academic/mpb: Added (computing electromagnetic band).

Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
This commit is contained in:
PaulKinsler 2020-05-09 18:02:53 +07:00 committed by Willy Sudiarto Raharjo
parent 213db58f3e
commit 4973a958eb
No known key found for this signature in database
GPG key ID: 887B8374D7333381
4 changed files with 220 additions and 0 deletions

37
academic/mpb/README Normal file
View file

@ -0,0 +1,37 @@
mpb (computes electromagnetic band structures and modes)
MPB is a free and open-source software package for computing electromagnetic
band structures and modes. It saves results in hdf5 format.
You may wish to also install: h5utils
You very probably want to build a multi-processor version of this
code by adding the "--with-openmp" configure option.
Configuration:
If the build script can find the ATLAS libraries, it will adapt the configure
options to use them rather than the default lapack.
You can add additional options to the command line using the environment
variable SBOPTIONS_MPB; e.g. to enable MPI (multi-processor calculation)
using openmp, use:
SBOPTIONS_MPB="--with-openmp" ./mpb.Slackbuild
Alternatively, if building non-interactively (e.g. if using slpkg), use/create
the file /etc/sbo_pkg_options.conf since this slackbuild script will search it
for options. Simply include a line starting "mpb:" followed by options, e.g.:
mpb: --with-openmp
If you want to use mpich instead of openmp, you will have to recompile the
installed slackware fftw library with two additional configure options, i.e.
not only "--with-mpi" but also "--enable-type-prefix".
Note:
This mpb build script does *two* passes. This is so that when MPI
support is enabled, the first compiles the mpb-data utility, then the second
builds the full MPI version. The resulting package includes both, with any
MPI version of the files replacing the non- MPI version.

154
academic/mpb/mpb.SlackBuild Normal file
View file

@ -0,0 +1,154 @@
#!/bin/sh
# Slackware build script for mpb
# Copyright 2019,2020 Paul Kinsler, U.K.
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
# permitted provided that the following conditions are met:
#
# 1. Redistributions of this script must retain the above copyright
# notice, this list of conditions and the following disclaimer.
#
# THIS SOFTWARE IS PROVIDED BY THE AUTHOR "AS IS" AND ANY EXPRESS OR IMPLIED
# WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF
# MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO
# EVENT SHALL THE AUTHOR BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
# SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
# PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
# OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
# WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
PRGNAM=mpb
VERSION=${VERSION:-1.10.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
i?86) ARCH=i586 ;;
arm*) ARCH=arm ;;
*) ARCH=$( uname -m ) ;;
esac
fi
CWD=$(pwd)
TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
if [ "$ARCH" = "i586" ]; then
SLKCFLAGS="-O2 -march=i586 -mtune=i686"
LIBDIRSUFFIX=""
elif [ "$ARCH" = "i686" ]; then
SLKCFLAGS="-O2 -march=i686 -mtune=i686"
LIBDIRSUFFIX=""
elif [ "$ARCH" = "x86_64" ]; then
SLKCFLAGS="-O2 -fPIC"
LIBDIRSUFFIX="64"
else
SLKCFLAGS="-O2"
LIBDIRSUFFIX=""
fi
# change annoying underscores into hyphens
SVERSION=$(echo $VERSION | tr '_' '-')
# make a custom list of doc files in advance
DOCFILES="AUTHORS COPYING COPYRIGHT TODO README.md NEWS.md"
set -e
rm -rf $PKG
mkdir -p $TMP $PKG $OUTPUT
cd $TMP
rm -rf $PRGNAM-$SVERSION
tar xvf $CWD/$PRGNAM-$SVERSION.tar.gz
cd $PRGNAM-$SVERSION
chown -R root:root .
find -L . \
\( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 \
-o -perm 511 \) -exec chmod 755 {} \; -o \
\( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \
-o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
# if there is no configure script, try to build one!
if [ ! -f ./configure ] ; then
./autogen.sh
fi
LOCALCONFIGS=
XDBFILE=/etc/sbo_pkg_options.conf
if [ -f ${XDBFILE} ] ; then
LOCALCONFIGS=${LOCALCONFIGS}" "$(grep "^${PRGNAM}:" ${XDBFILE} | grep -v '^#' | awk -F: '{print$2}')
echo Build options selected by file: LOCALCONFIGS=${LOCALCONFIGS}
fi
if [ -n "${SBOPTIONS_MPB}" ] ; then
LOCALCONFIGS=${LOCALCONFIGS}" "${SBOPTIONS_MPB}
echo Build options selected by environment: LOCALCONFIGS=${LOCALCONFIGS}
fi
# check for the Atlas replacement for blas; if the libraries are found,
# add the configure option accordingly
if [ -f /usr/lib${LIBDIRSUFFIX}/libatlas.a ] ; then
if [ -f /usr/lib{$LIBDIRSUFFIX}/libatlas.so ] ; then
echo "NOTICE: libatlas was found, configure --with-blas=atlas"
LOCALCONFIGS=${LOCALCONFIGS}" --with-blas=atlas"
fi
fi
# LOCALCONFIGS without any mpi requests so I can do a no-mpi compile.
SPLOCALCONFIGS=$(echo $LOCALCONFIGS | sed s/--with-mpi// | sed s/--with-openmp//)
# do two passes; first with no mpi (to get mpb-data),
# then a second *with* mpi
CFLAGS="$SLKCFLAGS" \
CPPFLAGS="$SLKCFLAGS" \
./configure \
--prefix=/usr \
--mandir=/usr/man \
--libdir=/usr/lib${LIBDIRSUFFIX} \
--docdir=/usr/doc/$PRGNAM-$VERSION \
--build=$ARCH-slackware-linux \
$SPLOCALCONFIGS
make
make install DESTDIR=$PKG
CFLAGS="$SLKCFLAGS" \
CPPFLAGS="$SLKCFLAGS" \
./configure \
--prefix=/usr \
--mandir=/usr/man \
--libdir=/usr/lib${LIBDIRSUFFIX} \
--docdir=/usr/doc/$PRGNAM-$VERSION \
--build=$ARCH-slackware-linux \
$LOCALCONFIGS
make
make install DESTDIR=$PKG
find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | grep ELF \
| cut -f 1 -d : | xargs strip --strip-unneeded 2> /dev/null || true
find $PKG/usr/man -type f -exec gzip -9 {} \;
for i in $( find $PKG/usr/man -type l ) ; do ln -s $( readlink $i ).gz $i.gz ; rm $i ; done
mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION
install -m 0644 $DOCFILES $PKG/usr/doc/$PRGNAM-$VERSION
cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild
mkdir -p $PKG/install
cat $CWD/slack-desc > $PKG/install/slack-desc
cd $PKG
/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}

10
academic/mpb/mpb.info Normal file
View file

@ -0,0 +1,10 @@
PRGNAM="mpb"
VERSION="1.10.0"
HOMEPAGE="https://github.com/NanoComp/mpb"
DOWNLOAD="https://github.com/NanoComp/mpb/releases/download/v1.10.0/mpb-1.10.0.tar.gz"
MD5SUM="92f91cf5e0206e2e4531b780b45469c4"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES="lapack hdf5 libctl"
MAINTAINER="PaulKinsler"
EMAIL="dr.paul@kinsler.org"

19
academic/mpb/slack-desc Normal file
View file

@ -0,0 +1,19 @@
# HOW TO EDIT THIS FILE:
# The "handy ruler" below makes it easier to edit a package description.
# Line up the first '|' above the ':' following the base package name, and
# the '|' on the right side marks the last column you can put a character in.
# You must make exactly 11 lines for the formatting to be correct. It's also
# customary to leave one space after the ':' except on otherwise blank lines.
|-----handy-ruler------------------------------------------------------|
mpb: mpb (computation of electromagnetic band structures and modes)
mpb:
mpb: MPB is a free and open-source software package for
mpb: computing electromagnetic band structures and modes.
mpb:
mpb:
mpb:
mpb: Homepage: https://github.com/NanoComp/mpb
mpb:
mpb:
mpb: