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academic/clustalo: Updated for version 1.2.3.

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Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
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Petar Petrov 2016-11-26 21:29:06 +00:00 committed by Willy Sudiarto Raharjo
parent f2afa5c89c
commit f91764fcf2
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GPG key ID: 887B8374D7333381
4 changed files with 9 additions and 9 deletions
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2
academic/clustalo/README
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@ -13,7 +13,7 @@ independent programs provide an easy to use GUI:
If you like Clustal-Omega please cite:
Sievers F, Wilm A, Dineen D, Gibson TJ, Karplus K, Li W, Lopez R,
McWilliam H, Remmert M, Soding J, Thompson JD, Higgins DG.
McWilliam H, Remmert M, Söding J, Thompson JD, Higgins DG.
Fast, scalable generation of high-quality protein multiple sequence
alignments using Clustal Omega. Mol Syst Biol. 2011 Oct 11;7:539. doi:
10.1038/msb.2011.75. PMID: 21988835.

8
academic/clustalo/clustalo.SlackBuild
View file

@ -23,7 +23,7 @@
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
PRGNAM=clustalo
VERSION=${VERSION:-1.2.1}
VERSION=${VERSION:-1.2.3}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
@ -31,7 +31,7 @@ SRCNAM=clustal-omega
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
i?86) ARCH=i486 ;;
i?86) ARCH=i586 ;;
arm*) ARCH=arm ;;
*) ARCH=$( uname -m ) ;;
esac
@ -42,8 +42,8 @@ TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
if [ "$ARCH" = "i486" ]; then
SLKCFLAGS="-O2 -march=i486 -mtune=i686"
if [ "$ARCH" = "i586" ]; then
SLKCFLAGS="-O2 -march=i586 -mtune=i686"
LIBDIRSUFFIX=""
elif [ "$ARCH" = "i686" ]; then
SLKCFLAGS="-O2 -march=i686 -mtune=i686"

6
academic/clustalo/clustalo.info
View file

@ -1,8 +1,8 @@
PRGNAM="clustalo"
VERSION="1.2.1"
VERSION="1.2.3"
HOMEPAGE="http://www.clustal.org/omega/"
DOWNLOAD="http://www.clustal.org/omega/clustal-omega-1.2.1.tar.gz"
MD5SUM="7ea360ef0c615d3a07c872e2345df3e1"
DOWNLOAD="http://www.clustal.org/omega/clustal-omega-1.2.3.tar.gz"
MD5SUM="f92f6ddbc32afc8a8b3026de7f4e15d4"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES="argtable"

2
academic/clustalo/slack-desc
View file

@ -15,5 +15,5 @@ clustalo: versions, allowing hundreds of thousands of sequences to be
clustalo: aligned in only a few hours.
clustalo:
clustalo: Home: http://www.clustal.org/omega/
clustalo: References: /usr/doc/clustalo-1.2.1/References
clustalo: References: /usr/doc/clustalo-1.2.3/References
clustalo: