Ryan P.C. McQuen 081514ca22 academic/glpk: Updated for version 4.55. ... Signed-off-by: Ryan P.C. McQuen <ryan.q@linux.com>		2015-04-12 10:07:04 +07:00
..
abntex
aline	academic/aline: Add option to change row length.	2015-04-11 18:20:35 +07:00
amd	academic/amd: Renamed and moved from libraries	2014-01-31 00:53:23 -06:00
amplicon
amplifx	academic/amplifx: Added (Manage, test and design your primers).	2014-01-29 23:21:17 -06:00
antiprism
archeopteryx	academic/archeopteryx: Updated for version 0.9901_beta.	2015-02-05 06:31:04 +07:00
aris
arka
armadillo	academic/armadillo: Added (C++ linear algebra library).	2015-02-28 11:16:30 +07:00
arpack
arpack-ng	academic/arpack-ng: Add OpenBLAS support.	2014-11-29 08:13:52 +07:00
artha
avogadro	academic/avogadro: Remove %README%.	2014-05-29 06:31:15 +07:00
bedtools	academic/bedtools: Updated for version 2.23.0.	2015-04-11 18:21:23 +07:00
biblesync	academic/biblesync: Added (Bible Software Navigation Library).	2015-04-03 20:50:28 +07:00
bibletime	academic/bibletime: Updated for version 2.10.1.	2015-03-28 02:22:09 +07:00
bibus	academic/bibus: Updated for version 1.5.2 + new maintainer.	2014-05-04 10:52:53 +07:00
bowtie	academic/bowtie: Fix DOWNLOAD link.	2014-10-03 10:16:48 +07:00
bowtie2
btf	academic/btf: Renamed and moved from libraries.	2014-01-31 00:53:58 -06:00
bwa	academic/bwa: Updated for version 0.7.12.	2015-02-05 06:31:05 +07:00
calc	academic/calc: Updated for 2.12.5.0.	2014-12-16 09:11:50 +07:00
calcoo
camd	academic/camd: Renamed and moved from libraries.	2014-01-31 00:53:28 -06:00
cap3
cblas
ccolamd	academic/ccolamd: Renamed and moved from libraries.	2014-01-31 00:53:38 -06:00
celestia
chemtool
cholmod	academic/cholmod: Remove %README%.	2014-05-29 06:31:15 +07:00
cistrome-CEAS
cistrome-MACS
cld2	academic/cld2: Fix md5sum.	2015-04-05 08:38:28 +07:00
clustalo	academic/clustalo: Updated for version 1.2.1.	2014-03-03 01:31:21 +07:00
clustalw
clustalx
colamd	academic/colamd: Renamed and moved from libraries.	2014-01-31 00:53:33 -06:00
convertall
copasi	academic/copasi: Updated for version 4.14.89.	2014-10-16 09:07:24 +07:00
coq
csparse	academic/csparse: Renamed and moved from libraries.	2014-01-31 00:53:47 -06:00
cufflinks	academic/cufflinks: Updated for version 2.2.1.	2014-05-26 08:23:45 +07:00
cutadapt	academic/cutadapt: Updated for version 1.8.1.	2015-04-11 18:22:46 +07:00
cxsparse	academic/cxsparse: Renamed and moved from libraries.	2014-01-31 00:53:43 -06:00
drawtiming	academic/drawtiming: Added (tool for drawing timing diagrams).	2014-06-22 11:18:20 +07:00
EMBASSY	academic/EMBASSY: Use self-hosted.	2014-07-20 19:02:33 +07:00
EMBOSS	academic/EMBOSS: Use self-hosted.	2014-07-20 19:03:16 +07:00
engauge	academic/engauge: Added (Graphs to Numbers Digitizer).	2014-06-12 06:51:38 +07:00
ent
equalx	academic/equalx: Added (equation editor).	2015-03-12 22:28:03 +07:00
ess
evopedia_qt	academic/evopedia_qt: Added (Offline Wikipedia viewer).	2014-04-07 14:43:45 +07:00
extrema	academic/extrema: New maintainer.	2014-06-21 01:22:49 +07:00
fann
fastqc	academic/fastqc: Updated for version 0.11.3.	2015-04-11 18:23:57 +07:00
fet	academic/fet: Updated for version 5.26.2.	2015-04-07 19:57:02 +07:00
finchtv	academic/finchtv: Added (Brilliant Trace Viewer).	2015-04-11 22:39:24 +07:00
flann
flashqard
free42	academic/free42: Fix MD5SUM.	2014-08-17 18:23:48 +07:00
freechartgeany
g3data
galculator	academic/galculator: Updated for version 2.1.3 + new maintainer.	2014-07-05 08:10:50 +07:00
gaw3	academic/gaw3: Added (A Free Gtk Analog Wave viewer).	2014-05-28 23:45:50 +07:00
Gblocks
gcalctool
gchemutils	academic/gchemutils: Updated for version 0.14.10.	2015-02-05 06:31:05 +07:00
gcompris	academic/gcompris: Updated for version 15.02.	2015-02-24 16:56:34 +07:00
geda-gaf
gelemental
geneconv	academic/geneconv: Use cp instead of cp -a.	2014-07-20 18:36:51 +07:00
genius
genometools	academic/genometools: Updated for version 1.5.5.	2015-04-11 18:24:41 +07:00
genpak
GeoGebra	academic/GeoGebra: Updated for version 5.0.80.0.	2015-03-28 02:22:08 +07:00
geomview
gerbv
ggobi
ghemical
glpk	academic/glpk: Updated for version 4.55.	2015-04-12 10:07:04 +07:00
gnucap	academic/gnucap: Added (A modern analog and mixed signal circuit simulator)	2014-06-11 08:17:59 -05:00
gp2fasta
gpredict
grace
gresistor
gretl	academic/gretl: Updated for version 1.9.92.	2014-10-04 23:51:21 +07:00
grpn
gspiceui	academic/gspiceui: Added (A GUI for Ng-Spice and GNUcap).	2014-06-12 06:51:48 +07:00
gtkwave
gtypist	academic/gtypist: Update desktop file.	2014-11-02 08:27:44 +07:00
gwyddion	academic/gwyddion: Updated for version 2.40.	2015-02-09 00:14:57 +07:00
ij-plugins-LOCI	academic/ij-plugins-LOCI: Updated for version 5.1.0.	2015-04-11 18:25:31 +07:00
ij-plugins-UCSD
ImageJ	academic/ImageJ: Updated for version 1.48.	2014-05-26 08:20:39 +07:00
io_lib	academic/io_lib: Updated for version 1.13.7, moved to academic.	2014-07-20 18:51:10 +07:00
isoelectric-point
iTest	academic/iTest: Added (computer-based tests software).	2014-05-04 22:27:22 +07:00
itex2mml	academic/itex2mml: Fix MD5SUM.	2014-08-17 18:24:42 +07:00
jalview	academic/jalview: Updated for version 2.8.2.	2015-02-05 06:31:06 +07:00
jpicedt
jugglinglab	academic/jugglinglab: Updated for version 0.6.2.	2014-08-19 16:39:24 +07:00
kile
klu	academic/klu: Remove %README%.	2014-05-29 06:31:15 +07:00
knime	academic/knime: Fix checksum.	2014-06-18 16:19:00 -05:00
Kst	academic/Kst: Added (KDE4 Plotting Tool).	2014-12-12 14:19:06 +07:00
ktikz	academic/ktikz: Update HOMEPAGE and DOWNLOAD.	2014-08-19 16:39:19 +07:00
labplot2	academic/labplot2: Added (graph and scientific data analaysis).	2014-12-13 01:47:39 +07:00
ladr
lalnview
lapack95
ldl	academic/ldl: Remove %README%.	2014-05-29 06:31:16 +07:00
libghemical
link-grammar
lpsolve	academic/lpsolve: Added (linear pogramming solver).	2014-10-11 00:14:13 +07:00
mafft	academic/mafft: Updated for version 7.220.	2015-04-11 18:26:14 +07:00
mathomatic
maxima	academic/maxima: Updated for 5.35.1.	2014-12-16 09:21:58 +07:00
mendeleydesktop	academic/mendeleydesktop: Updated for version 1.12.4.	2014-12-16 16:22:31 +07:00
metis	academic/metis: Build static library.	2014-10-23 14:44:35 +07:00
mkDSSP
Mnemosyne	academic/Mnemosyne: Updated for version 2.3.2.	2015-03-15 07:34:46 +07:00
mrbayes	academic/mrbayes: Updated for version 3.2.4.	2015-02-05 06:31:07 +07:00
muscle
ncbi-blast
ncbi-blast-plus	academic/ncbi-blast-plus: Updated for version 2.2.30.	2015-02-05 06:31:07 +07:00
ngspice	academic/ngspice: Updated for version 26 + new maintainer.	2014-07-28 11:10:32 +07:00
octave	academic/octave: Add workarounds for documentation browser bugs.	2014-12-13 10:35:41 +07:00
omlibraries	academic/omlibraries: Updated for version svn20150410.	2015-04-11 22:41:11 +07:00
opengrads
openmodelica	academic/openmodelica: Updated for version svn25500.	2015-04-11 22:40:29 +07:00
paml	academic/paml: Fixed CHECKSUM.	2015-04-11 18:27:02 +07:00
pamlX	academic/pamlX: Updated for version 1.3.1.	2015-04-11 18:27:43 +07:00
patsy	academic/patsy: Added (statistical models).	2015-02-14 15:46:11 +07:00
pcb
perlprimer	academic/perlprimer: Fixed syntax error.	2014-02-18 14:59:56 -06:00
PhyML
pianobooster	academic/pianobooster: Update .info.	2014-10-30 21:06:44 +07:00
plasmidomics
primer3
pspp	academic/pspp: Fixed deps.	2014-06-18 16:19:02 -05:00
PyAMG	academic/PyAMG: Added (Algebraic Multigrid Library).	2015-03-15 23:32:08 +07:00
pyfits
qhull	academic/qhull: New Maintainer.	2014-04-07 14:43:50 +07:00
qrupdate	academic/qrupdate: Fix doc permission.	2015-01-01 15:58:08 +07:00
QtiPlot	academic/QtiPlot: Update HOMEPAGE and DOWNLOAD url.	2014-04-23 07:52:07 +07:00
qtoctave
qucs	academic/qucs: Updated for version 0.0.18.	2014-11-28 09:09:56 +07:00
R	academic/R: Updated for version 3.1.2.	2014-11-02 12:12:27 +07:00
rbio	academic/rbio: Renamed and moved from libraries.	2014-01-31 00:53:52 -06:00
root	academic/root: Remove %README%.	2014-05-29 06:31:16 +07:00
sage	academic/sage: Updated for version 6.5.	2015-02-19 18:22:48 +07:00
samtools
scilab	academic/scilab: Updated for version 5.5.1.	2014-11-27 13:08:38 +07:00
scipy	academic/scipy: Updated for version 0.14.0.	2014-10-30 20:27:29 +07:00
seaview	academic/seaview: Updated for version 4.5.4.	2015-03-27 07:58:54 +07:00
sequence-analysis
slatec
smath-studio	academic/smath-studio: Updated for version 0.97.5346.	2014-11-27 13:10:04 +07:00
snpEff	academic/snpEff: Updated for version 4.1c.	2015-04-11 18:28:24 +07:00
solfege
spades	academic/spades: Added (SPAdes Genome Assembler).	2015-03-27 15:27:52 +07:00
spatialite-tools	academic/spatialite-tools: Updated for version 4.2.0.	2015-03-15 09:15:19 +07:00
spatialite_gui	academic/spatialite_gui: Removed APPROVED line.	2015-03-22 15:51:29 +07:00
speedcrunch	academic/speedcrunch: Updated for version 0.11.	2014-07-07 00:00:37 -05:00
spiceopus	academic/spiceopus: Added (circuit simulator).	2014-06-25 00:09:05 +07:00
spidey	academic/spidey: Added x86_64 source.	2015-02-05 06:31:08 +07:00
spqr	academic/spqr: Renamed and moved from libraries.	2014-01-31 00:54:22 -06:00
squizz	academic/squizz: Fix MD5SUM.	2015-03-16 01:32:30 +07:00
staden	academic/staden: Fix build against tklib 0.6.	2015-02-05 06:31:08 +07:00
stellarium	academic/stellarium: Updated for version 0.13.2.	2015-01-23 06:35:38 +07:00
suitesparse	academic/suiteparse: Updated README.	2014-02-08 11:10:07 -06:00
suitesparseconfig	academic/suitesparseconfig: Renamed and moved from libraries.	2014-01-31 00:53:18 -06:00
sundials	academic/sundial: Fix library installation.	2014-11-27 00:52:01 +07:00
sword	academic/sword: Updated for version 1.7.4.	2015-03-28 02:22:09 +07:00
sword-data-kjv	academic/sword-data-kjv: Added (King James Version Bible).	2015-03-28 02:22:08 +07:00
sympy	academic/sympy: Updated for version 0.7.5.	2014-10-30 20:27:28 +07:00
t_coffee	academic/t_coffee: Updated for version 11.00.8cbe486.	2014-10-03 10:16:52 +07:00
tabix
TauDEM	academic/TauDEM: Updated for version 5.2.0.	2015-03-16 00:09:22 +07:00
tilem
tilem2
tkgate	academic/tkgate: Added (An event driven digital circuit simulator).	2014-06-21 19:28:03 +07:00
topdraw
tophat	academic/tophat: Updated for version 2.0.14.	2015-04-11 18:29:02 +07:00
treeview
tuxmath
tuxtype2
ucsc-blat
ugene	academic/ugene: Updated for version 1.16.1.	2015-03-27 15:28:40 +07:00
umfpack	academic/umfpack: Renamed and moved from libraries.	2014-01-31 00:54:12 -06:00
units	academic/units: Updated for version 2.11.	2015-01-06 23:02:47 +07:00
vcftools	academic/vcftools: Updated for version 0.1.12b.	2015-02-05 06:31:09 +07:00
verilog
veusz	academic/veusz: Added (Scientific Plotting).	2014-12-05 04:53:12 +07:00
WordNet
wxmacmolplt
wxMaxima
xcircuit
xephem
xiphos	academic/xiphos: Fix source.	2015-04-07 21:25:23 +07:00
xoscope	academic/xoscope: Updated for version 2.1.	2015-02-21 09:03:58 +07:00
zotero	academic/zotero: Updated for version 4.0.26.3.	2015-04-11 18:29:41 +07:00