mirror of
https://github.com/Ponce/slackbuilds
synced 2024-11-24 10:02:29 +01:00
academic/csparse: BUILD bump for SuiteSparse 4.5.5.
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
This commit is contained in:
Kyle Guinn
Willy Sudiarto Raharjo
parent
e738b24260
commit
050645dbc5
4 changed files with 596 additions and 222 deletions
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@ -2,7 +2,7 @@
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# Slackware build script for CSparse
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# Copyright 2013-2016 Kyle Guinn <elyk03@gmail.com>, USA
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# Copyright 2013-2017 Kyle Guinn <elyk03@gmail.com>, USA
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# All rights reserved.
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#
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# Redistribution and use of this script, with or without modification, is
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@ -26,8 +26,8 @@ PRGNAM=csparse
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SRCNAM=SuiteSparse
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SUBDIR=CSparse
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VERSION=${VERSION:-3.1.9}
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SRCVER=${SRCVER:-4.5.3}
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BUILD=${BUILD:-1}
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SRCVER=${SRCVER:-4.5.5}
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BUILD=${BUILD:-2}
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TAG=${TAG:-_SBo}
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if [ -z "$ARCH" ]; then
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@ -40,7 +40,7 @@ fi
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CWD=$(pwd)
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TMP=${TMP:-/tmp/SBo}
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PKG=$TMP/package-$PRGNAM
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PKG=$TMP/package-$PRGNAM-$VERSION
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OUTPUT=${OUTPUT:-/tmp}
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DOCS="README.txt Doc/ChangeLog Doc/License.txt Doc/lesser.txt"
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@ -76,7 +76,7 @@ cd $SRCNAM/$SUBDIR
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chown -R root:root .
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chmod -R u+w,go-w,a+rX-st .
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patch -p1 < $CWD/patches/autotoolize.diff
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patch -p1 < $CWD/patches/autoconfiscate.diff
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autoreconf -vif
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./configure \
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@ -87,8 +87,6 @@ autoreconf -vif
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--mandir=/usr/man \
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--infodir=/usr/info \
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--docdir=/usr/doc/$PRGNAM-$VERSION \
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--enable-shared \
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--disable-static \
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--disable-dependency-tracking \
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--build=$ARCH-slackware-linux \
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CFLAGS="$SLKCFLAGS" \
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@ -1,8 +1,8 @@
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PRGNAM="csparse"
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VERSION="3.1.9"
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HOMEPAGE="http://faculty.cse.tamu.edu/davis/suitesparse.html"
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DOWNLOAD="http://faculty.cse.tamu.edu/davis/SuiteSparse/SuiteSparse-4.5.3.tar.gz"
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MD5SUM="8ec57324585df3c6483ad7f556afccbd"
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DOWNLOAD="http://faculty.cse.tamu.edu/davis/SuiteSparse/SuiteSparse-4.5.5.tar.gz"
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MD5SUM="0a5b38af0016f009409a9606d2f1b555"
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DOWNLOAD_x86_64=""
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MD5SUM_x86_64=""
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REQUIRES=""
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589
academic/csparse/patches/autoconfiscate.diff
Normal file
589
academic/csparse/patches/autoconfiscate.diff
Normal file
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@ -0,0 +1,589 @@
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diff --git a/Demo/Makefile.am b/Demo/Makefile.am
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new file mode 100644
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--- /dev/null
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+++ b/Demo/Makefile.am
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@@ -0,0 +1,88 @@
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+AM_CPPFLAGS = -I$(top_srcdir)/Include
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+LDADD = $(top_builddir)/Source/libcsparse.la
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+
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+EXTRA_DIST = \
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+ README.txt \
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+ cs_demo.out
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+
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+# Disable the .out implicit pattern rule. Prevents GNU make from
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+# adding bogus dependencies for the .out files listed above.
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+%.out: %
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+
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+check_PROGRAMS = \
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+ cs_demo1 \
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+ cs_demo2 \
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+ cs_demo3
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+
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+check_LTLIBRARIES = \
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+ libcs_demo.la
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+
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+cs_demo1_SOURCES = cs_demo1.c
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+cs_demo2_SOURCES = cs_demo2.c
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+cs_demo3_SOURCES = cs_demo3.c
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+libcs_demo_la_SOURCES = cs_demo.c cs_demo.h
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+cs_demo2_LDADD = libcs_demo.la $(LDADD)
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+cs_demo3_LDADD = libcs_demo.la $(LDADD)
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+
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+if !CODE_COVERAGE_ENABLED
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+MATRICES = \
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+ $(top_srcdir)/Matrix/ash219 \
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+ $(top_srcdir)/Matrix/bcsstk01 \
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+ $(top_srcdir)/Matrix/bcsstk16 \
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+ $(top_srcdir)/Matrix/fs_183_1 \
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+ $(top_srcdir)/Matrix/lp_afiro \
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+ $(top_srcdir)/Matrix/mbeacxc \
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+ $(top_srcdir)/Matrix/t1 \
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+ $(top_srcdir)/Matrix/west0067
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+
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+check-local: $(check_PROGRAMS) $(MATRICES)
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+ -./cs_demo1 < $(top_srcdir)/Matrix/t1
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+ -./cs_demo2 < $(top_srcdir)/Matrix/t1
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+ -./cs_demo2 < $(top_srcdir)/Matrix/ash219
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+ -./cs_demo2 < $(top_srcdir)/Matrix/bcsstk01
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+ -./cs_demo2 < $(top_srcdir)/Matrix/fs_183_1
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+ -./cs_demo2 < $(top_srcdir)/Matrix/mbeacxc
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+ -./cs_demo2 < $(top_srcdir)/Matrix/west0067
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+ -./cs_demo2 < $(top_srcdir)/Matrix/lp_afiro
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+ -./cs_demo2 < $(top_srcdir)/Matrix/bcsstk16
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+ -./cs_demo3 < $(top_srcdir)/Matrix/bcsstk01
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+ -./cs_demo3 < $(top_srcdir)/Matrix/bcsstk16
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+
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+else
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+MATRICES = \
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+ $(top_srcdir)/Tcov/nil \
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+ $(top_srcdir)/Tcov/zero \
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+ $(top_srcdir)/Matrix/ash219 \
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+ $(top_srcdir)/Matrix/bcsstk01 \
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+ $(top_srcdir)/Matrix/bcsstk16 \
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+ $(top_srcdir)/Matrix/fs_183_1 \
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+ $(top_srcdir)/Matrix/ibm32a \
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+ $(top_srcdir)/Matrix/ibm32b \
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+ $(top_srcdir)/Matrix/lp_afiro \
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+ $(top_srcdir)/Matrix/mbeacxc \
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+ $(top_srcdir)/Matrix/t1 \
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+ $(top_srcdir)/Matrix/west0067
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+
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+check-local: $(check_PROGRAMS) $(MATRICES)
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+# tiny tests
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+ -./cs_demo1 < $(top_srcdir)/Tcov/nil
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+ -./cs_demo1 < $(top_srcdir)/Tcov/zero
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+ -./cs_demo2 < $(top_srcdir)/Tcov/nil
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+ -./cs_demo2 < $(top_srcdir)/Tcov/zero
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+ -./cs_demo3 < $(top_srcdir)/Tcov/nil
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+# test coverage for book:
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+ -./cs_demo1 < $(top_srcdir)/Matrix/t1
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+ -./cs_demo2 < $(top_srcdir)/Matrix/bcsstk01
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+ -./cs_demo2 < $(top_srcdir)/Matrix/fs_183_1
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+ -./cs_demo2 < $(top_srcdir)/Matrix/mbeacxc
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+ -./cs_demo2 < $(top_srcdir)/Matrix/west0067
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+ -./cs_demo2 < $(top_srcdir)/Matrix/lp_afiro
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+ -./cs_demo3 < $(top_srcdir)/Matrix/bcsstk16
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+# other tests
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+ -./cs_demo2 < $(top_srcdir)/Matrix/t1
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+ -./cs_demo2 < $(top_srcdir)/Matrix/ash219
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+ -./cs_demo3 < $(top_srcdir)/Matrix/bcsstk01
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+ -./cs_demo2 < $(top_srcdir)/Matrix/bcsstk16
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+ -./cs_demo2 < $(top_srcdir)/Matrix/ibm32a
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+ -./cs_demo2 < $(top_srcdir)/Matrix/ibm32b
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+endif
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diff --git a/Include/Makefile.am b/Include/Makefile.am
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new file mode 100644
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--- /dev/null
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+++ b/Include/Makefile.am
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@@ -0,0 +1 @@
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+pkginclude_HEADERS = cs.h
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diff --git a/Makefile.am b/Makefile.am
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new file mode 100644
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--- /dev/null
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+++ b/Makefile.am
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@@ -0,0 +1,9 @@
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+ACLOCAL_AMFLAGS = -I m4
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+
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+SUBDIRS = Include Source Matrix Demo Tcov
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+EXTRA_DIST = README.txt Doc/ChangeLog Doc/License.txt Doc/lesser.txt
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+
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+pkgconfig_DATA = csparse.pc
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+
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+CODE_COVERAGE_BRANCH_COVERAGE = 1
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+@CODE_COVERAGE_RULES@
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diff --git a/Matrix/Makefile.am b/Matrix/Makefile.am
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new file mode 100644
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--- /dev/null
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+++ b/Matrix/Makefile.am
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@@ -0,0 +1,11 @@
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+dist_noinst_DATA = \
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+ ash219 \
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+ bcsstk01 \
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+ bcsstk16 \
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+ fs_183_1 \
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+ ibm32a \
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+ ibm32b \
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+ lp_afiro \
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+ mbeacxc \
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+ t1 \
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+ west0067
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diff --git a/Source/Makefile.am b/Source/Makefile.am
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new file mode 100644
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--- /dev/null
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+++ b/Source/Makefile.am
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@@ -0,0 +1,72 @@
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+AM_CPPFLAGS = -I$(top_srcdir)/Include
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+
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+EXTRA_DIST = \
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+ README.txt
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+
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+CSPARSESRC = \
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+ cs_add.c \
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+ cs_amd.c \
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+ cs_chol.c \
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+ cs_cholsol.c \
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+ cs_compress.c \
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+ cs_counts.c \
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+ cs_cumsum.c \
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+ cs_dfs.c \
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+ cs_dmperm.c \
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+ cs_droptol.c \
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+ cs_dropzeros.c \
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+ cs_dupl.c \
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+ cs_entry.c \
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+ cs_ereach.c \
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+ cs_etree.c \
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+ cs_fkeep.c \
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+ cs_gaxpy.c \
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+ cs_happly.c \
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+ cs_house.c \
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+ cs_ipvec.c \
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+ cs_leaf.c \
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+ cs_load.c \
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+ cs_lsolve.c \
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+ cs_ltsolve.c \
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+ cs_lu.c \
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+ cs_lusol.c \
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+ cs_maxtrans.c \
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+ cs_multiply.c \
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+ cs_norm.c \
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+ cs_permute.c \
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+ cs_pinv.c \
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+ cs_post.c \
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+ cs_print.c \
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+ cs_pvec.c \
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+ cs_qr.c \
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+ cs_qrsol.c \
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+ cs_randperm.c \
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+ cs_reach.c \
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+ cs_scatter.c \
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+ cs_scc.c \
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+ cs_schol.c \
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+ cs_spsolve.c \
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+ cs_sqr.c \
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+ cs_symperm.c \
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+ cs_tdfs.c \
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+ cs_transpose.c \
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+ cs_updown.c \
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+ cs_usolve.c \
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+ cs_util.c \
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+ cs_utsolve.c
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+
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+if !CODE_COVERAGE_ENABLED
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+CSPARSESRC += \
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+ cs_malloc.c
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+else
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+CSPARSESRC += \
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+ $(top_srcdir)/Tcov/cstcov_malloc_test.c \
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+ $(top_srcdir)/Tcov/cstcov_malloc_test.h
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+endif
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+
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+lib_LTLIBRARIES = libcsparse.la
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+libcsparse_la_SOURCES = $(CSPARSESRC)
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+libcsparse_la_LIBADD = -lm $(CODE_COVERAGE_LIBS)
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+libcsparse_la_CPPFLAGS = $(AM_CPPFLAGS) $(CODE_COVERAGE_CPPFLAGS)
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+libcsparse_la_CFLAGS = $(AM_CFLAGS) $(CODE_COVERAGE_CFLAGS)
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+libcsparse_la_LDFLAGS = -no-undefined -release $(PACKAGE_VERSION)
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diff --git a/Tcov/Makefile.am b/Tcov/Makefile.am
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new file mode 100644
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--- /dev/null
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+++ b/Tcov/Makefile.am
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@@ -0,0 +1,40 @@
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+AM_CPPFLAGS = -I$(top_srcdir)/Include -I$(top_srcdir)/Demo
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+LDADD = $(top_builddir)/Source/libcsparse.la
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+
|
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+EXTRA_DIST = \
|
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+ README.txt
|
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+
|
||||
+dist_noinst_DATA = \
|
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+ nil \
|
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+ zero
|
||||
+
|
||||
+if CODE_COVERAGE_ENABLED
|
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+check_PROGRAMS = \
|
||||
+ cstcov_test
|
||||
+
|
||||
+cstcov_test_SOURCES = cstcov_test.c
|
||||
+cstcov_test_LDADD = $(top_builddir)/Demo/libcs_demo.la $(LDADD)
|
||||
+
|
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+MATRICES = \
|
||||
+ $(top_srcdir)/Tcov/nil \
|
||||
+ $(top_srcdir)/Tcov/zero \
|
||||
+ $(top_srcdir)/Matrix/ash219 \
|
||||
+ $(top_srcdir)/Matrix/bcsstk01 \
|
||||
+ $(top_srcdir)/Matrix/fs_183_1 \
|
||||
+ $(top_srcdir)/Matrix/lp_afiro \
|
||||
+ $(top_srcdir)/Matrix/t1 \
|
||||
+ $(top_srcdir)/Matrix/west0067
|
||||
+
|
||||
+check-local: $(check_PROGRAMS) $(MATRICES)
|
||||
+# exhaustive memory tests
|
||||
+ -./cstcov_test $(top_srcdir)/Tcov/nil > test_nil.out
|
||||
+ -./cstcov_test $(top_srcdir)/Tcov/zero > test_zero.out
|
||||
+ -./cstcov_test $(top_srcdir)/Matrix/t1 > test_t1.out
|
||||
+ -./cstcov_test $(top_srcdir)/Matrix/bcsstk01 > test_k1.out
|
||||
+ -./cstcov_test $(top_srcdir)/Matrix/fs_183_1 > test_fs.out
|
||||
+ -./cstcov_test $(top_srcdir)/Matrix/west0067 > test_we.out
|
||||
+ -./cstcov_test $(top_srcdir)/Matrix/ash219 > test_ash.out
|
||||
+ -./cstcov_test $(top_srcdir)/Matrix/lp_afiro > test_afiro.out
|
||||
+endif
|
||||
+
|
||||
+CLEANFILES = *.out
|
||||
diff --git a/configure.ac b/configure.ac
|
||||
new file mode 100644
|
||||
--- /dev/null
|
||||
+++ b/configure.ac
|
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@@ -0,0 +1,47 @@
|
||||
+# -*- Autoconf -*-
|
||||
+# Process this file with autoconf to produce a configure script.
|
||||
+
|
||||
+AC_PREREQ([2.69])
|
||||
+AC_INIT([CSparse],[3.1.9],[DrTimothyAldenDavis@gmail.com],[csparse],[http://www.suitesparse.com/])
|
||||
+AC_CONFIG_SRCDIR([Source/cs_print.c])
|
||||
+AC_CONFIG_AUX_DIR([build-aux])
|
||||
+AC_CONFIG_MACRO_DIR([m4])
|
||||
+AC_CONFIG_HEADERS([config.h])
|
||||
+AM_INIT_AUTOMAKE([foreign])
|
||||
+AM_SILENT_RULES([yes])
|
||||
+LT_INIT([disable-static])
|
||||
+
|
||||
+# Checks for programs.
|
||||
+AC_PROG_INSTALL
|
||||
+AC_PROG_CC
|
||||
+AX_CODE_COVERAGE
|
||||
+
|
||||
+AS_VAR_SET([LIBS_SAVED], [$LIBS])
|
||||
+
|
||||
+# Checks for libraries.
|
||||
+AC_CHECK_LIB([m], [sqrt])
|
||||
+
|
||||
+# Checks for header files.
|
||||
+AC_CHECK_HEADERS([limits.h stddef.h stdlib.h])
|
||||
+
|
||||
+# Checks for typedefs, structures, and compiler characteristics.
|
||||
+AC_TYPE_SIZE_T
|
||||
+
|
||||
+# Checks for library functions.
|
||||
+AC_FUNC_MALLOC
|
||||
+AC_FUNC_REALLOC
|
||||
+AC_CHECK_FUNCS([sqrt])
|
||||
+
|
||||
+AS_VAR_SET([LIBS], [$LIBS_SAVED])
|
||||
+
|
||||
+PKG_INSTALLDIR
|
||||
+AC_CONFIG_FILES([
|
||||
+ csparse.pc
|
||||
+ Makefile
|
||||
+ Demo/Makefile
|
||||
+ Include/Makefile
|
||||
+ Matrix/Makefile
|
||||
+ Source/Makefile
|
||||
+ Tcov/Makefile
|
||||
+])
|
||||
+AC_OUTPUT
|
||||
diff --git a/csparse.pc.in b/csparse.pc.in
|
||||
new file mode 100644
|
||||
--- /dev/null
|
||||
+++ b/csparse.pc.in
|
||||
@@ -0,0 +1,12 @@
|
||||
+prefix=@prefix@
|
||||
+exec_prefix=@exec_prefix@
|
||||
+libdir=@libdir@
|
||||
+includedir=@includedir@
|
||||
+
|
||||
+Name: @PACKAGE_NAME@
|
||||
+Description: A concise sparse matrix package
|
||||
+Version: @PACKAGE_VERSION@
|
||||
+URL: @PACKAGE_URL@
|
||||
+Libs: -L${libdir} -lcsparse
|
||||
+Libs.private: -lm
|
||||
+Cflags: -I${includedir}/csparse
|
||||
diff --git a/m4/ax_code_coverage.m4 b/m4/ax_code_coverage.m4
|
||||
new file mode 100644
|
||||
--- /dev/null
|
||||
+++ b/m4/ax_code_coverage.m4
|
||||
@@ -0,0 +1,264 @@
|
||||
+# ===========================================================================
|
||||
+# https://www.gnu.org/software/autoconf-archive/ax_code_coverage.html
|
||||
+# ===========================================================================
|
||||
+#
|
||||
+# SYNOPSIS
|
||||
+#
|
||||
+# AX_CODE_COVERAGE()
|
||||
+#
|
||||
+# DESCRIPTION
|
||||
+#
|
||||
+# Defines CODE_COVERAGE_CPPFLAGS, CODE_COVERAGE_CFLAGS,
|
||||
+# CODE_COVERAGE_CXXFLAGS and CODE_COVERAGE_LIBS which should be included
|
||||
+# in the CPPFLAGS, CFLAGS CXXFLAGS and LIBS/LIBADD variables of every
|
||||
+# build target (program or library) which should be built with code
|
||||
+# coverage support. Also defines CODE_COVERAGE_RULES which should be
|
||||
+# substituted in your Makefile; and $enable_code_coverage which can be
|
||||
+# used in subsequent configure output. CODE_COVERAGE_ENABLED is defined
|
||||
+# and substituted, and corresponds to the value of the
|
||||
+# --enable-code-coverage option, which defaults to being disabled.
|
||||
+#
|
||||
+# Test also for gcov program and create GCOV variable that could be
|
||||
+# substituted.
|
||||
+#
|
||||
+# Note that all optimization flags in CFLAGS must be disabled when code
|
||||
+# coverage is enabled.
|
||||
+#
|
||||
+# Usage example:
|
||||
+#
|
||||
+# configure.ac:
|
||||
+#
|
||||
+# AX_CODE_COVERAGE
|
||||
+#
|
||||
+# Makefile.am:
|
||||
+#
|
||||
+# @CODE_COVERAGE_RULES@
|
||||
+# my_program_LIBS = ... $(CODE_COVERAGE_LIBS) ...
|
||||
+# my_program_CPPFLAGS = ... $(CODE_COVERAGE_CPPFLAGS) ...
|
||||
+# my_program_CFLAGS = ... $(CODE_COVERAGE_CFLAGS) ...
|
||||
+# my_program_CXXFLAGS = ... $(CODE_COVERAGE_CXXFLAGS) ...
|
||||
+#
|
||||
+# This results in a "check-code-coverage" rule being added to any
|
||||
+# Makefile.am which includes "@CODE_COVERAGE_RULES@" (assuming the module
|
||||
+# has been configured with --enable-code-coverage). Running `make
|
||||
+# check-code-coverage` in that directory will run the module's test suite
|
||||
+# (`make check`) and build a code coverage report detailing the code which
|
||||
+# was touched, then print the URI for the report.
|
||||
+#
|
||||
+# In earlier versions of this macro, CODE_COVERAGE_LDFLAGS was defined
|
||||
+# instead of CODE_COVERAGE_LIBS. They are both still defined, but use of
|
||||
+# CODE_COVERAGE_LIBS is preferred for clarity; CODE_COVERAGE_LDFLAGS is
|
||||
+# deprecated. They have the same value.
|
||||
+#
|
||||
+# This code was derived from Makefile.decl in GLib, originally licenced
|
||||
+# under LGPLv2.1+.
|
||||
+#
|
||||
+# LICENSE
|
||||
+#
|
||||
+# Copyright (c) 2012, 2016 Philip Withnall
|
||||
+# Copyright (c) 2012 Xan Lopez
|
||||
+# Copyright (c) 2012 Christian Persch
|
||||
+# Copyright (c) 2012 Paolo Borelli
|
||||
+# Copyright (c) 2012 Dan Winship
|
||||
+# Copyright (c) 2015 Bastien ROUCARIES
|
||||
+#
|
||||
+# This library is free software; you can redistribute it and/or modify it
|
||||
+# under the terms of the GNU Lesser General Public License as published by
|
||||
+# the Free Software Foundation; either version 2.1 of the License, or (at
|
||||
+# your option) any later version.
|
||||
+#
|
||||
+# This library is distributed in the hope that it will be useful, but
|
||||
+# WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser
|
||||
+# General Public License for more details.
|
||||
+#
|
||||
+# You should have received a copy of the GNU Lesser General Public License
|
||||
+# along with this program. If not, see <https://www.gnu.org/licenses/>.
|
||||
+
|
||||
+#serial 24
|
||||
+
|
||||
+AC_DEFUN([AX_CODE_COVERAGE],[
|
||||
+ dnl Check for --enable-code-coverage
|
||||
+ AC_REQUIRE([AC_PROG_SED])
|
||||
+
|
||||
+ # allow to override gcov location
|
||||
+ AC_ARG_WITH([gcov],
|
||||
+ [AS_HELP_STRING([--with-gcov[=GCOV]], [use given GCOV for coverage (GCOV=gcov).])],
|
||||
+ [_AX_CODE_COVERAGE_GCOV_PROG_WITH=$with_gcov],
|
||||
+ [_AX_CODE_COVERAGE_GCOV_PROG_WITH=gcov])
|
||||
+
|
||||
+ AC_MSG_CHECKING([whether to build with code coverage support])
|
||||
+ AC_ARG_ENABLE([code-coverage],
|
||||
+ AS_HELP_STRING([--enable-code-coverage],
|
||||
+ [Whether to enable code coverage support]),,
|
||||
+ enable_code_coverage=no)
|
||||
+
|
||||
+ AM_CONDITIONAL([CODE_COVERAGE_ENABLED], [test x$enable_code_coverage = xyes])
|
||||
+ AC_SUBST([CODE_COVERAGE_ENABLED], [$enable_code_coverage])
|
||||
+ AC_MSG_RESULT($enable_code_coverage)
|
||||
+
|
||||
+ AS_IF([ test "$enable_code_coverage" = "yes" ], [
|
||||
+ # check for gcov
|
||||
+ AC_CHECK_TOOL([GCOV],
|
||||
+ [$_AX_CODE_COVERAGE_GCOV_PROG_WITH],
|
||||
+ [:])
|
||||
+ AS_IF([test "X$GCOV" = "X:"],
|
||||
+ [AC_MSG_ERROR([gcov is needed to do coverage])])
|
||||
+ AC_SUBST([GCOV])
|
||||
+
|
||||
+ dnl Check if gcc is being used
|
||||
+ AS_IF([ test "$GCC" = "no" ], [
|
||||
+ AC_MSG_ERROR([not compiling with gcc, which is required for gcov code coverage])
|
||||
+ ])
|
||||
+
|
||||
+ AC_CHECK_PROG([LCOV], [lcov], [lcov])
|
||||
+ AC_CHECK_PROG([GENHTML], [genhtml], [genhtml])
|
||||
+
|
||||
+ AS_IF([ test -z "$LCOV" ], [
|
||||
+ AC_MSG_ERROR([To enable code coverage reporting you must have lcov installed])
|
||||
+ ])
|
||||
+
|
||||
+ AS_IF([ test -z "$GENHTML" ], [
|
||||
+ AC_MSG_ERROR([Could not find genhtml from the lcov package])
|
||||
+ ])
|
||||
+
|
||||
+ dnl Build the code coverage flags
|
||||
+ dnl Define CODE_COVERAGE_LDFLAGS for backwards compatibility
|
||||
+ CODE_COVERAGE_CPPFLAGS="-DNDEBUG"
|
||||
+ CODE_COVERAGE_CFLAGS="-O0 -g -fprofile-arcs -ftest-coverage"
|
||||
+ CODE_COVERAGE_CXXFLAGS="-O0 -g -fprofile-arcs -ftest-coverage"
|
||||
+ CODE_COVERAGE_LIBS="-lgcov"
|
||||
+ CODE_COVERAGE_LDFLAGS="$CODE_COVERAGE_LIBS"
|
||||
+
|
||||
+ AC_SUBST([CODE_COVERAGE_CPPFLAGS])
|
||||
+ AC_SUBST([CODE_COVERAGE_CFLAGS])
|
||||
+ AC_SUBST([CODE_COVERAGE_CXXFLAGS])
|
||||
+ AC_SUBST([CODE_COVERAGE_LIBS])
|
||||
+ AC_SUBST([CODE_COVERAGE_LDFLAGS])
|
||||
+
|
||||
+ [CODE_COVERAGE_RULES_CHECK='
|
||||
+ -$(A''M_V_at)$(MAKE) $(AM_MAKEFLAGS) -k check
|
||||
+ $(A''M_V_at)$(MAKE) $(AM_MAKEFLAGS) code-coverage-capture
|
||||
+']
|
||||
+ [CODE_COVERAGE_RULES_CAPTURE='
|
||||
+ $(code_coverage_v_lcov_cap)$(LCOV) $(code_coverage_quiet) $(addprefix --directory ,$(CODE_COVERAGE_DIRECTORY)) --capture --output-file "$(CODE_COVERAGE_OUTPUT_FILE).tmp" --test-name "$(call code_coverage_sanitize,$(PACKAGE_NAME)-$(PACKAGE_VERSION))" --no-checksum --compat-libtool $(CODE_COVERAGE_LCOV_SHOPTS) $(CODE_COVERAGE_LCOV_OPTIONS)
|
||||
+ $(code_coverage_v_lcov_ign)$(LCOV) $(code_coverage_quiet) $(addprefix --directory ,$(CODE_COVERAGE_DIRECTORY)) --remove "$(CODE_COVERAGE_OUTPUT_FILE).tmp" "/tmp/*" $(CODE_COVERAGE_IGNORE_PATTERN) --output-file "$(CODE_COVERAGE_OUTPUT_FILE)" $(CODE_COVERAGE_LCOV_SHOPTS) $(CODE_COVERAGE_LCOV_RMOPTS)
|
||||
+ -@rm -f $(CODE_COVERAGE_OUTPUT_FILE).tmp
|
||||
+ $(code_coverage_v_genhtml)LANG=C $(GENHTML) $(code_coverage_quiet) $(addprefix --prefix ,$(CODE_COVERAGE_DIRECTORY)) --output-directory "$(CODE_COVERAGE_OUTPUT_DIRECTORY)" --title "$(PACKAGE_NAME)-$(PACKAGE_VERSION) Code Coverage" --legend --show-details "$(CODE_COVERAGE_OUTPUT_FILE)" $(CODE_COVERAGE_GENHTML_OPTIONS)
|
||||
+ @echo "file://$(abs_builddir)/$(CODE_COVERAGE_OUTPUT_DIRECTORY)/index.html"
|
||||
+']
|
||||
+ [CODE_COVERAGE_RULES_CLEAN='
|
||||
+clean: code-coverage-clean
|
||||
+distclean: code-coverage-clean
|
||||
+code-coverage-clean:
|
||||
+ -$(LCOV) --directory $(top_builddir) -z
|
||||
+ -rm -rf $(CODE_COVERAGE_OUTPUT_FILE) $(CODE_COVERAGE_OUTPUT_FILE).tmp $(CODE_COVERAGE_OUTPUT_DIRECTORY)
|
||||
+ -find . \( -name "*.gcda" -o -name "*.gcno" -o -name "*.gcov" \) -delete
|
||||
+']
|
||||
+ ], [
|
||||
+ [CODE_COVERAGE_RULES_CHECK='
|
||||
+ @echo "Need to reconfigure with --enable-code-coverage"
|
||||
+']
|
||||
+ CODE_COVERAGE_RULES_CAPTURE="$CODE_COVERAGE_RULES_CHECK"
|
||||
+ CODE_COVERAGE_RULES_CLEAN=''
|
||||
+ ])
|
||||
+
|
||||
+[CODE_COVERAGE_RULES='
|
||||
+# Code coverage
|
||||
+#
|
||||
+# Optional:
|
||||
+# - CODE_COVERAGE_DIRECTORY: Top-level directory for code coverage reporting.
|
||||
+# Multiple directories may be specified, separated by whitespace.
|
||||
+# (Default: $(top_builddir))
|
||||
+# - CODE_COVERAGE_OUTPUT_FILE: Filename and path for the .info file generated
|
||||
+# by lcov for code coverage. (Default:
|
||||
+# $(PACKAGE_NAME)-$(PACKAGE_VERSION)-coverage.info)
|
||||
+# - CODE_COVERAGE_OUTPUT_DIRECTORY: Directory for generated code coverage
|
||||
+# reports to be created. (Default:
|
||||
+# $(PACKAGE_NAME)-$(PACKAGE_VERSION)-coverage)
|
||||
+# - CODE_COVERAGE_BRANCH_COVERAGE: Set to 1 to enforce branch coverage,
|
||||
+# set to 0 to disable it and leave empty to stay with the default.
|
||||
+# (Default: empty)
|
||||
+# - CODE_COVERAGE_LCOV_SHOPTS_DEFAULT: Extra options shared between both lcov
|
||||
+# instances. (Default: based on $CODE_COVERAGE_BRANCH_COVERAGE)
|
||||
+# - CODE_COVERAGE_LCOV_SHOPTS: Extra options to shared between both lcov
|
||||
+# instances. (Default: $CODE_COVERAGE_LCOV_SHOPTS_DEFAULT)
|
||||
+# - CODE_COVERAGE_LCOV_OPTIONS_GCOVPATH: --gcov-tool pathtogcov
|
||||
+# - CODE_COVERAGE_LCOV_OPTIONS_DEFAULT: Extra options to pass to the
|
||||
+# collecting lcov instance. (Default: $CODE_COVERAGE_LCOV_OPTIONS_GCOVPATH)
|
||||
+# - CODE_COVERAGE_LCOV_OPTIONS: Extra options to pass to the collecting lcov
|
||||
+# instance. (Default: $CODE_COVERAGE_LCOV_OPTIONS_DEFAULT)
|
||||
+# - CODE_COVERAGE_LCOV_RMOPTS_DEFAULT: Extra options to pass to the filtering
|
||||
+# lcov instance. (Default: empty)
|
||||
+# - CODE_COVERAGE_LCOV_RMOPTS: Extra options to pass to the filtering lcov
|
||||
+# instance. (Default: $CODE_COVERAGE_LCOV_RMOPTS_DEFAULT)
|
||||
+# - CODE_COVERAGE_GENHTML_OPTIONS_DEFAULT: Extra options to pass to the
|
||||
+# genhtml instance. (Default: based on $CODE_COVERAGE_BRANCH_COVERAGE)
|
||||
+# - CODE_COVERAGE_GENHTML_OPTIONS: Extra options to pass to the genhtml
|
||||
+# instance. (Default: $CODE_COVERAGE_GENHTML_OPTIONS_DEFAULT)
|
||||
+# - CODE_COVERAGE_IGNORE_PATTERN: Extra glob pattern of files to ignore
|
||||
+#
|
||||
+# The generated report will be titled using the $(PACKAGE_NAME) and
|
||||
+# $(PACKAGE_VERSION). In order to add the current git hash to the title,
|
||||
+# use the git-version-gen script, available online.
|
||||
+
|
||||
+# Optional variables
|
||||
+CODE_COVERAGE_DIRECTORY ?= $(top_builddir)
|
||||
+CODE_COVERAGE_OUTPUT_FILE ?= $(PACKAGE_NAME)-$(PACKAGE_VERSION)-coverage.info
|
||||
+CODE_COVERAGE_OUTPUT_DIRECTORY ?= $(PACKAGE_NAME)-$(PACKAGE_VERSION)-coverage
|
||||
+CODE_COVERAGE_BRANCH_COVERAGE ?=
|
||||
+CODE_COVERAGE_LCOV_SHOPTS_DEFAULT ?= $(if $(CODE_COVERAGE_BRANCH_COVERAGE),\
|
||||
+--rc lcov_branch_coverage=$(CODE_COVERAGE_BRANCH_COVERAGE))
|
||||
+CODE_COVERAGE_LCOV_SHOPTS ?= $(CODE_COVERAGE_LCOV_SHOPTS_DEFAULT)
|
||||
+CODE_COVERAGE_LCOV_OPTIONS_GCOVPATH ?= --gcov-tool "$(GCOV)"
|
||||
+CODE_COVERAGE_LCOV_OPTIONS_DEFAULT ?= $(CODE_COVERAGE_LCOV_OPTIONS_GCOVPATH)
|
||||
+CODE_COVERAGE_LCOV_OPTIONS ?= $(CODE_COVERAGE_LCOV_OPTIONS_DEFAULT)
|
||||
+CODE_COVERAGE_LCOV_RMOPTS_DEFAULT ?=
|
||||
+CODE_COVERAGE_LCOV_RMOPTS ?= $(CODE_COVERAGE_LCOV_RMOPTS_DEFAULT)
|
||||
+CODE_COVERAGE_GENHTML_OPTIONS_DEFAULT ?=\
|
||||
+$(if $(CODE_COVERAGE_BRANCH_COVERAGE),\
|
||||
+--rc genhtml_branch_coverage=$(CODE_COVERAGE_BRANCH_COVERAGE))
|
||||
+CODE_COVERAGE_GENHTML_OPTIONS ?= $(CODE_COVERAGE_GENHTML_OPTIONS_DEFAULT)
|
||||
+CODE_COVERAGE_IGNORE_PATTERN ?=
|
||||
+
|
||||
+code_coverage_v_lcov_cap = $(code_coverage_v_lcov_cap_$(V))
|
||||
+code_coverage_v_lcov_cap_ = $(code_coverage_v_lcov_cap_$(AM_DEFAULT_VERBOSITY))
|
||||
+code_coverage_v_lcov_cap_0 = @echo " LCOV --capture"\
|
||||
+ $(CODE_COVERAGE_OUTPUT_FILE);
|
||||
+code_coverage_v_lcov_ign = $(code_coverage_v_lcov_ign_$(V))
|
||||
+code_coverage_v_lcov_ign_ = $(code_coverage_v_lcov_ign_$(AM_DEFAULT_VERBOSITY))
|
||||
+code_coverage_v_lcov_ign_0 = @echo " LCOV --remove /tmp/*"\
|
||||
+ $(CODE_COVERAGE_IGNORE_PATTERN);
|
||||
+code_coverage_v_genhtml = $(code_coverage_v_genhtml_$(V))
|
||||
+code_coverage_v_genhtml_ = $(code_coverage_v_genhtml_$(AM_DEFAULT_VERBOSITY))
|
||||
+code_coverage_v_genhtml_0 = @echo " GEN " $(CODE_COVERAGE_OUTPUT_DIRECTORY);
|
||||
+code_coverage_quiet = $(code_coverage_quiet_$(V))
|
||||
+code_coverage_quiet_ = $(code_coverage_quiet_$(AM_DEFAULT_VERBOSITY))
|
||||
+code_coverage_quiet_0 = --quiet
|
||||
+
|
||||
+# sanitizes the test-name: replaces with underscores: dashes and dots
|
||||
+code_coverage_sanitize = $(subst -,_,$(subst .,_,$(1)))
|
||||
+
|
||||
+# Use recursive makes in order to ignore errors during check
|
||||
+check-code-coverage:'"$CODE_COVERAGE_RULES_CHECK"'
|
||||
+
|
||||
+# Capture code coverage data
|
||||
+code-coverage-capture: code-coverage-capture-hook'"$CODE_COVERAGE_RULES_CAPTURE"'
|
||||
+
|
||||
+# Hook rule executed before code-coverage-capture, overridable by the user
|
||||
+code-coverage-capture-hook:
|
||||
+
|
||||
+'"$CODE_COVERAGE_RULES_CLEAN"'
|
||||
+
|
||||
+GITIGNOREFILES ?=
|
||||
+GITIGNOREFILES += $(CODE_COVERAGE_OUTPUT_FILE) $(CODE_COVERAGE_OUTPUT_DIRECTORY)
|
||||
+
|
||||
+A''M_DISTCHECK_CONFIGURE_FLAGS ?=
|
||||
+A''M_DISTCHECK_CONFIGURE_FLAGS += --disable-code-coverage
|
||||
+
|
||||
+.PHONY: check-code-coverage code-coverage-capture code-coverage-capture-hook code-coverage-clean
|
||||
+']
|
||||
+
|
||||
+ AC_SUBST([CODE_COVERAGE_RULES])
|
||||
+ m4_ifdef([_AM_SUBST_NOTMAKE], [_AM_SUBST_NOTMAKE([CODE_COVERAGE_RULES])])
|
||||
+])
|
||||
|
|
@ -1,213 +0,0 @@
|
|||
diff --git a/Demo/Makefile.am b/Demo/Makefile.am
|
||||
new file mode 100644
|
||||
--- /dev/null
|
||||
+++ b/Demo/Makefile.am
|
||||
@@ -0,0 +1,46 @@
|
||||
+AM_CPPFLAGS = -I$(top_srcdir)/Include
|
||||
+LDADD = $(top_builddir)/Source/libcsparse.la
|
||||
+
|
||||
+EXTRA_DIST = \
|
||||
+ README.txt \
|
||||
+ cs_demo.out
|
||||
+
|
||||
+# Disable the .out implicit pattern rule. Prevents GNU make from
|
||||
+# adding bogus dependencies for the .out files listed above.
|
||||
+%.out: %
|
||||
+
|
||||
+noinst_HEADERS = \
|
||||
+ cs_demo.h
|
||||
+
|
||||
+check_PROGRAMS = \
|
||||
+ cs_demo1 \
|
||||
+ cs_demo2 \
|
||||
+ cs_demo3
|
||||
+
|
||||
+cs_demo1_SOURCES = cs_demo1.c
|
||||
+cs_demo2_SOURCES = cs_demo2.c cs_demo.c
|
||||
+cs_demo3_SOURCES = cs_demo3.c cs_demo.c
|
||||
+
|
||||
+MATRICES = \
|
||||
+ $(top_srcdir)/Matrix/ash219 \
|
||||
+ $(top_srcdir)/Matrix/bcsstk01 \
|
||||
+ $(top_srcdir)/Matrix/bcsstk01 \
|
||||
+ $(top_srcdir)/Matrix/bcsstk16 \
|
||||
+ $(top_srcdir)/Matrix/fs_183_1 \
|
||||
+ $(top_srcdir)/Matrix/lp_afiro \
|
||||
+ $(top_srcdir)/Matrix/mbeacxc \
|
||||
+ $(top_srcdir)/Matrix/t1 \
|
||||
+ $(top_srcdir)/Matrix/west0067
|
||||
+
|
||||
+check-local: $(check_PROGRAMS) $(MATRICES)
|
||||
+ -./cs_demo1 < $(top_srcdir)/Matrix/t1
|
||||
+ -./cs_demo2 < $(top_srcdir)/Matrix/t1
|
||||
+ -./cs_demo2 < $(top_srcdir)/Matrix/ash219
|
||||
+ -./cs_demo2 < $(top_srcdir)/Matrix/bcsstk01
|
||||
+ -./cs_demo2 < $(top_srcdir)/Matrix/fs_183_1
|
||||
+ -./cs_demo2 < $(top_srcdir)/Matrix/mbeacxc
|
||||
+ -./cs_demo2 < $(top_srcdir)/Matrix/west0067
|
||||
+ -./cs_demo2 < $(top_srcdir)/Matrix/lp_afiro
|
||||
+ -./cs_demo2 < $(top_srcdir)/Matrix/bcsstk16
|
||||
+ -./cs_demo3 < $(top_srcdir)/Matrix/bcsstk01
|
||||
+ -./cs_demo3 < $(top_srcdir)/Matrix/bcsstk16
|
||||
diff --git a/Include/Makefile.am b/Include/Makefile.am
|
||||
new file mode 100644
|
||||
--- /dev/null
|
||||
+++ b/Include/Makefile.am
|
||||
@@ -0,0 +1 @@
|
||||
+pkginclude_HEADERS = cs.h
|
||||
diff --git a/Makefile.am b/Makefile.am
|
||||
new file mode 100644
|
||||
--- /dev/null
|
||||
+++ b/Makefile.am
|
||||
@@ -0,0 +1,4 @@
|
||||
+SUBDIRS = Include Source Matrix Demo
|
||||
+EXTRA_DIST = README.txt Doc/ChangeLog Doc/License.txt Doc/lesser.txt
|
||||
+
|
||||
+pkgconfig_DATA = csparse.pc
|
||||
diff --git a/Matrix/Makefile.am b/Matrix/Makefile.am
|
||||
new file mode 100644
|
||||
--- /dev/null
|
||||
+++ b/Matrix/Makefile.am
|
||||
@@ -0,0 +1,11 @@
|
||||
+dist_noinst_DATA = \
|
||||
+ ash219 \
|
||||
+ bcsstk01 \
|
||||
+ bcsstk16 \
|
||||
+ fs_183_1 \
|
||||
+ ibm32a \
|
||||
+ ibm32b \
|
||||
+ lp_afiro \
|
||||
+ mbeacxc \
|
||||
+ t1 \
|
||||
+ west0067
|
||||
diff --git a/Source/Makefile.am b/Source/Makefile.am
|
||||
new file mode 100644
|
||||
--- /dev/null
|
||||
+++ b/Source/Makefile.am
|
||||
@@ -0,0 +1,62 @@
|
||||
+AM_CPPFLAGS = -I$(top_srcdir)/Include
|
||||
+
|
||||
+EXTRA_DIST = \
|
||||
+ README.txt
|
||||
+
|
||||
+CSPARSESRC = \
|
||||
+ cs_add.c \
|
||||
+ cs_amd.c \
|
||||
+ cs_chol.c \
|
||||
+ cs_cholsol.c \
|
||||
+ cs_compress.c \
|
||||
+ cs_counts.c \
|
||||
+ cs_cumsum.c \
|
||||
+ cs_dfs.c \
|
||||
+ cs_dmperm.c \
|
||||
+ cs_droptol.c \
|
||||
+ cs_dropzeros.c \
|
||||
+ cs_dupl.c \
|
||||
+ cs_entry.c \
|
||||
+ cs_ereach.c \
|
||||
+ cs_etree.c \
|
||||
+ cs_fkeep.c \
|
||||
+ cs_gaxpy.c \
|
||||
+ cs_happly.c \
|
||||
+ cs_house.c \
|
||||
+ cs_ipvec.c \
|
||||
+ cs_leaf.c \
|
||||
+ cs_load.c \
|
||||
+ cs_lsolve.c \
|
||||
+ cs_ltsolve.c \
|
||||
+ cs_lu.c \
|
||||
+ cs_lusol.c \
|
||||
+ cs_malloc.c \
|
||||
+ cs_maxtrans.c \
|
||||
+ cs_multiply.c \
|
||||
+ cs_norm.c \
|
||||
+ cs_permute.c \
|
||||
+ cs_pinv.c \
|
||||
+ cs_post.c \
|
||||
+ cs_print.c \
|
||||
+ cs_pvec.c \
|
||||
+ cs_qr.c \
|
||||
+ cs_qrsol.c \
|
||||
+ cs_randperm.c \
|
||||
+ cs_reach.c \
|
||||
+ cs_scatter.c \
|
||||
+ cs_scc.c \
|
||||
+ cs_schol.c \
|
||||
+ cs_spsolve.c \
|
||||
+ cs_sqr.c \
|
||||
+ cs_symperm.c \
|
||||
+ cs_tdfs.c \
|
||||
+ cs_transpose.c \
|
||||
+ cs_updown.c \
|
||||
+ cs_usolve.c \
|
||||
+ cs_util.c \
|
||||
+ cs_utsolve.c
|
||||
+
|
||||
+lib_LTLIBRARIES = libcsparse.la
|
||||
+libcsparse_la_SOURCES = $(CSPARSESRC)
|
||||
+libcsparse_la_LIBADD = -lm
|
||||
+libcsparse_la_LDFLAGS = -no-undefined -release $(PACKAGE_VERSION)
|
||||
diff --git a/configure.ac b/configure.ac
|
||||
new file mode 100644
|
||||
--- /dev/null
|
||||
+++ b/configure.ac
|
||||
@@ -0,0 +1,42 @@
|
||||
+# -*- Autoconf -*-
|
||||
+# Process this file with autoconf to produce a configure script.
|
||||
+
|
||||
+AC_PREREQ([2.69])
|
||||
+AC_INIT([CSparse],[3.1.9],[DrTimothyAldenDavis@gmail.com],[csparse],[http://www.suitesparse.com/])
|
||||
+AC_CONFIG_SRCDIR([Source/cs_print.c])
|
||||
+AC_CONFIG_HEADERS([config.h])
|
||||
+AM_INIT_AUTOMAKE([foreign])
|
||||
+LT_INIT
|
||||
+
|
||||
+# Checks for programs.
|
||||
+AC_PROG_INSTALL
|
||||
+AC_PROG_CC
|
||||
+
|
||||
+AS_VAR_SET([LIBS_SAVED], [$LIBS])
|
||||
+
|
||||
+# Checks for libraries.
|
||||
+AC_CHECK_LIB([m], [sqrt])
|
||||
+
|
||||
+# Checks for header files.
|
||||
+AC_CHECK_HEADERS([limits.h stddef.h stdlib.h])
|
||||
+
|
||||
+# Checks for typedefs, structures, and compiler characteristics.
|
||||
+AC_TYPE_SIZE_T
|
||||
+
|
||||
+# Checks for library functions.
|
||||
+AC_FUNC_MALLOC
|
||||
+AC_FUNC_REALLOC
|
||||
+AC_CHECK_FUNCS([sqrt])
|
||||
+
|
||||
+AS_VAR_SET([LIBS], [$LIBS_SAVED])
|
||||
+
|
||||
+PKG_INSTALLDIR
|
||||
+AC_CONFIG_FILES([
|
||||
+ csparse.pc
|
||||
+ Makefile
|
||||
+ Demo/Makefile
|
||||
+ Include/Makefile
|
||||
+ Matrix/Makefile
|
||||
+ Source/Makefile
|
||||
+])
|
||||
+AC_OUTPUT
|
||||
diff --git a/csparse.pc.in b/csparse.pc.in
|
||||
new file mode 100644
|
||||
--- /dev/null
|
||||
+++ b/csparse.pc.in
|
||||
@@ -0,0 +1,12 @@
|
||||
+prefix=@prefix@
|
||||
+exec_prefix=@exec_prefix@
|
||||
+libdir=@libdir@
|
||||
+includedir=@includedir@
|
||||
+
|
||||
+Name: @PACKAGE_NAME@
|
||||
+Description: A concise sparse matrix package
|
||||
+Version: @PACKAGE_VERSION@
|
||||
+URL: @PACKAGE_URL@
|
||||
+Libs: -L${libdir} -lcsparse
|
||||
+Libs.private: -lm
|
||||
+Cflags: -I${includedir}/csparse
|
||||
Loading…
Reference in a new issue