mirror of
https://github.com/Ponce/slackbuilds
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69 lines
2.1 KiB
Text
69 lines
2.1 KiB
Text
setup.py
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MANIFEST.txt
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LICENCE.txt
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README.txt
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pyCRAC/tests/test.novo
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pyCRAC/tests/test.sh
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pyCRAC/tests/test_coordinates.txt
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pyCRAC/tests/test.gtf
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pyCRAC/tests/test_f.fastq
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pyCRAC/tests/test_f.fastq.gz
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pyCRAC/tests/test_f_dm.fastq
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pyCRAC/tests/test_r.fastq
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pyCRAC/tests/test_r.fastq.gz
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pyCRAC/tests/test_r_dm.fastq
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pyCRAC/tests/indexes.txt
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pyCRAC/tests/barcodes.txt
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pyCRAC/tests/genes.lis
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pyCRAC/Classes/NGSFormatWriters.py
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pyCRAC/Classes/NGSFormatReaders.py
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pyCRAC/Classes/PairedReads.py
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pyCRAC/Classes/Pileups.py
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pyCRAC/Classes/Aligner.py
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pyCRAC/Classes/Motifs.py
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pyCRAC/Classes/Barcodes.py
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pyCRAC/Classes/Coverage.py
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pyCRAC/Classes/Exceptions.py
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pyCRAC/Classes/FDR.py
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pyCRAC/Classes/Clustering
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pyCRAC/db/Saccharomyces_cerevisiae.EF2.59.1.0_chr_lengths.txt
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pyCRAC/db/Saccharomyces_cerevisiae.EF2.59.1.0.fa
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pyCRAC/db/Saccharomyces_cerevisiae.EF2.59.1.0.fa.tab
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pyCRAC/db/Saccharomyces_cerevisiae.EF2.59.1.3.gtf
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pyCRAC/kinetic_crac_pipeline/CRAC_pipeline_PE.py
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pyCRAC/kinetic_crac_pipeline/CRAC_pipeline_PeakFinder.py
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pyCRAC/kinetic_crac_pipeline/CRAC_pipeline_SE.py
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pyCRAC/kinetic_crac_pipeline/TrimNucs.py
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pyCRAC/scripts/pybed2GTF.py
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pyCRAC/scripts/pyGTF2bed.py
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pyCRaC/scripts/pyGTF2bedGraph.py
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pyCRAC/scripts/pyGTF2sgr.py
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pyCRAC/scripts/pyNormalizeIntervalLengths.py
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pyCRAC/scripts/pyFastqDuplicateRemover.py
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pyCRAC/scripts/pyFastqJoiner.py
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pyCRAC/scripts/pyFastqSplitter.py
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pyCRAC/scripts/pyGetGeneNamesFromGTF.py
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pyCRAC/scripts/pySelectMotifsFromGTF.py
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pyCRAC/scripts/pyGetGTFSources.py
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pyCRAC/scripts/pyFilterGTF.py
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pyCRAC/scripts/pyFasta2tab.py
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pyCRAC/scripts/pyAlignment2Tab.py
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pyCRAC/scripts/pyExtractLinesFromGTF.py
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pyCRAC/scripts/pyCheckGTFfile.py
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pyCRAC/scripts/pyCalculateChromosomeLengths.py
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pyCRAC/pyClusterReads.py
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pyCRAC/pyCalculateFDRs.py
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pyCRAC/pyCalculateMutationFrequencies.py
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pyCRAC/pyBinCollector.py
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pyCRAC/pyMotif.py
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pyCRAC/pyPileup.py
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pyCRAC/pyReadAligner.py
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pyCRAC/pyReadCounters.py
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pyCRAC/pyBarcodeFilter.py
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pyCRAC/Parsers/Blast.py
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pyCRAC/Parsers/GTF2.py
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pyCRAC/Parsers/Novoalign.py
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pyCRAC/Parsers/ParseAlignments.py
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pyCRAC/Parsers/SAM.py
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pyCRAC/Parsers/fasta2dict.py
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pyCRAC/Parsers/tab2dict.py
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