Miroirs/slackbuilds_ponce
1
0
Fork 0
mirror of https://github.com/Ponce/slackbuilds synced 2024-11-16 19:50:19 +01:00
Code Issues Projects Releases Packages Wiki Activity Actions

academic/ViennaRNA: Upgrade to version 2.6.3

Browse source 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
This commit is contained in:
brobr 2023-09-18 10:14:47 +01:00 committed by Willy Sudiarto Raharjo
parent 1ef6d04a61
commit a0ff841952
No known key found for this signature in database
GPG key ID: 3F617144D7238786
2 changed files with 13 additions and 9 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

12
academic/ViennaRNA/ViennaRNA.SlackBuild
View file

@ -2,7 +2,7 @@
# Slackware build script for ViennaRNA
# Copyright 2018-2022 Rob van Nues
# Copyright 2018-2023 Rob van Nues
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@ -25,7 +25,7 @@
cd $(dirname $0) ; CWD=$(pwd)
PRGNAM=ViennaRNA
VERSION=${VERSION:-2.5.1}
VERSION=${VERSION:-2.6.3}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
PKGTYPE=${PKGTYPE:-tgz}
@ -101,7 +101,10 @@ find -L . \
# for Z-score filtering via statically linked libsvm:
# - SVM Z-score filter in RNALfold
# - GNU Scientific Library for RNApvmin
# RNAxplorer blocks configuration despite intalling dependencies lapacke and lapack, so ignore it
# https://github.com/ViennaRNA/ViennaRNA/issues/206
rnaxplorer="" ; [ "${RNAXPLORER:-no}" != "yes" ] && rnaxplorer="--without-rnaxplorer"
# everything else is enabled
cluster="" ; [ "${CLUSTER:-yes}" != "no" ] && cluster="--with-cluster"
kinwalker="" ; [ "${KINWALKER:-yes}" != "no" ] && kinwalker="--with-kinwalker"
# Default enabled features:
@ -130,6 +133,7 @@ CXXFLAGS="$SLKCFLAGS" \
--build=$ARCH-slackware-linux \
--with-python2=no \
--with-doc=no \
$rnaxplorer \
$cluster \
$kinwalker \
$forester \
@ -169,7 +173,7 @@ rm -r $PKG/usr/share/ViennaRNA/bin
# re-organise info files the Slackware/SBo way
mkdir $PKG/usr/info/
rm -rf $PKG/usr/share/info/dir
rm $PKG/usr/share/info/dir
#gzip and move info file
gzip -9 $PKG/usr/share/info/*.info
mv $PKG/usr/share/info/*.info* $PKG/usr/info/

10
academic/ViennaRNA/ViennaRNA.info
View file

@ -1,10 +1,10 @@
PRGNAM="ViennaRNA"
VERSION="2.5.1"
VERSION="2.6.3"
HOMEPAGE="https://www.tbi.univie.ac.at/RNA"
DOWNLOAD="https://www.tbi.univie.ac.at/RNA/download/sourcecode/2_5_x/ViennaRNA-2.5.1.tar.gz"
MD5SUM="25abee6dc24b863e50d44b154357b9c7"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
DOWNLOAD="UNSUPPORTED"
MD5SUM=""
DOWNLOAD_x86_64="https://www.tbi.univie.ac.at/RNA/download/sourcecode/2_6_x/ViennaRNA-2.6.3.tar.gz"
MD5SUM_x86_64="405b8126efc1dd8f52bfc984d9171c9e"
REQUIRES=""
MAINTAINER="Rob van Nues"
EMAIL="sborg63@disroot.org"