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15 lines
729 B
Text
15 lines
729 B
Text
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CEAS: Cis-regulatory Element Annotation System
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This is a tool designed to characterize genome-wide protein-DNA
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interaction patterns from ChIP-chip and ChIP-Seq of both sharp and
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broad binding factors. As a stand-alone extension of our web
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application CEAS, it provides statistics on ChIP enrichment at
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important genome features such as specific chromosome, promoters, gene
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bodies, or exons, and infers genes most likely to be regulated by a
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binding factor. CEAS also enables biologists to visualize the average
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ChIP enrichment signals over specific genomic features, allowing
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continuous and broad ChIP enrichment to be perceived which might be
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too subtle to detect from ChIP peaks alone.
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A recommended package to install is R.
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