters.py
|
|
pyCRAC/pyBarcodeFilter.py
|
|
pyCRAC/Parsers/Blast.py
|
|
pyCRAC/Parsers/GTF2.py
|
|
pyCRAC/Parsers/Novoalign.py
|
|
pyCRAC/Parsers/ParseAlignments.py
|
|
pyCRAC/Parsers/SAM.py
|
|
pyCRAC/Parsers/fasta2dict.py
|
|
pyCRAC/Parsers/tab2dict.py
|