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academic/ugene: Updated for version 48.1.

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Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com>

Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
This commit is contained in:
Petar Petrov 2023-09-10 21:23:07 +09:00 committed by Willy Sudiarto Raharjo
parent 3cd21afae3
commit e53b8b3d71
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GPG key ID: 3F617144D7238786
3 changed files with 7 additions and 4 deletions
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3
academic/ugene/README
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@ -43,8 +43,10 @@ program. All of them are available at SlackBuilds.org:
- cufflinks (A reference-guided assembler for RNA-Seq experiments)
- cutadapt (Trim adapters from high-throughput sequencing reads)
- fastqc (A quality control tool for high throughput sequence data)
- FastTree (Infers approximately-ML phylogenetic trees)
- HMMER (Biosequence analysis using profile hidden Markov models)
- iqtree (Efficient and versatile phylogenomic software by ML)
- kalign (A fast multiple sequence alignment program)
- MetaPhlAn2 (Metagenomic Phylogenetic Analysis)
- mafft (A multiple sequence alignment program)
- mrbayes (MrBayes: Bayesian Inference of Phylogeny)
@ -54,6 +56,7 @@ program. All of them are available at SlackBuilds.org:
- snpEff (Genetic variant annotation and effect prediction toolbox)
- spades (SPAdes Genome Assembler)
- spidey (mRNA-to-genomic alignment)
- stringtie (Assembler of RNA-Seq alignments)
- t_coffee (A multiple sequence alignment program)
- tabix-legacy (Generic indexer for TAB-delimited genome position files)
- tophat (Splice junction mapper for RNA-Seq reads)

2
academic/ugene/ugene.SlackBuild
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@ -25,7 +25,7 @@
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=ugene
VERSION=${VERSION:-47.0}
VERSION=${VERSION:-48.1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
PKGTYPE=${PKGTYPE:-tgz}

6
academic/ugene/ugene.info
View file

@ -1,10 +1,10 @@
PRGNAM="ugene"
VERSION="47.0"
VERSION="48.1"
HOMEPAGE="http://ugene.net/"
DOWNLOAD="UNSUPPORTED"
MD5SUM=""
DOWNLOAD_x86_64="https://github.com/ugeneunipro/ugene/archive/47.0/ugene-47.0.tar.gz"
MD5SUM_x86_64="abcfd6602f5b2741ee45ff566ef17125"
DOWNLOAD_x86_64="https://github.com/ugeneunipro/ugene/archive/48.1/ugene-48.1.tar.gz"
MD5SUM_x86_64="5662a9e58d6ad19a8be7410f12139072"
REQUIRES=""
MAINTAINER="Petar Petrov"
EMAIL="slackalaxy@gmail.com"