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academic/metis: Added (matrix ordering)
Signed-off-by: dsomero <xgizzmo@slackbuilds.org>
This commit is contained in:
Kyle Guinn
Erik Hanson
parent
d115764b92
commit
1fdd970212
5 changed files with 302 additions and 0 deletions
3
academic/metis/README
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3
academic/metis/README
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METIS is a set of serial programs for partitioning graphs, partitioning
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finite element meshes, and producing fill reducing orderings for sparse
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matrices.
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188
academic/metis/autotoolize.diff
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188
academic/metis/autotoolize.diff
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diff --git a/Doc/Makefile.am b/Doc/Makefile.am
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new file mode 100644
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--- /dev/null
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+++ b/Doc/Makefile.am
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@@ -0,0 +1,5 @@
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+dist_noinst_DATA = manual.ps
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+pdf_DATA = manual.pdf
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+
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+%.pdf: %.ps
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+ ps2pdf $<
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diff --git a/Graphs/Makefile.am b/Graphs/Makefile.am
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new file mode 100644
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--- /dev/null
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+++ b/Graphs/Makefile.am
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@@ -0,0 +1,2 @@
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+EXTRA_DIST = 0README
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+dist_noinst_DATA = 4elt.graph metis.mesh test.mgraph
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diff --git a/Lib/Makefile.am b/Lib/Makefile.am
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new file mode 100644
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--- /dev/null
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+++ b/Lib/Makefile.am
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@@ -0,0 +1,61 @@
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+pkgincludedir = $(includedir)/metis
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+pkginclude_HEADERS = defs.h macros.h metis.h proto.h rename.h struct.h
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+
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+SRC = \
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+ balance.c \
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+ bucketsort.c \
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+ ccgraph.c \
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+ coarsen.c \
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+ compress.c \
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+ debug.c \
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+ estmem.c \
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+ fm.c \
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+ fortran.c \
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+ frename.c \
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+ graph.c \
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+ initpart.c \
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+ kmetis.c \
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+ kvmetis.c \
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+ kwayfm.c \
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+ kwayrefine.c \
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+ kwayvolfm.c \
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+ kwayvolrefine.c \
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+ match.c \
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+ mbalance.c \
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+ mbalance2.c \
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+ mcoarsen.c \
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+ memory.c \
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+ mesh.c \
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+ meshpart.c \
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+ mfm.c \
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+ mfm2.c \
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+ mincover.c \
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+ minitpart.c \
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+ minitpart2.c \
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+ mkmetis.c \
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+ mkwayfmh.c \
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+ mkwayrefine.c \
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+ mmatch.c \
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+ mmd.c \
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+ mpmetis.c \
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+ mrefine.c \
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+ mrefine2.c \
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+ mutil.c \
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+ myqsort.c \
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+ ometis.c \
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+ parmetis.c \
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+ pmetis.c \
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+ pqueue.c \
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+ refine.c \
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+ separator.c \
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+ sfm.c \
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+ srefine.c \
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+ stat.c \
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+ subdomains.c \
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+ timing.c \
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+ util.c
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+
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+lib_LTLIBRARIES = libmetis.la
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+libmetis_la_SOURCES = $(SRC)
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+libmetis_la_LIBADD = -lm
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+libmetis_la_LDFLAGS = -no-undefined -version-info 4:1:0
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diff --git a/Makefile.am b/Makefile.am
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new file mode 100644
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--- /dev/null
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+++ b/Makefile.am
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@@ -0,0 +1,5 @@
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+SUBDIRS = Lib Programs Graphs Test Doc
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+EXTRA_DIST = CHANGES FILES INSTALL VERSION metis.pc.in
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+
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+pkgconfigdir = $(libdir)/pkgconfig
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+pkgconfig_DATA = metis.pc
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diff --git a/Programs/Makefile.am b/Programs/Makefile.am
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new file mode 100644
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--- /dev/null
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+++ b/Programs/Makefile.am
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@@ -0,0 +1,23 @@
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+AM_CPPFLAGS = -I$(top_srcdir)/Lib
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+LDADD = $(top_builddir)/Lib/libmetis.la
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+
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+bin_PROGRAMS = \
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+ pmetis \
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+ kmetis \
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+ oemetis \
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+ onmetis \
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+ mesh2dual \
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+ mesh2nodal \
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+ partdmesh \
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+ partnmesh \
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+ graphchk
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+
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+pmetis_SOURCES = pmetis.c io.c
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+kmetis_SOURCES = kmetis.c io.c
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+oemetis_SOURCES = oemetis.c io.c smbfactor.c
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+onmetis_SOURCES = onmetis.c io.c smbfactor.c
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+mesh2dual_SOURCES = mesh2dual.c io.c
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+mesh2nodal_SOURCES = mesh2nodal.c io.c
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+partdmesh_SOURCES = partdmesh.c io.c
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+partnmesh_SOURCES = partnmesh.c io.c
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+graphchk_SOURCES = graphchk.c io.c
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diff --git a/Test/Makefile.am b/Test/Makefile.am
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new file mode 100644
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--- /dev/null
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+++ b/Test/Makefile.am
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@@ -0,0 +1,11 @@
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+AM_CPPFLAGS = -I$(top_srcdir)/Lib
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+LDADD = $(top_builddir)/Lib/libmetis.la
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+
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+check_PROGRAMS = mtest
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+mtest_SOURCES = mtest.c ../Programs/io.c
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+
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+GRAPHS = \
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+ ../Graphs/4elt.graph
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+
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+check-local: $(check_PROGRAMS) $(GRAPHS)
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+ -./mtest ../Graphs/4elt.graph
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diff --git a/configure.ac b/configure.ac
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new file mode 100644
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--- /dev/null
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+++ b/configure.ac
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@@ -0,0 +1,31 @@
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+AC_PREREQ([2.65])
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+AC_INIT([METIS], [4.0.1], [karypis@cs.umn.edu])
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+AC_CONFIG_SRCDIR([Lib/metis.h])
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+AC_CONFIG_HEADER([config.h])
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+AM_INIT_AUTOMAKE([foreign])
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+LT_INIT
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+
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+AC_PROG_INSTALL
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+AC_PROG_CC
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+
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+LIBS_SAVED=$LIBS
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+
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+AC_CHECK_LIB([m], [sqrt])
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+
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+AC_CHECK_HEADERS([malloc.h stdlib.h string.h strings.h])
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+
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+AC_FUNC_MALLOC
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+AC_FUNC_REALLOC
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+AC_CHECK_FUNCS([pow sqrt strtol])
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+
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+LIBS=$LIBS_SAVED
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+
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+AC_CONFIG_FILES([
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+ Makefile
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+ metis.pc
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+ Doc/Makefile
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+ Graphs/Makefile
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+ Lib/Makefile
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+ Programs/Makefile
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+ Test/Makefile])
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+AC_OUTPUT
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diff --git a/metis.pc.in b/metis.pc.in
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new file mode 100644
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--- /dev/null
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+++ b/metis.pc.in
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@@ -0,0 +1,10 @@
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+prefix=@prefix@
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+exec_prefix=@exec_prefix@
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+libdir=@libdir@
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+includedir=@includedir@
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+
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+Name: @PACKAGE_NAME@
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+Description: Software for partitioning unstructured graphs and meshes
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+Version: @PACKAGE_VERSION@
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+Libs: -L${libdir} -lmetis
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+Cflags: -I${includedir}/metis
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82
academic/metis/metis.SlackBuild
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82
academic/metis/metis.SlackBuild
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#!/bin/sh
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# Slackware build script for METIS
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# Written by Kyle Guinn <elyk03@gmail.com>
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PRGNAM=metis
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VERSION=${VERSION:-4.0.1}
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SRCVERSION=${SRCVERSION:-4.0}
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BUILD=${BUILD:-1}
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TAG=${TAG:-_SBo}
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if [ -z "$ARCH" ]; then
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case "$(uname -m)" in
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i?86) ARCH=i486 ;;
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arm*) ARCH=arm ;;
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*) ARCH=$(uname -m) ;;
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esac
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fi
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CWD=$(pwd)
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TMP=${TMP:-/tmp/SBo}
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PKG=$TMP/package-$PRGNAM
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OUTPUT=${OUTPUT:-/tmp}
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DOCS="CHANGES FILES INSTALL VERSION"
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if [ "$ARCH" = "i486" ]; then
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SLKCFLAGS="-O2 -march=i486 -mtune=i686"
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LIBDIRSUFFIX=""
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elif [ "$ARCH" = "i686" ]; then
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SLKCFLAGS="-O2 -march=i686 -mtune=i686"
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LIBDIRSUFFIX=""
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elif [ "$ARCH" = "x86_64" ]; then
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SLKCFLAGS="-O2 -fPIC"
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LIBDIRSUFFIX="64"
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else
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SLKCFLAGS="-O2"
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LIBDIRSUFFIX=""
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fi
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set -e
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rm -rf $PKG
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mkdir -p $TMP $PKG $OUTPUT
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cd $TMP
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rm -rf $PRGNAM-$SRCVERSION
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tar xvf $CWD/$PRGNAM-$SRCVERSION.tar.gz
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cd $PRGNAM-$SRCVERSION
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chown -R root:root .
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chmod -R u+w,go+r-w,a-st .
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# The C standard reserves all names that begin with underscores. Metis
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# ignores this and now we have naming conflicts with glibc. Right now only
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# __log2 conflicts, but this should fix the problem for good.
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sed -i 's/__/metis__/g' Lib/rename.h
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patch -p1 < $CWD/autotoolize.diff
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autoreconf -vif
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CFLAGS="$SLKCFLAGS" \
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CXXFLAGS="$SLKCFLAGS" \
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./configure \
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--prefix=/usr \
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--libdir=/usr/lib${LIBDIRSUFFIX} \
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--sysconfdir=/etc \
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--localstatedir=/var \
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--mandir=/usr/man \
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--docdir=/usr/doc/$PRGNAM-$VERSION \
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--build=$ARCH-slackware-linux
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make
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make install-strip DESTDIR=$PKG
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mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION
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cp -a $DOCS $PKG/usr/doc/$PRGNAM-$VERSION
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cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild
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mkdir -p $PKG/install
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cat $CWD/slack-desc > $PKG/install/slack-desc
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cd $PKG
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/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
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10
academic/metis/metis.info
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10
academic/metis/metis.info
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PRGNAM="metis"
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VERSION="4.0.1"
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HOMEPAGE="http://glaros.dtc.umn.edu/gkhome/metis/metis/overview"
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DOWNLOAD="http://glaros.dtc.umn.edu/gkhome/fetch/sw/metis/metis-4.0.tar.gz"
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MD5SUM="0aa546419ff7ef50bd86ce1ec7f727c7"
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DOWNLOAD_x86_64=""
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MD5SUM_x86_64=""
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MAINTAINER="Kyle Guinn"
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EMAIL="elyk03@gmail.com"
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APPROVED="dsomero"
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19
academic/metis/slack-desc
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19
academic/metis/slack-desc
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# HOW TO EDIT THIS FILE:
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# The "handy ruler" below makes it easier to edit a package description. Line
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# up the first '|' above the ':' following the base package name, and the '|'
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# on the right side marks the last column you can put a character in. You must
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# make exactly 11 lines for the formatting to be correct. It's also
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# customary to leave one space after the ':'.
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|-----handy-ruler------------------------------------------------------|
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metis: METIS (serial graph partitioning and fill-reducing matrix ordering)
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metis:
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metis: METIS is a set of serial programs for partitioning graphs,
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metis: partitioning finite element meshes, and producing fill reducing
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metis: orderings for sparse matrices.
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metis:
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metis:
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metis:
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metis:
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metis:
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metis:
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