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academic/h5utils: Added (visualization and conversion of HDF5 data).
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
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9
academic/h5utils/README
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academic/h5utils/README
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H5utils is is a set of utilities for visualization and
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conversion of scientific data in the free, portable HDF5
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format. Besides providing a simple tool for batch
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visualization as PNG images, h5utils also includes
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programs to convert HDF5 datasets into the formats
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required by other free visualization software (e.g.
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plain text, Vis5d, and VTK).
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Optional dependencies: libmatheval, octave, hdf, and perhaps Vis5d.
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114
academic/h5utils/h5utils.SlackBuild
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academic/h5utils/h5utils.SlackBuild
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#!/bin/sh
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# Slackware build script for h5utils
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# Copyright 2019 Paul Kinsler, U.K.
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# All rights reserved.
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#
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# Redistribution and use of this script, with or without modification, is
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# permitted provided that the following conditions are met:
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#
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# 1. Redistributions of this script must retain the above copyright
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# notice, this list of conditions and the following disclaimer.
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#
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# THIS SOFTWARE IS PROVIDED BY THE AUTHOR "AS IS" AND ANY EXPRESS OR IMPLIED
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# WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF
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# MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO
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# EVENT SHALL THE AUTHOR BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
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# SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
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# PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
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# OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
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# WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
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# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
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# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
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PRGNAM=h5utils
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VERSION=${VERSION:-1.13.1}
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BUILD=${BUILD:-1}
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TAG=${TAG:-_SBo}
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if [ -z "$ARCH" ]; then
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case "$( uname -m )" in
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i?86) ARCH=i586 ;;
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arm*) ARCH=arm ;;
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*) ARCH=$( uname -m ) ;;
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esac
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fi
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CWD=$(pwd)
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TMP=${TMP:-/tmp/SBo}
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PKG=$TMP/package-$PRGNAM
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OUTPUT=${OUTPUT:-/tmp}
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if [ "$ARCH" = "i586" ]; then
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SLKCFLAGS="-O2 -march=i586 -mtune=i686"
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LIBDIRSUFFIX=""
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elif [ "$ARCH" = "i686" ]; then
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SLKCFLAGS="-O2 -march=i686 -mtune=i686"
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LIBDIRSUFFIX=""
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elif [ "$ARCH" = "x86_64" ]; then
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SLKCFLAGS="-O2 -fPIC"
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LIBDIRSUFFIX="64"
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else
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SLKCFLAGS="-O2"
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LIBDIRSUFFIX=""
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fi
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# change annoying underscores into hyphens
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SVERSION=$(echo $VERSION | tr '_' '-')
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# make a custom list of doc files in advance
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DOCFILES="AUTHORS COPYING"
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set -e
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rm -rf $PKG
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mkdir -p $TMP $PKG $OUTPUT
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cd $TMP
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rm -rf $PRGNAM-$SVERSION
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tar xvf $CWD/$PRGNAM-$SVERSION.tar.gz
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cd $PRGNAM-$SVERSION
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chown -R root:root .
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find -L . \
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\( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 \
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-o -perm 511 \) -exec chmod 755 {} \; -o \
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\( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \
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-o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
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# if there is no configure script, try to build one!
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if [ ! -f ./configure ] ; then
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./autogen.sh
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fi
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LOCALCONFIGS=
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CFLAGS="$SLKCFLAGS" \
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CPPFLAGS="$SLKCFLAGS" \
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./configure \
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--prefix=/usr \
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--mandir=/usr/man \
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--libdir=/usr/lib${LIBDIRSUFFIX} \
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--docdir=/usr/doc/$PRGNAM-$VERSION \
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--build=$ARCH-slackware-linux \
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$LOCALCONFIGS
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# allow parallel makes if this variable is set;
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# but always finish with a single make in case
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# there is a problem with that
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if [ "${JMULTIMAKE}" ] ; then
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make -j ${JMULTIMAKE}
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fi
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make
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make install DESTDIR=$PKG
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mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION
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install -m 0644 $DOCFILES $PKG/usr/doc/$PRGNAM-$VERSION
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cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild
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find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | grep ELF \
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| cut -f 1 -d : | xargs strip --strip-unneeded 2> /dev/null || true
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mkdir -p $PKG/install
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cat $CWD/slack-desc > $PKG/install/slack-desc
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cd $PKG
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/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
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10
academic/h5utils/h5utils.info
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academic/h5utils/h5utils.info
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PRGNAM="h5utils"
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VERSION="1.13.1"
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HOMEPAGE="https://github.com/NanoComp/h5utils"
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DOWNLOAD="https://github.com/NanoComp/h5utils/releases/download/1.13.1/h5utils-1.13.1.tar.gz"
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MD5SUM="f4d3eac775b6c2a18eac56138e659c37"
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DOWNLOAD_x86_64=""
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MD5SUM_x86_64=""
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REQUIRES="hdf5"
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MAINTAINER="PaulKinsler"
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EMAIL="dr.paul@kinsler.org"
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19
academic/h5utils/slack-desc
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19
academic/h5utils/slack-desc
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# HOW TO EDIT THIS FILE:
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# The "handy ruler" below makes it easier to edit a package description.
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# Line up the first '|' above the ':' following the base package name, and
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# the '|' on the right side marks the last column you can put a character in.
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# You must make exactly 11 lines for the formatting to be correct. It's also
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# customary to leave one space after the ':' except on otherwise blank lines.
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|-----handy-ruler------------------------------------------------------|
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h5utils: h5utils (visualization and conversion of HDF5 data)
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h5utils:
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h5utils: These utilities provide simple tools for batch visualization of
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h5utils: hdf5 datafiles as PNG images. They also allow conversion from hdf5
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h5utils: format into other formats used for visualization, such as plain text,
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h5utils: Vis5d, and VTK.
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h5utils:
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h5utils: Homepage: https://github.com/NanoComp/h5utils
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h5utils:
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h5utils:
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h5utils:
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