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academic/tophat: Updated for version 2.0.13.

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Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
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Petar Petrov 2015-02-04 20:05:59 +07:00 committed by Willy Sudiarto Raharjo
parent c7b5f68ad5
commit a2cdd781cc
4 changed files with 9 additions and 7 deletions
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2
academic/tophat/README
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@ -8,3 +8,5 @@ Medicine at Johns Hopkins University, the Departments of Mathematics
and Molecular and Cell Biology at the University of California,
Berkeley and the Department of Stem Cell and Regenerative Biology at
Harvard University.
A recommended dependency is bowtie2.

2
academic/tophat/slack-desc
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@ -14,6 +14,6 @@ tophat: high-throughput short read aligner Bowtie, and then analyzes the
tophat: mapping results to identify splice junctions between exons.
tophat:
tophat: Home: http://tophat.cbcb.umd.edu/
tophat: References: /usr/doc/tophat-2.0.11/References
tophat: References: /usr/doc/tophat-2.0.13/References
tophat:
tophat:

4
academic/tophat/tophat.SlackBuild
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@ -2,7 +2,7 @@
# Slackware build script for tophat
# Copyright 2013-2014 Petar Petrov, petar.petrov@student.oulu.fi
# Copyright 2013-2015 Petar Petrov, petar.petrov@student.oulu.fi
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@ -23,7 +23,7 @@
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
PRGNAM=tophat
VERSION=${VERSION:-2.0.12}
VERSION=${VERSION:-2.0.13}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}

8
academic/tophat/tophat.info
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@ -1,10 +1,10 @@
PRGNAM="tophat"
VERSION="2.0.12"
VERSION="2.0.13"
HOMEPAGE="http://ccb.jhu.edu/software/tophat/"
DOWNLOAD="http://ccb.jhu.edu/software/tophat/downloads/tophat-2.0.12.tar.gz"
MD5SUM="b419604b45d94f6e878a141f05dd1d75"
DOWNLOAD="http://ccb.jhu.edu/software/tophat/downloads/tophat-2.0.13.tar.gz"
MD5SUM="df5c22c85d7c631ee37f61e91f81ae4d"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES="bowtie2 samtools"
REQUIRES=""
MAINTAINER="Petar Petrov"
EMAIL="petar.petrov@student.oulu.fi"