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23 lines
1.2 KiB
Text
The Biopython Project is an international association of developers of
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freely available Python tools for computational molecular biology.
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The Biopython web site provides an online resource for modules,
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scripts, and web links for developers of Python-based software for
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bioinformatics use and research. Basically, the goal of Biopython is
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to make it as easy as possible to use Python for bioinformatics by
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creating high-quality, reusable modules and classes. Biopython
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features include parsers for various Bioinformatics file formats
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(BLAST, Clustalw, FASTA, Genbank,...), access to online services
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(NCBI, Expasy,...), interfaces to common and not-so-common programs
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(Clustalw, DSSP, MSMS,...), a standard sequence class, various
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clustering modules, a KD tree data structure etc. and even
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documentation.
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If you use Biopython in work contributing to a scientific publication,
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please cite the application note (below) or one of the module specific
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publications (listed on Biopython's website):
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Cock, P.J.A. et al. Biopython: freely available Python tools for
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computational molecular biology and bioinformatics. Bioinformatics
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2009 Jun 1; 25(11) 1422-3
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http://dx.doi.org/10.1093/bioinformatics/btp163 pmid:19304878
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