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academic/treeview: Upgraded to version 0.5.
Yes, the previous version was 0.5.1, and YES, somehow 0.5 is newer. Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
This commit is contained in:
Petar Petrov
Niels Horn
parent
68e74dd70b
commit
054cb56659
8 changed files with 48 additions and 1841 deletions
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@ -1,21 +1,21 @@
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TreeView is a simple program for displaying phylogenies. Some of its
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TreeView X is a simple program for displaying phylogenies. Some of its
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features include:
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- reads many different tree file formats (including NEXUS, PHYLIP,
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- reads many different tree file formats (including NEXUS, PHYLIP,
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Hennig86, NONA, MEGA, and ClustalW/X)
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- supports standard the TrueType and Postscript fonts
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- supports native graphics file format for copying pictures into
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- supports native graphics file format for copying pictures into
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other applications, and for saving graphics files
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- print preview
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- can print multiple trees per page and/or one tree over more than
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- can print multiple trees per page and/or one tree over more than
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one page
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- has drag-and-drop facility for easy opening of files
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- Web-based online help
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- tree editor
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For details and citation:
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Page, R. D. M. 1996. TREEVIEW: An application to display phylogenetic
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trees on personal computers. Computer Applications in the Biosciences
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12: 357-358.
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Page, R. D. M. 1996. TREEVIEW: An application to display phylogenetic
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trees on personal computers. Computer Applications in the Biosciences
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12: 357-358.
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This requires wxGTK or wxPython, available at SlackBuilds.org.
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This requires either wxGTK or wxPython.
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@ -1 +1,3 @@
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Page, R. D. M. 1996. TREEVIEW: An application to display phylogenetic trees on personal computers. Computer Applications in the Biosciences 12: 357-358.
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Page, R. D. M. 1996. TREEVIEW: An application to display phylogenetic
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trees on personal computers. Computer Applications in the Biosciences
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12: 357-358
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@ -8,12 +8,12 @@
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|-----handy-ruler------------------------------------------------------|
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treeview: treeview (Program to display phylogenetic trees)
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treeview:
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treeview: TreeView provides a simple way to view the contents of a NEXUS,
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treeview: TreeView X provides a simple way to view the contents of a NEXUS,
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treeview: PHYLIP, Hennig86, Clustal, or other format tree file.
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treeview:
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treeview:
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treeview:
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treeview:
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treeview:
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treeview: References: /usr/doc/treeview-$VERSION/References
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treeview: Home: http://darwin.zoology.gla.ac.uk/~rpage/treeviewx/
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treeview: Home: http://code.google.com/p/treeviewx/
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treeview:
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treeview:
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treeview:
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treeview:
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@ -1,20 +1,29 @@
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#!/bin/sh
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# Slackware build script for treeview
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# Written by Petar Petrov, <ppetrov@paju.oulu.fi> and
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# hereby submitted to the public domain
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# Based on the treeview PKGBUILD from Archlinux AUR
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# (http://aur.archlinux.org/packages.php?ID=19489).
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# PKGBUILD submitter is abhidg and PKGBUILD maintainer
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# is Stunts. Thank you!
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# THIS SLACKBUILD IS DISTRIBUTETD IN THE HOPE OF BEING
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# USEFUL BUT WITHOUT ANY WARRANTY. THE AUTHOR IS _NOT_
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# RESPONSIBLE FOR ANY DAMAGE OR DATA LOSS CAUSED BY IT.
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# Copyright 2011 Petar Petrov, ppetrov@paju.oulu.fi
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# All rights reserved.
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#
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# Redistribution and use of this script, with or without modification, is
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# permitted provided that the following conditions are met:
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#
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# 1. Redistributions of this script must retain the above copyright
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# notice, this list of conditions and the following disclaimer.
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#
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# THIS SOFTWARE IS PROVIDED BY THE AUTHOR "AS IS" AND ANY EXPRESS OR IMPLIED
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# WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF
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# MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO
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# EVENT SHALL THE AUTHOR BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
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# SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
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# PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
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# OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
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# WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
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# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
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# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
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PRGNAM=treeview
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VERSION=${VERSION:-0.5.1}
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VERSION=${VERSION:-0.5}
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BUILD=${BUILD:-1}
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TAG=${TAG:-_SBo}
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@ -62,13 +71,6 @@ find . \
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\( -perm 666 -o -perm 664 -o -perm 600 -o -perm 444 -o -perm 440 -o -perm 400 \) \
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-exec chmod 644 {} \;
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# The patch is from Archlinux AUR, as mentioned above.
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# For AUR it has been taken from Debian. Thank you both!
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patch -p1 < $CWD/treeviewx_0.5.1-7.diff
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for i in ./debian/patches/*.diff; do
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patch -p1 < $i
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done
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# Disable SVG support. If you want it, you should build
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# wxGTK or wxPython including svg from contrib/src/svg
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# Then, of course comment the next line.
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@ -91,13 +93,11 @@ find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | gr
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| cut -f 1 -d : | xargs strip --strip-unneeded 2> /dev/null || true
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mkdir -p $PKG/usr/share/{applications,pixmaps}
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cp $CWD/tv.desktop $PKG/usr/share/applications
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cp $CWD/tv.png $PKG/usr/share/pixmaps
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cp $CWD/$PRGNAM.desktop $PKG/usr/share/applications
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cp $CWD/$PRGNAM.png $PKG/usr/share/pixmaps
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mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION
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cp -a \
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COPYING INSTALL \
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$PKG/usr/doc/$PRGNAM-$VERSION
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cp -a COPYING INSTALL $PKG/usr/doc/$PRGNAM-$VERSION
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cat $CWD/References > $PKG/usr/doc/$PRGNAM-$VERSION/References
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cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild
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@ -1,7 +1,8 @@
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[Desktop Entry]
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Categories=Education;
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Exec=tv
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Icon=tv.png
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Name=TreeView
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Icon=treeview
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Name=TreeView X
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StartupNotify=false
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Type=Application
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GenericName=
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@ -1,10 +1,10 @@
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PRGNAM="treeview"
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VERSION="0.5.1"
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HOMEPAGE="http://taxonomy.zoology.gla.ac.uk/rod/treeview.html"
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DOWNLOAD="http://darwin.zoology.gla.ac.uk/%7Erpage/treeviewx/download/0.5/tv-0.5.1.tar.gz"
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MD5SUM="07e1ed8873c5f19ded7294668233bae1"
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VERSION="0.5"
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HOMEPAGE="http://code.google.com/p/treeviewx/"
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DOWNLOAD="http://treeviewx.googlecode.com/files/tv-0.5.tar.gz"
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MD5SUM="8059a306b723e6fb4d3befcf302b2920"
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DOWNLOAD_x86_64=""
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MD5SUM_x86_64=""
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MAINTAINER="Petar Petrov"
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EMAIL="ppetrov@paju.oulu.fi"
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APPROVED="Niels Horn"
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APPROVED="rworkman"
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