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academic/octave: Updated for version 3.8.2.

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Signed-off-by: Kyle Guinn <elyk03@gmail.com>
This commit is contained in:
Kyle Guinn 2014-11-26 02:04:18 -06:00 committed by Willy Sudiarto Raharjo
parent 6cc6146547
commit adcce8001d
4 changed files with 267 additions and 16 deletions
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10
academic/octave/README
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@ -4,6 +4,16 @@ linear and nonlinear problems numerically, and for performing other numerical
experiments using a language that is mostly compatible with Matlab. It may
also be used as a batch-oriented language.
This requires a BLAS/LAPACK implementation. Choose one of these package sets:
* OpenBLAS (includes a LAPACK implementation)
* atlas, lapack-atlas
* blas, lapack (the Netlib reference implementations)
If more than one set is installed (assuming there are no packaging conflicts)
then the auto-detection will use the first implementation from this list that
it finds. If in doubt, choose the Netlib reference implementations; other
packages that require a BLAS or LAPACK implementation may not build if they
are not configured to detect/use alternate implementations.
These optional dependencies will be used if found (see INSTALL.OCTAVE, in the
Octave source, for a description of what each dependency offers):
amd, camd, colamd, ccolamd, cholmod, umfpack, cxsparse, glpk, arpack-ng,

27
academic/octave/octave.SlackBuild
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@ -9,21 +9,21 @@
# permitted provided that the following conditions are met:
#
# 1. Redistributions of this script must retain the above copyright
# notice, this list of conditions and the following disclaimer.
# notice, this list of conditions and the following disclaimer.
#
# THIS SOFTWARE IS PROVIDED BY THE AUTHOR "AS IS" AND ANY EXPRESS OR IMPLIED
# WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF
# MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO
# EVENT SHALL THE AUTHOR BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
# SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
# PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
# OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
# WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
# THIS SOFTWARE IS PROVIDED BY THE AUTHOR "AS IS" AND ANY EXPRESS OR IMPLIED
# WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF
# MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO
# EVENT SHALL THE AUTHOR BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
# SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
# PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
# OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
# WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
PRGNAM=octave
VERSION=${VERSION:-3.8.1}
VERSION=${VERSION:-3.8.2}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
@ -74,6 +74,9 @@ cd $PRGNAM-$VERSION
chown -R root:root .
chmod -R u+w,go-w,a+rX-st .
# Auto-detect OpenBLAS.
cat $CWD/patches/ax_blas.m4 > m4/ax_blas.m4
# Don't try to detect Qt5. It's not supported yet.
# https://savannah.gnu.org/bugs/?40252
patch -p1 < $CWD/patches/no-qt5.diff

8
academic/octave/octave.info
View file

@ -1,10 +1,10 @@
PRGNAM="octave"
VERSION="3.8.1"
VERSION="3.8.2"
HOMEPAGE="https://www.gnu.org/software/octave/"
DOWNLOAD="ftp://ftp.gnu.org/gnu/octave/octave-3.8.1.tar.bz2"
MD5SUM="4c5b9bd6b82b7fa3191af9706e7204f8"
DOWNLOAD="ftp://ftp.gnu.org/gnu/octave/octave-3.8.2.tar.bz2"
MD5SUM="188bd97e22054f9c62701ee0e6800dc1"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES="%README% lapack"
REQUIRES="%README% blas lapack"
MAINTAINER="Kyle Guinn"
EMAIL="elyk03@gmail.com"

238
academic/octave/patches/ax_blas.m4 Normal file
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@ -0,0 +1,238 @@
# ===========================================================================
# http://www.gnu.org/software/autoconf-archive/ax_blas.html
# ===========================================================================
#
# SYNOPSIS
#
# AX_BLAS([ACTION-IF-FOUND[, ACTION-IF-NOT-FOUND]])
#
# DESCRIPTION
#
# This macro looks for a library that implements the BLAS linear-algebra
# interface (see http://www.netlib.org/blas/). On success, it sets the
# BLAS_LIBS output variable to hold the requisite library linkages.
#
# To link with BLAS, you should link with:
#
# $BLAS_LIBS $LIBS $FLIBS
#
# in that order. FLIBS is the output variable of the
# AC_F77_LIBRARY_LDFLAGS macro (called if necessary by AX_BLAS), and is
# sometimes necessary in order to link with F77 libraries. Users will also
# need to use AC_F77_DUMMY_MAIN (see the autoconf manual), for the same
# reason.
#
# Many libraries are searched for, from ATLAS to CXML to ESSL. The user
# may also use --with-blas=<lib> in order to use some specific BLAS
# library <lib>. In order to link successfully, however, be aware that you
# will probably need to use the same Fortran compiler (which can be set
# via the F77 env. var.) as was used to compile the BLAS library.
#
# ACTION-IF-FOUND is a list of shell commands to run if a BLAS library is
# found, and ACTION-IF-NOT-FOUND is a list of commands to run it if it is
# not found. If ACTION-IF-FOUND is not specified, the default action will
# define HAVE_BLAS.
#
# LICENSE
#
# Copyright (c) 2008 Steven G. Johnson <stevenj@alum.mit.edu>
#
# This program is free software: you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by the
# Free Software Foundation, either version 3 of the License, or (at your
# option) any later version.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General
# Public License for more details.
#
# You should have received a copy of the GNU General Public License along
# with this program. If not, see <http://www.gnu.org/licenses/>.
#
# As a special exception, the respective Autoconf Macro's copyright owner
# gives unlimited permission to copy, distribute and modify the configure
# scripts that are the output of Autoconf when processing the Macro. You
# need not follow the terms of the GNU General Public License when using
# or distributing such scripts, even though portions of the text of the
# Macro appear in them. The GNU General Public License (GPL) does govern
# all other use of the material that constitutes the Autoconf Macro.
#
# This special exception to the GPL applies to versions of the Autoconf
# Macro released by the Autoconf Archive. When you make and distribute a
# modified version of the Autoconf Macro, you may extend this special
# exception to the GPL to apply to your modified version as well.
#serial 14
AU_ALIAS([ACX_BLAS], [AX_BLAS])
AC_DEFUN([AX_BLAS], [
AC_PREREQ(2.50)
AC_REQUIRE([AC_F77_LIBRARY_LDFLAGS])
AC_REQUIRE([AC_CANONICAL_HOST])
ax_blas_ok=no
AC_ARG_WITH(blas,
[AS_HELP_STRING([--with-blas=<lib>], [use BLAS library <lib>])])
case $with_blas in
yes | "") ;;
no) ax_blas_ok=disable ;;
-* | */* | *.a | *.so | *.so.* | *.o) BLAS_LIBS="$with_blas" ;;
*) BLAS_LIBS="-l$with_blas" ;;
esac
# Get fortran linker names of BLAS functions to check for.
AC_F77_FUNC(sgemm)
AC_F77_FUNC(dgemm)
ax_blas_save_LIBS="$LIBS"
LIBS="$LIBS $FLIBS"
# First, check BLAS_LIBS environment variable
if test $ax_blas_ok = no; then
if test "x$BLAS_LIBS" != x; then
save_LIBS="$LIBS"; LIBS="$BLAS_LIBS $LIBS"
AC_MSG_CHECKING([for $sgemm in $BLAS_LIBS])
AC_TRY_LINK_FUNC($sgemm, [ax_blas_ok=yes], [BLAS_LIBS=""])
AC_MSG_RESULT($ax_blas_ok)
LIBS="$save_LIBS"
fi
fi
# BLAS linked to by default? (happens on some supercomputers)
if test $ax_blas_ok = no; then
save_LIBS="$LIBS"; LIBS="$LIBS"
AC_MSG_CHECKING([if $sgemm is being linked in already])
AC_TRY_LINK_FUNC($sgemm, [ax_blas_ok=yes])
AC_MSG_RESULT($ax_blas_ok)
LIBS="$save_LIBS"
fi
# BLAS in OpenBLAS library? (http://xianyi.github.com/OpenBLAS/)
if test $ax_blas_ok = no; then
AC_CHECK_LIB(openblas, $sgemm, [ax_blas_ok=yes
BLAS_LIBS="-lopenblas"])
fi
# BLAS in ATLAS library? (http://math-atlas.sourceforge.net/)
if test $ax_blas_ok = no; then
AC_CHECK_LIB(atlas, ATL_xerbla,
[AC_CHECK_LIB(f77blas, $sgemm,
[AC_CHECK_LIB(cblas, cblas_dgemm,
[ax_blas_ok=yes
BLAS_LIBS="-lcblas -lf77blas -latlas"],
[], [-lf77blas -latlas])],
[], [-latlas])])
fi
# BLAS in PhiPACK libraries? (requires generic BLAS lib, too)
if test $ax_blas_ok = no; then
AC_CHECK_LIB(blas, $sgemm,
[AC_CHECK_LIB(dgemm, $dgemm,
[AC_CHECK_LIB(sgemm, $sgemm,
[ax_blas_ok=yes; BLAS_LIBS="-lsgemm -ldgemm -lblas"],
[], [-lblas])],
[], [-lblas])])
fi
# BLAS in Intel MKL library?
if test $ax_blas_ok = no; then
# MKL for gfortran
if test x"$ac_cv_fc_compiler_gnu" = xyes; then
# 64 bit
if test $host_cpu = x86_64; then
AC_CHECK_LIB(mkl_gf_lp64, $sgemm,
[ax_blas_ok=yes;BLAS_LIBS="-lmkl_gf_lp64 -lmkl_sequential -lmkl_core -lpthread"],,
[-lmkl_gf_lp64 -lmkl_sequential -lmkl_core -lpthread])
# 32 bit
elif test $host_cpu = i686; then
AC_CHECK_LIB(mkl_gf, $sgemm,
[ax_blas_ok=yes;BLAS_LIBS="-lmkl_gf -lmkl_sequential -lmkl_core -lpthread"],,
[-lmkl_gf -lmkl_sequential -lmkl_core -lpthread])
fi
# MKL for other compilers (Intel, PGI, ...?)
else
# 64-bit
if test $host_cpu = x86_64; then
AC_CHECK_LIB(mkl_intel_lp64, $sgemm,
[ax_blas_ok=yes;BLAS_LIBS="-lmkl_intel_lp64 -lmkl_sequential -lmkl_core -lpthread"],,
[-lmkl_intel_lp64 -lmkl_sequential -lmkl_core -lpthread])
# 32-bit
elif test $host_cpu = i686; then
AC_CHECK_LIB(mkl_intel, $sgemm,
[ax_blas_ok=yes;BLAS_LIBS="-lmkl_intel -lmkl_sequential -lmkl_core -lpthread"],,
[-lmkl_intel -lmkl_sequential -lmkl_core -lpthread])
fi
fi
fi
# Old versions of MKL
if test $ax_blas_ok = no; then
AC_CHECK_LIB(mkl, $sgemm, [ax_blas_ok=yes;BLAS_LIBS="-lmkl -lguide -lpthread"],,[-lguide -lpthread])
fi
# BLAS in Apple vecLib library?
if test $ax_blas_ok = no; then
save_LIBS="$LIBS"; LIBS="-framework vecLib $LIBS"
AC_MSG_CHECKING([for $sgemm in -framework vecLib])
AC_TRY_LINK_FUNC($sgemm, [ax_blas_ok=yes;BLAS_LIBS="-framework vecLib"])
AC_MSG_RESULT($ax_blas_ok)
LIBS="$save_LIBS"
fi
# BLAS in Alpha CXML library?
if test $ax_blas_ok = no; then
AC_CHECK_LIB(cxml, $sgemm, [ax_blas_ok=yes;BLAS_LIBS="-lcxml"])
fi
# BLAS in Alpha DXML library? (now called CXML, see above)
if test $ax_blas_ok = no; then
AC_CHECK_LIB(dxml, $sgemm, [ax_blas_ok=yes;BLAS_LIBS="-ldxml"])
fi
# BLAS in Sun Performance library?
if test $ax_blas_ok = no; then
if test "x$GCC" != xyes; then # only works with Sun CC
AC_CHECK_LIB(sunmath, acosp,
[AC_CHECK_LIB(sunperf, $sgemm,
[BLAS_LIBS="-xlic_lib=sunperf -lsunmath"
ax_blas_ok=yes],[],[-lsunmath])])
fi
fi
# BLAS in SCSL library? (SGI/Cray Scientific Library)
if test $ax_blas_ok = no; then
AC_CHECK_LIB(scs, $sgemm, [ax_blas_ok=yes; BLAS_LIBS="-lscs"])
fi
# BLAS in SGIMATH library?
if test $ax_blas_ok = no; then
AC_CHECK_LIB(complib.sgimath, $sgemm,
[ax_blas_ok=yes; BLAS_LIBS="-lcomplib.sgimath"])
fi
# BLAS in IBM ESSL library? (requires generic BLAS lib, too)
if test $ax_blas_ok = no; then
AC_CHECK_LIB(blas, $sgemm,
[AC_CHECK_LIB(essl, $sgemm,
[ax_blas_ok=yes; BLAS_LIBS="-lessl -lblas"],
[], [-lblas $FLIBS])])
fi
# Generic BLAS library?
if test $ax_blas_ok = no; then
AC_CHECK_LIB(blas, $sgemm, [ax_blas_ok=yes; BLAS_LIBS="-lblas"])
fi
AC_SUBST(BLAS_LIBS)
LIBS="$ax_blas_save_LIBS"
# Finally, execute ACTION-IF-FOUND/ACTION-IF-NOT-FOUND:
if test x"$ax_blas_ok" = xyes; then
ifelse([$1],,AC_DEFINE(HAVE_BLAS,1,[Define if you have a BLAS library.]),[$1])
:
else
ax_blas_ok=no
$2
fi
])dnl AX_BLAS