academic/h5utils: Added (visualization and conversion of HDF5 data).

Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
This commit is contained in:
PaulKinsler 2019-07-05 22:47:46 +07:00 committed by Willy Sudiarto Raharjo
parent e6588776f5
commit ad296a4e94
4 changed files with 152 additions and 0 deletions

9
academic/h5utils/README Normal file
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H5utils is is a set of utilities for visualization and
conversion of scientific data in the free, portable HDF5
format. Besides providing a simple tool for batch
visualization as PNG images, h5utils also includes
programs to convert HDF5 datasets into the formats
required by other free visualization software (e.g.
plain text, Vis5d, and VTK).
Optional dependencies: libmatheval, octave, hdf, and perhaps Vis5d.

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#!/bin/sh
# Slackware build script for h5utils
# Copyright 2019 Paul Kinsler, U.K.
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
# permitted provided that the following conditions are met:
#
# 1. Redistributions of this script must retain the above copyright
# notice, this list of conditions and the following disclaimer.
#
# THIS SOFTWARE IS PROVIDED BY THE AUTHOR "AS IS" AND ANY EXPRESS OR IMPLIED
# WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF
# MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO
# EVENT SHALL THE AUTHOR BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
# SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
# PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
# OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
# WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
PRGNAM=h5utils
VERSION=${VERSION:-1.13.1}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
i?86) ARCH=i586 ;;
arm*) ARCH=arm ;;
*) ARCH=$( uname -m ) ;;
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
if [ "$ARCH" = "i586" ]; then
SLKCFLAGS="-O2 -march=i586 -mtune=i686"
LIBDIRSUFFIX=""
elif [ "$ARCH" = "i686" ]; then
SLKCFLAGS="-O2 -march=i686 -mtune=i686"
LIBDIRSUFFIX=""
elif [ "$ARCH" = "x86_64" ]; then
SLKCFLAGS="-O2 -fPIC"
LIBDIRSUFFIX="64"
else
SLKCFLAGS="-O2"
LIBDIRSUFFIX=""
fi
# change annoying underscores into hyphens
SVERSION=$(echo $VERSION | tr '_' '-')
# make a custom list of doc files in advance
DOCFILES="AUTHORS COPYING"
set -e
rm -rf $PKG
mkdir -p $TMP $PKG $OUTPUT
cd $TMP
rm -rf $PRGNAM-$SVERSION
tar xvf $CWD/$PRGNAM-$SVERSION.tar.gz
cd $PRGNAM-$SVERSION
chown -R root:root .
find -L . \
\( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 \
-o -perm 511 \) -exec chmod 755 {} \; -o \
\( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \
-o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
# if there is no configure script, try to build one!
if [ ! -f ./configure ] ; then
./autogen.sh
fi
LOCALCONFIGS=
CFLAGS="$SLKCFLAGS" \
CPPFLAGS="$SLKCFLAGS" \
./configure \
--prefix=/usr \
--mandir=/usr/man \
--libdir=/usr/lib${LIBDIRSUFFIX} \
--docdir=/usr/doc/$PRGNAM-$VERSION \
--build=$ARCH-slackware-linux \
$LOCALCONFIGS
# allow parallel makes if this variable is set;
# but always finish with a single make in case
# there is a problem with that
if [ "${JMULTIMAKE}" ] ; then
make -j ${JMULTIMAKE}
fi
make
make install DESTDIR=$PKG
mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION
install -m 0644 $DOCFILES $PKG/usr/doc/$PRGNAM-$VERSION
cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild
find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | grep ELF \
| cut -f 1 -d : | xargs strip --strip-unneeded 2> /dev/null || true
mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}

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PRGNAM="h5utils"
VERSION="1.13.1"
HOMEPAGE="https://github.com/NanoComp/h5utils"
DOWNLOAD="https://github.com/NanoComp/h5utils/releases/download/1.13.1/h5utils-1.13.1.tar.gz"
MD5SUM="f4d3eac775b6c2a18eac56138e659c37"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES="hdf5"
MAINTAINER="PaulKinsler"
EMAIL="dr.paul@kinsler.org"

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# HOW TO EDIT THIS FILE:
# The "handy ruler" below makes it easier to edit a package description.
# Line up the first '|' above the ':' following the base package name, and
# the '|' on the right side marks the last column you can put a character in.
# You must make exactly 11 lines for the formatting to be correct. It's also
# customary to leave one space after the ':' except on otherwise blank lines.
|-----handy-ruler------------------------------------------------------|
h5utils: h5utils (visualization and conversion of HDF5 data)
h5utils:
h5utils: These utilities provide simple tools for batch visualization of
h5utils: hdf5 datafiles as PNG images. They also allow conversion from hdf5
h5utils: format into other formats used for visualization, such as plain text,
h5utils: Vis5d, and VTK.
h5utils:
h5utils: Homepage: https://github.com/NanoComp/h5utils
h5utils:
h5utils:
h5utils: